RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 CDKN2A-AS1Q9UH64 79 aa5.52□□□□□ -1.53
USF1-204ENST00000472217 UBR4Q5T4S7 5183 aa5.52□□□□□ -1.53
USF1-204ENST00000472217 M0QXV9 152 aa5.51□□□□□ -1.53
USF1-204ENST00000472217 PRSS2P07478 247 aa5.51□□□□□ -1.53
USF1-204ENST00000472217 S100PP25815 95 aa5.51□□□□□ -1.53
USF1-204ENST00000472217 G0S2P27469 103 aa5.51□□□□□ -1.53
USF1-204ENST00000472217 HERVK_113P63121 156 aa5.51□□□□□ -1.53
USF1-204ENST00000472217 C9orf129Q5T035 196 aaKnown RBP5.51□□□□□ -1.53
USF1-204ENST00000472217 Q8IZM0 81 aa5.51□□□□□ -1.53
USF1-204ENST00000472217 GNB1LQ9BYB4 327 aa5.51□□□□□ -1.53
USF1-204ENST00000472217 IGLV7-43P04211 117 aa5.5□□□□□ -1.53
USF1-204ENST00000472217 CKS1BP61024 79 aa5.5□□□□□ -1.53
USF1-204ENST00000472217 SEC11AP67812 179 aa5.5□□□□□ -1.53
USF1-204ENST00000472217 C6orf226Q5I0X4 101 aa5.5□□□□□ -1.53
USF1-204ENST00000472217 ERASQ7Z444 233 aa5.5□□□□□ -1.53
USF1-204ENST00000472217 COMMD7Q86VX2 200 aa5.5□□□□□ -1.53
USF1-204ENST00000472217 SCGB3A1Q96QR1 104 aa5.5□□□□□ -1.53
USF1-204ENST00000472217 ALKBH7Q9BT30 221 aaPredicted RBP5.5□□□□□ -1.53
USF1-204ENST00000472217 GEMIN7Q9H840 131 aaKnown RBP5.5□□□□□ -1.53
USF1-204ENST00000472217 LINC01546A6NGU7 62 aa5.49□□□□□ -1.53
USF1-204ENST00000472217 F8VRH5 84 aa5.48□□□□□ -1.53
USF1-204ENST00000472217 UBE2BP63146 152 aa5.48□□□□□ -1.53
USF1-204ENST00000472217 C10orf91Q5T1B1 145 aa5.48□□□□□ -1.53
USF1-204ENST00000472217 LINC00469Q8N7U9 141 aa5.48□□□□□ -1.53
USF1-204ENST00000472217 DIRC1Q969H9 104 aa5.48□□□□□ -1.53
USF1-204ENST00000472217 MRPL18Q9H0U6 180 aaKnown RBP5.48□□□□□ -1.53
USF1-204ENST00000472217 TINCRA0A1B0GVN0 87 aa5.47□□□□□ -1.53
USF1-204ENST00000472217 LINC01549A6NIU2 74 aa5.47□□□□□ -1.53
USF1-204ENST00000472217 SMIM1B2RUZ4 78 aa5.47□□□□□ -1.53
USF1-204ENST00000472217 H0Y9J4 135 aa5.47□□□□□ -1.53
USF1-204ENST00000472217 RHEBQ15382 184 aa5.47□□□□□ -1.53
USF1-204ENST00000472217 COX19Q49B96 90 aa5.47□□□□□ -1.53
USF1-204ENST00000472217 CST9LQ9H4G1 147 aa5.47□□□□□ -1.53
USF1-204ENST00000472217 XAGE1AQ9HD64 81 aa5.47□□□□□ -1.53
USF1-204ENST00000472217 RPS10P5Q9NQ39 176 aa5.47□□□□□ -1.53
USF1-204ENST00000472217 CARHSP1Q9Y2V2 147 aaKnown RBP5.47□□□□□ -1.53
USF1-204ENST00000472217 IGLV5-45A0A087WSX0 123 aa5.46□□□□□ -1.54
USF1-204ENST00000472217 CXCL5P42830 114 aa5.46□□□□□ -1.54
USF1-204ENST00000472217 FABP9Q0Z7S8 132 aa5.46□□□□□ -1.54
USF1-204ENST00000472217 PDZD11Q5EBL8 140 aa5.46□□□□□ -1.54
USF1-204ENST00000472217 FA2HQ7L5A8 372 aa5.46□□□□□ -1.54
USF1-204ENST00000472217 PRR26Q8N8Z3 221 aa5.46□□□□□ -1.54
USF1-204ENST00000472217 SMCO4Q9NRQ5 59 aa5.46□□□□□ -1.54
USF1-204ENST00000472217 TNXBP22105 4242 aa5.45□□□□□ -1.54
USF1-204ENST00000472217 SPINK8P0C7L1 97 aa5.45□□□□□ -1.54
USF1-204ENST00000472217 PMVKQ15126 192 aa5.45□□□□□ -1.54
USF1-204ENST00000472217 COX7B2Q8TF08 81 aa5.45□□□□□ -1.54
USF1-204ENST00000472217 C22orf24Q9Y442 160 aa5.45□□□□□ -1.54
USF1-204ENST00000472217 A0A096LNJ9 63 aa5.44□□□□□ -1.54
USF1-204ENST00000472217 KRTAP1-4P0C5Y4 121 aa5.44□□□□□ -1.54
USF1-204ENST00000472217 URB1-AS1Q96HZ7 61 aa5.44□□□□□ -1.54
USF1-204ENST00000472217 C18orf32Q8TCD1 76 aa5.43□□□□□ -1.54
USF1-204ENST00000472217 IGLV1-50A0A075B6I6 118 aa5.42□□□□□ -1.54
USF1-204ENST00000472217 LBHQ53QV2 105 aaPredicted RBP5.42□□□□□ -1.54
USF1-204ENST00000472217 MRPL55Q7Z7F7 128 aaKnown RBP5.42□□□□□ -1.54
USF1-204ENST00000472217 TP73-AS1Q9UF72 201 aa5.42□□□□□ -1.54
USF1-204ENST00000472217 TRAPPC1Q9Y5R8 145 aa5.42□□□□□ -1.54
USF1-204ENST00000472217 H3BRM9 83 aa5.41□□□□□ -1.54
USF1-204ENST00000472217 NUPR1O60356 82 aa5.41□□□□□ -1.54
USF1-204ENST00000472217 ZNF861PO60384 105 aa5.41□□□□□ -1.54
USF1-204ENST00000472217 APOC3P02656 99 aa5.41□□□□□ -1.54
USF1-204ENST00000472217 IGLC3P0DOY3 106 aa5.41□□□□□ -1.54
USF1-204ENST00000472217 NDUFA6P56556 154 aa5.41□□□□□ -1.54
USF1-204ENST00000472217 RAB5BP61020 215 aa5.41□□□□□ -1.54
USF1-204ENST00000472217 PMCHL1Q16048 86 aa5.41□□□□□ -1.54
USF1-204ENST00000472217 IGLV5-39A0A0G2JS06 123 aa5.4□□□□□ -1.54
USF1-204ENST00000472217 HBDP02042 147 aa5.4□□□□□ -1.54
USF1-204ENST00000472217 LINC00614P0C842 121 aa5.4□□□□□ -1.54
USF1-204ENST00000472217 ZNF22P17026 224 aaPredicted RBP5.4□□□□□ -1.54
USF1-204ENST00000472217 IGLV5-37A0A075B6J1 123 aa5.39□□□□□ -1.55
USF1-204ENST00000472217 GAGE10A6NGK3 116 aa5.39□□□□□ -1.55
USF1-204ENST00000472217 RPL37AP8A6NKH3 93 aa5.39□□□□□ -1.55
USF1-204ENST00000472217 BCE1O60756 84 aa5.39□□□□□ -1.55
USF1-204ENST00000472217 ATP5LO75964 103 aa5.39□□□□□ -1.55
USF1-204ENST00000472217 SNAPINO95295 136 aa5.39□□□□□ -1.55
USF1-204ENST00000472217 LINC00167Q96N53 147 aa5.39□□□□□ -1.55
USF1-204ENST00000472217 PFN2P35080 140 aa5.38□□□□□ -1.55
USF1-204ENST00000472217 RPL13AP40429 203 aaKnown RBP5.38□□□□□ -1.55
USF1-204ENST00000472217 RPL28P46779 137 aaKnown RBP5.38□□□□□ -1.55
USF1-204ENST00000472217 NDUFA5Q16718 116 aa5.38□□□□□ -1.55
USF1-204ENST00000472217 SVBPQ8N300 66 aa5.38□□□□□ -1.55
USF1-204ENST00000472217 C11orf86A6NJI1 115 aa5.37□□□□□ -1.55
USF1-204ENST00000472217 SCO1O75880 301 aa5.37□□□□□ -1.55
USF1-204ENST00000472217 BAGE3Q86Y29 109 aa5.37□□□□□ -1.55
USF1-204ENST00000472217 NKAPP1Q8N9T2 125 aa5.37□□□□□ -1.55
USF1-204ENST00000472217 YPEL4Q96NS1 127 aa5.37□□□□□ -1.55
USF1-204ENST00000472217 LRP2P98164 4655 aa5.36□□□□□ -1.55
USF1-204ENST00000472217 TMEM170BQ5T4T1 132 aa5.36□□□□□ -1.55
USF1-204ENST00000472217 ZNF625Q96I27 306 aaPredicted RBP5.36□□□□□ -1.55
USF1-204ENST00000472217 SND1-IT1Q9HBX3 110 aa5.36□□□□□ -1.55
USF1-204ENST00000472217 ERG28Q9UKR5 140 aa5.36□□□□□ -1.55
USF1-204ENST00000472217 IGKV2-28A0A075B6P5 120 aa5.35□□□□□ -1.55
USF1-204ENST00000472217 IGKV2D-28P01615 120 aa5.35□□□□□ -1.55
USF1-204ENST00000472217 VPREB1P12018 145 aa5.35□□□□□ -1.55
USF1-204ENST00000472217 KRTAP13-1Q8IUC0 172 aa5.35□□□□□ -1.55
USF1-204ENST00000472217 RNF213Q63HN8 5207 aa5.34□□□□□ -1.55
USF1-204ENST00000472217 A0A087X002 238 aa5.34□□□□□ -1.55
USF1-204ENST00000472217 COX17Q14061 63 aa5.34□□□□□ -1.55
USF1-204ENST00000472217 Q8NDZ9 215 aa5.34□□□□□ -1.55
USF1-204ENST00000472217 CHCHD1Q96BP2 118 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 205.4 ms