RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 DNAH5Q8TE73 4624 aa12.81□□□□□ -0.36
SF1-213ENST00000472725 DPM2O94777 84 aa12.8□□□□□ -0.36
SF1-213ENST00000472725 TLX1NBP0CAT3 122 aa12.8□□□□□ -0.36
SF1-213ENST00000472725 XGP55808 180 aa12.8□□□□□ -0.36
SF1-213ENST00000472725 SFTA2Q6UW10 78 aa12.8□□□□□ -0.36
SF1-213ENST00000472725 PET117Q6UWS5 81 aa12.8□□□□□ -0.36
SF1-213ENST00000472725 TMEM223A0PJW6 202 aa12.79□□□□□ -0.36
SF1-213ENST00000472725 C10orf25Q5T742 122 aa12.79□□□□□ -0.36
SF1-213ENST00000472725 C6orf48Q9UBA6 75 aa12.79□□□□□ -0.36
SF1-213ENST00000472725 BIRC6Q9NR09 4857 aa12.79□□□□□ -0.36
SF1-213ENST00000472725 IGKCP01834 107 aa12.78□□□□□ -0.36
SF1-213ENST00000472725 C2orf82Q6UX34 121 aa12.78□□□□□ -0.36
SF1-213ENST00000472725 S100A2P29034 98 aa12.77□□□□□ -0.37
SF1-213ENST00000472725 HIST3H2BBQ8N257 126 aa12.77□□□□□ -0.37
SF1-213ENST00000472725 LRP1BQ9NZR2 4599 aa12.76□□□□□ -0.37
SF1-213ENST00000472725 C3orf79P0CE67 100 aa12.76□□□□□ -0.37
SF1-213ENST00000472725 LINC01545Q5VT33 79 aa12.76□□□□□ -0.37
SF1-213ENST00000472725 SPACA4Q8TDM5 124 aa12.76□□□□□ -0.37
SF1-213ENST00000472725 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.76□□□□□ -0.37
SF1-213ENST00000472725 AKR1D1P51857 326 aa12.75□□□□□ -0.37
SF1-213ENST00000472725 A0A096LNI7 61 aa12.74□□□□□ -0.37
SF1-213ENST00000472725 PTTG1IPP53801 180 aa12.74□□□□□ -0.37
SF1-213ENST00000472725 HERVK_113P61574 105 aa12.74□□□□□ -0.37
SF1-213ENST00000472725 SCXQ7RTU7 201 aa12.74□□□□□ -0.37
SF1-213ENST00000472725 NDUFC2-KCTD14E9PQ53 114 aa12.73□□□□□ -0.37
SF1-213ENST00000472725 CIRBP-AS1Q8TBR5 109 aa12.73□□□□□ -0.37
SF1-213ENST00000472725 C20orf202A1L168 122 aa12.72□□□□□ -0.37
SF1-213ENST00000472725 KRTDAPP60985 99 aa12.72□□□□□ -0.37
SF1-213ENST00000472725 DPH3Q96FX2 82 aa12.72□□□□□ -0.37
SF1-213ENST00000472725 HIST1H2BLQ99880 126 aa12.72□□□□□ -0.37
SF1-213ENST00000472725 PMCHL2Q9BQD1 86 aa12.72□□□□□ -0.37
SF1-213ENST00000472725 IGKV2-24A0A0C4DH68 120 aa12.71□□□□□ -0.37
SF1-213ENST00000472725 C5orf52A6NGY3 159 aa12.71□□□□□ -0.37
SF1-213ENST00000472725 PANO1I0J062 215 aa12.71□□□□□ -0.37
SF1-213ENST00000472725 CHTF8P0CG12 524 aa12.71□□□□□ -0.37
SF1-213ENST00000472725 RPL18AQ02543 176 aaKnown RBP12.71□□□□□ -0.37
SF1-213ENST00000472725 GAGE2BQ13066 116 aa12.71□□□□□ -0.37
SF1-213ENST00000472725 SNRPEP62304 92 aaKnown RBP12.7□□□□□ -0.38
SF1-213ENST00000472725 MAJINQ3KP22 176 aa12.7□□□□□ -0.38
SF1-213ENST00000472725 PLEKHB2Q96CS7 222 aa12.7□□□□□ -0.38
SF1-213ENST00000472725 PLAC8Q9NZF1 115 aa12.7□□□□□ -0.38
SF1-213ENST00000472725 Q6ZRP5 223 aa12.69□□□□□ -0.38
SF1-213ENST00000472725 A0A087WYN8 130 aa12.68□□□□□ -0.38
SF1-213ENST00000472725 LEPROTO15243 131 aa12.68□□□□□ -0.38
SF1-213ENST00000472725 ZNF625Q96I27 306 aaPredicted RBP12.68□□□□□ -0.38
SF1-213ENST00000472725 COX17Q14061 63 aa12.67□□□□□ -0.38
SF1-213ENST00000472725 C9orf116Q5BN46 136 aaPredicted RBP12.67□□□□□ -0.38
SF1-213ENST00000472725 EPM2AB3EWF7 344 aa12.66□□□□□ -0.38
SF1-213ENST00000472725 HERV-K104P63124 156 aa12.66□□□□□ -0.38
SF1-213ENST00000472725 Q8N1X5 172 aa12.66□□□□□ -0.38
SF1-213ENST00000472725 STPG4Q8N801 248 aa12.66□□□□□ -0.38
SF1-213ENST00000472725 E9PLD3 99 aa12.65□□□□□ -0.38
SF1-213ENST00000472725 HAMPP81172 84 aa12.65□□□□□ -0.38
SF1-213ENST00000472725 LINC00587B1AMM8 73 aa12.64□□□□□ -0.39
SF1-213ENST00000472725 NMUP48645 174 aa12.64□□□□□ -0.39
SF1-213ENST00000472725 KIAA1109Q2LD37 5005 aa12.63□□□□□ -0.39
SF1-213ENST00000472725 MYMXA0A1B0GTQ4 84 aa12.63□□□□□ -0.39
SF1-213ENST00000472725 J3QQQ9 107 aa12.63□□□□□ -0.39
SF1-213ENST00000472725 GAGE2EQ4V326 116 aa12.63□□□□□ -0.39
SF1-213ENST00000472725 GAGE2DQ9UEU5 116 aa12.63□□□□□ -0.39
SF1-213ENST00000472725 NDUFA12Q9UI09 145 aa12.63□□□□□ -0.39
SF1-213ENST00000472725 ERG28Q9UKR5 140 aa12.63□□□□□ -0.39
SF1-213ENST00000472725 FAM229AH3BQW9 127 aa12.62□□□□□ -0.39
SF1-213ENST00000472725 APOBP04114 4563 aaKnown RBP12.62□□□□□ -0.39
SF1-213ENST00000472725 DNAH8Q96JB1 4490 aa12.61□□□□□ -0.39
SF1-213ENST00000472725 LGALS3P17931 250 aaKnown RBP12.61□□□□□ -0.39
SF1-213ENST00000472725 SMR3BP02814 79 aaPredicted RBP12.6□□□□□ -0.39
SF1-213ENST00000472725 A0A1W2PNN7 141 aa12.58□□□□□ -0.4
SF1-213ENST00000472725 PFN2P35080 140 aa12.58□□□□□ -0.4
SF1-213ENST00000472725 TSPEAR-AS2P59090 65 aa12.58□□□□□ -0.4
SF1-213ENST00000472725 C9orf129Q5T035 196 aaKnown RBP12.58□□□□□ -0.4
SF1-213ENST00000472725 LINC00528Q8N1L1 170 aa12.58□□□□□ -0.4
SF1-213ENST00000472725 C7orf33Q8WU49 177 aa12.57□□□□□ -0.4
SF1-213ENST00000472725 RYR1P21817 5038 aa12.57□□□□□ -0.4
SF1-213ENST00000472725 PLA2G1BP04054 148 aaKnown RBP12.56□□□□□ -0.4
SF1-213ENST00000472725 PLA2G2DQ9UNK4 145 aa12.56□□□□□ -0.4
SF1-213ENST00000472725 HSPG2P98160 4391 aa12.56□□□□□ -0.4
SF1-213ENST00000472725 MEIG1Q5JSS6 88 aa12.55□□□□□ -0.4
SF1-213ENST00000472725 Q5VSD8 79 aa12.55□□□□□ -0.4
SF1-213ENST00000472725 XAGE1AQ9HD64 81 aa12.55□□□□□ -0.4
SF1-213ENST00000472725 LINC00158P58513 81 aa12.54□□□□□ -0.4
SF1-213ENST00000472725 SND1-IT1Q9HBX3 110 aa12.52□□□□□ -0.41
SF1-213ENST00000472725 FAM168BA1KXE4 195 aa12.51□□□□□ -0.41
SF1-213ENST00000472725 SMIM13P0DJ93 91 aa12.51□□□□□ -0.41
SF1-213ENST00000472725 FAM19A5Q7Z5A7 132 aaPredicted RBP12.51□□□□□ -0.41
SF1-213ENST00000472725 ATOH7Q8N100 152 aa12.51□□□□□ -0.41
SF1-213ENST00000472725 KRTAP17-1Q9BYP8 105 aa12.51□□□□□ -0.41
SF1-213ENST00000472725 TP73-AS1Q9UF72 201 aa12.51□□□□□ -0.41
SF1-213ENST00000472725 HSBP1L1C9JCN9 74 aa12.5□□□□□ -0.41
SF1-213ENST00000472725 IGLV5-37A0A075B6J1 123 aa12.49□□□□□ -0.41
SF1-213ENST00000472725 IGKV2D-26A0A0A0MRZ7 120 aa12.49□□□□□ -0.41
SF1-213ENST00000472725 SCGB1D1O95968 90 aa12.49□□□□□ -0.41
SF1-213ENST00000472725 RPL37AP61513 92 aaKnown RBP12.49□□□□□ -0.41
SF1-213ENST00000472725 KRTAP7-1Q8IUC3 87 aa12.49□□□□□ -0.41
SF1-213ENST00000472725 A0A0J9YXY3 114 aa12.48□□□□□ -0.41
SF1-213ENST00000472725 M0QXV9 152 aa12.48□□□□□ -0.41
SF1-213ENST00000472725 LBHQ53QV2 105 aaPredicted RBP12.48□□□□□ -0.41
SF1-213ENST00000472725 ANKRD39Q53RE8 183 aa12.48□□□□□ -0.41
SF1-213ENST00000472725 TMA7Q9Y2S6 64 aaKnown RBP12.48□□□□□ -0.41
SF1-213ENST00000472725 ZNF815PA8K554 130 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms