RNA–Protein interactions for RNA: ENST00000472378.1

TSPO-205, Transcript of translocator protein, humanhuman

TSL 2

Gene TSPO, Length 495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-205ENST00000472378 IGLC3P0DOY3 106 aa10.61□□□□□ -0.71
TSPO-205ENST00000472378 C6orf48Q9UBA6 75 aa10.61□□□□□ -0.71
TSPO-205ENST00000472378 SMIM1B2RUZ4 78 aa10.6□□□□□ -0.71
TSPO-205ENST00000472378 F8VRH5 84 aa10.6□□□□□ -0.71
TSPO-205ENST00000472378 C2orf82Q6UX34 121 aa10.6□□□□□ -0.71
TSPO-205ENST00000472378 IFI27L1Q96BM0 104 aa10.6□□□□□ -0.71
TSPO-205ENST00000472378 NDUFC2-KCTD14E9PQ53 114 aa10.59□□□□□ -0.71
TSPO-205ENST00000472378 C10orf25Q5T742 122 aa10.59□□□□□ -0.71
TSPO-205ENST00000472378 COX7B2Q8TF08 81 aa10.59□□□□□ -0.71
TSPO-205ENST00000472378 TRAV12-1A0A0B4J245 112 aa10.58□□□□□ -0.72
TSPO-205ENST00000472378 CHTOPQ9Y3Y2 248 aaKnown RBP10.57□□□□□ -0.72
TSPO-205ENST00000472378 SERF1AO75920 110 aa10.56□□□□□ -0.72
TSPO-205ENST00000472378 SPINK8P0C7L1 97 aa10.56□□□□□ -0.72
TSPO-205ENST00000472378 SFTA2Q6UW10 78 aa10.56□□□□□ -0.72
TSPO-205ENST00000472378 HSPB8Q9UJY1 196 aa10.56□□□□□ -0.72
TSPO-205ENST00000472378 PCLOQ9Y6V0 5065 aa10.56□□□□□ -0.72
TSPO-205ENST00000472378 LEPROTL1O95214 131 aa10.55□□□□□ -0.72
TSPO-205ENST00000472378 GAGE2EQ4V326 116 aa10.55□□□□□ -0.72
TSPO-205ENST00000472378 C9orf116Q5BN46 136 aaPredicted RBP10.55□□□□□ -0.72
TSPO-205ENST00000472378 TMEM170BQ5T4T1 132 aa10.55□□□□□ -0.72
TSPO-205ENST00000472378 Q6ZRP5 223 aa10.55□□□□□ -0.72
TSPO-205ENST00000472378 FAM19A2Q8N3H0 131 aa10.55□□□□□ -0.72
TSPO-205ENST00000472378 GAGE2DQ9UEU5 116 aa10.55□□□□□ -0.72
TSPO-205ENST00000472378 ZNF22P17026 224 aaPredicted RBP10.54□□□□□ -0.72
TSPO-205ENST00000472378 FLG2Q5D862 2391 aaPredicted RBP10.54□□□□□ -0.72
TSPO-205ENST00000472378 IGLV5-39A0A0G2JS06 123 aa10.52□□□□□ -0.73
TSPO-205ENST00000472378 SCO1O75880 301 aa10.52□□□□□ -0.73
TSPO-205ENST00000472378 KRTAP10-4P60372 401 aaPredicted RBP10.52□□□□□ -0.73
TSPO-205ENST00000472378 C11orf86A6NJI1 115 aa10.51□□□□□ -0.73
TSPO-205ENST00000472378 S100A1P23297 94 aa10.51□□□□□ -0.73
TSPO-205ENST00000472378 DNAH8Q96JB1 4490 aa10.51□□□□□ -0.73
TSPO-205ENST00000472378 A0A1W2PNN7 141 aa10.5□□□□□ -0.73
TSPO-205ENST00000472378 PLNP26678 52 aa10.48□□□□□ -0.73
TSPO-205ENST00000472378 PRR3P79522 188 aaKnown RBP10.48□□□□□ -0.73
TSPO-205ENST00000472378 HIST1H2BKO60814 126 aa10.47□□□□□ -0.73
TSPO-205ENST00000472378 HIST1H2BJP06899 126 aa10.47□□□□□ -0.73
TSPO-205ENST00000472378 FABP4P15090 132 aa10.47□□□□□ -0.73
TSPO-205ENST00000472378 HIST1H2BOP23527 126 aa10.47□□□□□ -0.73
TSPO-205ENST00000472378 HIST1H2BBP33778 126 aa10.47□□□□□ -0.73
TSPO-205ENST00000472378 HIST1H2BDP58876 126 aa10.47□□□□□ -0.73
TSPO-205ENST00000472378 LINC00310P59036 64 aa10.47□□□□□ -0.73
TSPO-205ENST00000472378 HIST1H2BCP62807 126 aa10.47□□□□□ -0.73
TSPO-205ENST00000472378 COX17Q14061 63 aa10.47□□□□□ -0.73
TSPO-205ENST00000472378 ODF1Q14990 250 aa10.47□□□□□ -0.73
TSPO-205ENST00000472378 HIST2H2BEQ16778 126 aa10.47□□□□□ -0.73
TSPO-205ENST00000472378 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.47□□□□□ -0.73
TSPO-205ENST00000472378 FAM19A5Q7Z5A7 132 aaPredicted RBP10.47□□□□□ -0.73
TSPO-205ENST00000472378 HIST1H2BHQ93079 126 aa10.47□□□□□ -0.73
TSPO-205ENST00000472378 HIST1H2BNQ99877 126 aa10.47□□□□□ -0.73
TSPO-205ENST00000472378 HIST1H2BMQ99879 126 aa10.47□□□□□ -0.73
TSPO-205ENST00000472378 MAP1LC3CQ9BXW4 147 aa10.47□□□□□ -0.73
TSPO-205ENST00000472378 DMBT1Q9UGM3 2413 aaPredicted RBP10.46□□□□□ -0.73
TSPO-205ENST00000472378 H0Y8G0 127 aa10.46□□□□□ -0.73
TSPO-205ENST00000472378 FAT1Q14517 4588 aa10.45□□□□□ -0.74
TSPO-205ENST00000472378 TMEM223A0PJW6 202 aa10.45□□□□□ -0.74
TSPO-205ENST00000472378 OXTP01178 125 aa10.45□□□□□ -0.74
TSPO-205ENST00000472378 ABCA13Q86UQ4 5058 aa10.45□□□□□ -0.74
TSPO-205ENST00000472378 KRTAP29-1A8MX34 341 aaPredicted RBP10.44□□□□□ -0.74
TSPO-205ENST00000472378 J3QL48 77 aa10.44□□□□□ -0.74
TSPO-205ENST00000472378 M0QXV9 152 aa10.44□□□□□ -0.74
TSPO-205ENST00000472378 NUPR1O60356 82 aa10.44□□□□□ -0.74
TSPO-205ENST00000472378 LBHQ53QV2 105 aaPredicted RBP10.44□□□□□ -0.74
TSPO-205ENST00000472378 C9orf129Q5T035 196 aaKnown RBP10.44□□□□□ -0.74
TSPO-205ENST00000472378 FAM168BA1KXE4 195 aa10.43□□□□□ -0.74
TSPO-205ENST00000472378 DPM2O94777 84 aa10.43□□□□□ -0.74
TSPO-205ENST00000472378 PHF5AQ7RTV0 110 aaKnown RBP10.43□□□□□ -0.74
TSPO-205ENST00000472378 XAGE1AQ9HD64 81 aa10.43□□□□□ -0.74
TSPO-205ENST00000472378 VPS13BQ7Z7G8 4022 aa10.43□□□□□ -0.74
TSPO-205ENST00000472378 LINC00587B1AMM8 73 aa10.42□□□□□ -0.74
TSPO-205ENST00000472378 HERVK_113P61574 105 aa10.42□□□□□ -0.74
TSPO-205ENST00000472378 UBE2BP63146 152 aa10.42□□□□□ -0.74
TSPO-205ENST00000472378 TP73-AS1Q9UF72 201 aa10.42□□□□□ -0.74
TSPO-205ENST00000472378 ERG28Q9UKR5 140 aa10.42□□□□□ -0.74
TSPO-205ENST00000472378 PFN2P35080 140 aa10.41□□□□□ -0.74
TSPO-205ENST00000472378 HERV-K104P63124 156 aa10.41□□□□□ -0.74
TSPO-205ENST00000472378 SPINK6Q6UWN8 80 aa10.41□□□□□ -0.74
TSPO-205ENST00000472378 PLA2G2DQ9UNK4 145 aa10.41□□□□□ -0.74
TSPO-205ENST00000472378 PLEKHB2Q96CS7 222 aa10.4□□□□□ -0.74
TSPO-205ENST00000472378 PSORS1C2Q9UIG4 136 aa10.4□□□□□ -0.74
TSPO-205ENST00000472378 ATP6V1G1O75348 118 aa10.39□□□□□ -0.75
TSPO-205ENST00000472378 IGKCP01834 107 aa10.39□□□□□ -0.75
TSPO-205ENST00000472378 COA6Q5JTJ3 125 aaKnown RBP10.39□□□□□ -0.75
TSPO-205ENST00000472378 ZNF625Q96I27 306 aaPredicted RBP10.39□□□□□ -0.75
TSPO-205ENST00000472378 MYMXA0A1B0GTQ4 84 aa10.38□□□□□ -0.75
TSPO-205ENST00000472378 HNRNPA3P51991 378 aaKnown RBP10.38□□□□□ -0.75
TSPO-205ENST00000472378 C1orf137Q5JT78 98 aa10.38□□□□□ -0.75
TSPO-205ENST00000472378 C22orf24Q9Y442 160 aa10.38□□□□□ -0.75
TSPO-205ENST00000472378 LINC00158P58513 81 aa10.37□□□□□ -0.75
TSPO-205ENST00000472378 RPL24P83731 157 aaKnown RBP10.37□□□□□ -0.75
TSPO-205ENST00000472378 REG3GQ6UW15 175 aa10.37□□□□□ -0.75
TSPO-205ENST00000472378 MRPL55Q7Z7F7 128 aaKnown RBP10.37□□□□□ -0.75
TSPO-205ENST00000472378 NKAPP1Q8N9T2 125 aa10.37□□□□□ -0.75
TSPO-205ENST00000472378 SYS1-DBNDD2H3BUS1 97 aa10.36□□□□□ -0.75
TSPO-205ENST00000472378 LEPROTO15243 131 aa10.36□□□□□ -0.75
TSPO-205ENST00000472378 NDUFA12Q9UI09 145 aa10.36□□□□□ -0.75
TSPO-205ENST00000472378 SERTAD4-AS1Q5TG53 156 aa10.35□□□□□ -0.75
TSPO-205ENST00000472378 PET117Q6UWS5 81 aa10.35□□□□□ -0.75
TSPO-205ENST00000472378 KRTAP7-1Q8IUC3 87 aa10.35□□□□□ -0.75
TSPO-205ENST00000472378 SND1-IT1Q9HBX3 110 aa10.35□□□□□ -0.75
TSPO-205ENST00000472378 IGLV5-37A0A075B6J1 123 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms