RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 TOMM7Q9P0U1 55 aa5.68□□□□□ -1.5
SSBP1-209ENST00000473783 UMAD1C9J7I0 102 aa5.67□□□□□ -1.5
SSBP1-209ENST00000473783 F8VRH5 84 aa5.67□□□□□ -1.5
SSBP1-209ENST00000473783 Q5BKY6 102 aa5.67□□□□□ -1.5
SSBP1-209ENST00000473783 NRACQ8N912 160 aa5.67□□□□□ -1.5
SSBP1-209ENST00000473783 BORCS7Q96B45 105 aa5.67□□□□□ -1.5
SSBP1-209ENST00000473783 TMEM126AQ9H061 195 aa5.67□□□□□ -1.5
SSBP1-209ENST00000473783 FXYD6-FXYD2A0A087WZ82 144 aa5.66□□□□□ -1.5
SSBP1-209ENST00000473783 Q6ZN92 141 aa5.66□□□□□ -1.5
SSBP1-209ENST00000473783 AMN1Q8IY45 258 aa5.66□□□□□ -1.5
SSBP1-209ENST00000473783 GNG13Q9P2W3 67 aa5.66□□□□□ -1.5
SSBP1-209ENST00000473783 ZNF706Q9Y5V0 76 aaPredicted RBP5.66□□□□□ -1.5
SSBP1-209ENST00000473783 SMKR1H3BMG3 65 aa5.65□□□□□ -1.5
SSBP1-209ENST00000473783 PDE6DO43924 150 aa5.65□□□□□ -1.5
SSBP1-209ENST00000473783 ALKBH7Q9BT30 221 aaPredicted RBP5.65□□□□□ -1.5
SSBP1-209ENST00000473783 HIGD2AQ9BW72 106 aa5.65□□□□□ -1.5
SSBP1-209ENST00000473783 A8MWL6 223 aa5.64□□□□□ -1.51
SSBP1-209ENST00000473783 KRTAP6-3Q3LI67 103 aa5.64□□□□□ -1.51
SSBP1-209ENST00000473783 KRTAP4-12Q9BQ66 201 aa5.64□□□□□ -1.51
SSBP1-209ENST00000473783 GEMIN7Q9H840 131 aaKnown RBP5.64□□□□□ -1.51
SSBP1-209ENST00000473783 MED9Q9NWA0 146 aa5.64□□□□□ -1.51
SSBP1-209ENST00000473783 A0A1B0GUT8 65 aa5.63□□□□□ -1.51
SSBP1-209ENST00000473783 TMEM238C9JI98 176 aa5.63□□□□□ -1.51
SSBP1-209ENST00000473783 K7EN84 100 aa5.63□□□□□ -1.51
SSBP1-209ENST00000473783 M0R378 163 aa5.63□□□□□ -1.51
SSBP1-209ENST00000473783 LCE3BQ5TA77 95 aa5.63□□□□□ -1.51
SSBP1-209ENST00000473783 LINC00299Q6ZSB3 139 aa5.63□□□□□ -1.51
SSBP1-209ENST00000473783 S100ZQ8WXG8 99 aa5.63□□□□□ -1.51
SSBP1-209ENST00000473783 C20orf78Q9BR46 151 aa5.63□□□□□ -1.51
SSBP1-209ENST00000473783 KRTAP9-8Q9BYQ0 159 aa5.63□□□□□ -1.51
SSBP1-209ENST00000473783 GIPP09681 153 aaPredicted RBP5.62□□□□□ -1.51
SSBP1-209ENST00000473783 IFI27P40305 119 aaPredicted RBP5.62□□□□□ -1.51
SSBP1-209ENST00000473783 CXCL5P42830 114 aa5.62□□□□□ -1.51
SSBP1-209ENST00000473783 IFITM3Q01628 133 aa5.62□□□□□ -1.51
SSBP1-209ENST00000473783 ANKRD39Q53RE8 183 aa5.62□□□□□ -1.51
SSBP1-209ENST00000473783 GATCO43716 136 aaKnown RBP5.61□□□□□ -1.51
SSBP1-209ENST00000473783 SCO1O75880 301 aa5.61□□□□□ -1.51
SSBP1-209ENST00000473783 CT83Q5H943 113 aa5.61□□□□□ -1.51
SSBP1-209ENST00000473783 LINC01551Q86U37 167 aa5.61□□□□□ -1.51
SSBP1-209ENST00000473783 TMEM141Q96I45 108 aa5.61□□□□□ -1.51
SSBP1-209ENST00000473783 PYGO1Q9Y3Y4 419 aa5.61□□□□□ -1.51
SSBP1-209ENST00000473783 IGLV4-3A0A075B6K6 122 aa5.6□□□□□ -1.51
SSBP1-209ENST00000473783 TRBV24-1A0A075B6N3 115 aa5.6□□□□□ -1.51
SSBP1-209ENST00000473783 TEX43Q6ZNM6 134 aa5.6□□□□□ -1.51
SSBP1-209ENST00000473783 OCC1Q8TAD7 63 aa5.6□□□□□ -1.51
SSBP1-209ENST00000473783 SMIM2Q9BVW6 85 aa5.6□□□□□ -1.51
SSBP1-209ENST00000473783 LINC00846Q9NV44 126 aa5.6□□□□□ -1.51
SSBP1-209ENST00000473783 HIGD1CA8MV81 97 aa5.59□□□□□ -1.51
SSBP1-209ENST00000473783 FAM231DQ6ZW35 169 aa5.59□□□□□ -1.51
SSBP1-209ENST00000473783 SSBP3-AS1Q7Z2R9 100 aa5.59□□□□□ -1.51
SSBP1-209ENST00000473783 ANAPC16Q96DE5 110 aa5.59□□□□□ -1.51
SSBP1-209ENST00000473783 C2orf88Q9BSF0 95 aa5.59□□□□□ -1.51
SSBP1-209ENST00000473783 LINC00862A6NCI5 91 aa5.58□□□□□ -1.52
SSBP1-209ENST00000473783 ARPC5O15511 151 aa5.58□□□□□ -1.52
SSBP1-209ENST00000473783 EIF5A2Q9GZV4 153 aaKnown RBP5.58□□□□□ -1.52
SSBP1-209ENST00000473783 C9orf92A6NGG3 77 aa5.57□□□□□ -1.52
SSBP1-209ENST00000473783 MOBPQ13875 183 aa5.57□□□□□ -1.52
SSBP1-209ENST00000473783 TEX46H3BTG2 121 aa5.56□□□□□ -1.52
SSBP1-209ENST00000473783 VPREB1P12018 145 aa5.56□□□□□ -1.52
SSBP1-209ENST00000473783 MRPL51Q4U2R6 128 aaKnown RBP5.56□□□□□ -1.52
SSBP1-209ENST00000473783 LINC00483Q53H64 154 aa5.56□□□□□ -1.52
SSBP1-209ENST00000473783 FAM19A3Q7Z5A8 133 aa5.56□□□□□ -1.52
SSBP1-209ENST00000473783 KRTAP9-9Q9BYP9 154 aa5.56□□□□□ -1.52
SSBP1-209ENST00000473783 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
SSBP1-209ENST00000473783 HERVK_113P63121 156 aa5.55□□□□□ -1.52
SSBP1-209ENST00000473783 RIGQ13278 110 aa5.55□□□□□ -1.52
SSBP1-209ENST00000473783 FAM104BQ5XKR9 115 aa5.55□□□□□ -1.52
SSBP1-209ENST00000473783 CKS2P33552 79 aa5.54□□□□□ -1.52
SSBP1-209ENST00000473783 RAB5BP61020 215 aa5.54□□□□□ -1.52
SSBP1-209ENST00000473783 AMELXQ99217 191 aa5.54□□□□□ -1.52
SSBP1-209ENST00000473783 CDKN2A-AS1Q9UH64 79 aa5.54□□□□□ -1.52
SSBP1-209ENST00000473783 IGLV9-49A0A0B4J1Y8 123 aa5.53□□□□□ -1.52
SSBP1-209ENST00000473783 RAB5AP20339 215 aa5.53□□□□□ -1.52
SSBP1-209ENST00000473783 SEC11AP67812 179 aa5.53□□□□□ -1.52
SSBP1-209ENST00000473783 RPL24P83731 157 aaKnown RBP5.53□□□□□ -1.52
SSBP1-209ENST00000473783 C2orf66Q6UXQ4 117 aa5.53□□□□□ -1.52
SSBP1-209ENST00000473783 ZNF345Q14585 488 aa5.52□□□□□ -1.53
SSBP1-209ENST00000473783 ZC2HC1BQ5TFG8 222 aa5.52□□□□□ -1.53
SSBP1-209ENST00000473783 AKAP14Q86UN6 197 aa5.52□□□□□ -1.53
SSBP1-209ENST00000473783 VCX2Q9H322 139 aa5.52□□□□□ -1.53
SSBP1-209ENST00000473783 SMIM1B2RUZ4 78 aa5.51□□□□□ -1.53
SSBP1-209ENST00000473783 IGLV6-57P01721 117 aa5.51□□□□□ -1.53
SSBP1-209ENST00000473783 TAGLN2P37802 199 aaKnown RBP5.51□□□□□ -1.53
SSBP1-209ENST00000473783 RPL37P61927 97 aaKnown RBP5.51□□□□□ -1.53
SSBP1-209ENST00000473783 KRTAP19-6Q3LI70 58 aa5.51□□□□□ -1.53
SSBP1-209ENST00000473783 SMCR5Q8TEV8 140 aa5.51□□□□□ -1.53
SSBP1-209ENST00000473783 COX7B2Q8TF08 81 aa5.51□□□□□ -1.53
SSBP1-209ENST00000473783 NDUFA13Q9P0J0 144 aa5.51□□□□□ -1.53
SSBP1-209ENST00000473783 NPYP01303 97 aa5.5□□□□□ -1.53
SSBP1-209ENST00000473783 NPSP0C0P6 89 aa5.5□□□□□ -1.53
SSBP1-209ENST00000473783 KRTAP20-1Q3LI63 56 aa5.5□□□□□ -1.53
SSBP1-209ENST00000473783 PDZD11Q5EBL8 140 aa5.5□□□□□ -1.53
SSBP1-209ENST00000473783 GAGE2AQ6NT46 116 aa5.5□□□□□ -1.53
SSBP1-209ENST00000473783 Q6Q795 121 aa5.5□□□□□ -1.53
SSBP1-209ENST00000473783 D6R8Y8 96 aa5.49□□□□□ -1.53
SSBP1-209ENST00000473783 MT2AP02795 61 aa5.49□□□□□ -1.53
SSBP1-209ENST00000473783 CYSLTR1Q9Y271 337 aa5.49□□□□□ -1.53
SSBP1-209ENST00000473783 MUC12Q9UKN1 5478 aa5.48□□□□□ -1.53
SSBP1-209ENST00000473783 LIMD2Q9BT23 127 aa5.48□□□□□ -1.53
SSBP1-209ENST00000473783 SND1-IT1Q9HBX3 110 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms