RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 KANTRA0A1W2PQU2 76 aa3.93□□□□□ -1.78
HDAC1-204ENST00000471488 A8MWL6 223 aa3.93□□□□□ -1.78
HDAC1-204ENST00000471488 K7EN84 100 aa3.93□□□□□ -1.78
HDAC1-204ENST00000471488 APOC3P02656 99 aa3.93□□□□□ -1.78
HDAC1-204ENST00000471488 SUMO2P61956 95 aaKnown RBP3.93□□□□□ -1.78
HDAC1-204ENST00000471488 FABP9Q0Z7S8 132 aa3.93□□□□□ -1.78
HDAC1-204ENST00000471488 ASB16-AS1Q495Z4 193 aa3.93□□□□□ -1.78
HDAC1-204ENST00000471488 C6orf226Q5I0X4 101 aa3.93□□□□□ -1.78
HDAC1-204ENST00000471488 PYY3Q5JQD4 70 aa3.93□□□□□ -1.78
HDAC1-204ENST00000471488 C10orf91Q5T1B1 145 aa3.93□□□□□ -1.78
HDAC1-204ENST00000471488 UQCC3Q6UW78 93 aa3.93□□□□□ -1.78
HDAC1-204ENST00000471488 OCC1Q8TAD7 63 aa3.93□□□□□ -1.78
HDAC1-204ENST00000471488 IGKV2-28A0A075B6P5 120 aa3.92□□□□□ -1.78
HDAC1-204ENST00000471488 A0A1B0GUT8 65 aa3.92□□□□□ -1.78
HDAC1-204ENST00000471488 M0R2T5 61 aa3.92□□□□□ -1.78
HDAC1-204ENST00000471488 IGKV2D-28P01615 120 aa3.92□□□□□ -1.78
HDAC1-204ENST00000471488 RPL32P62910 135 aaKnown RBP3.92□□□□□ -1.78
HDAC1-204ENST00000471488 PRLHP81277 87 aa3.92□□□□□ -1.78
HDAC1-204ENST00000471488 SVBPQ8N300 66 aa3.92□□□□□ -1.78
HDAC1-204ENST00000471488 C3orf22Q8N5N4 141 aa3.92□□□□□ -1.78
HDAC1-204ENST00000471488 LINC00167Q96N53 147 aa3.92□□□□□ -1.78
HDAC1-204ENST00000471488 TMEM191AQ9H0A3 160 aa3.92□□□□□ -1.78
HDAC1-204ENST00000471488 TMEM218A2RU14 115 aa3.91□□□□□ -1.78
HDAC1-204ENST00000471488 COLCA2A8K830 154 aa3.91□□□□□ -1.78
HDAC1-204ENST00000471488 KRTAP9-7A8MTY7 169 aa3.91□□□□□ -1.78
HDAC1-204ENST00000471488 HIGD1CA8MV81 97 aa3.91□□□□□ -1.78
HDAC1-204ENST00000471488 M0R143 59 aa3.91□□□□□ -1.78
HDAC1-204ENST00000471488 PPP1R17O96001 155 aa3.91□□□□□ -1.78
HDAC1-204ENST00000471488 SCGB1A1P11684 91 aa3.91□□□□□ -1.78
HDAC1-204ENST00000471488 KIAA0087Q14695 138 aa3.91□□□□□ -1.78
HDAC1-204ENST00000471488 FAM229BQ4G0N7 80 aa3.91□□□□□ -1.78
HDAC1-204ENST00000471488 FAM19A1Q7Z5A9 133 aa3.91□□□□□ -1.78
HDAC1-204ENST00000471488 NKAPP1Q8N9T2 125 aa3.91□□□□□ -1.78
HDAC1-204ENST00000471488 TIMM21Q9BVV7 248 aa3.91□□□□□ -1.78
HDAC1-204ENST00000471488 SPANXA1Q9NS26 97 aa3.91□□□□□ -1.78
HDAC1-204ENST00000471488 PPP1R2P9O14990 202 aa3.9□□□□□ -1.79
HDAC1-204ENST00000471488 IFI27P40305 119 aaPredicted RBP3.9□□□□□ -1.79
HDAC1-204ENST00000471488 PNRC1Q12796 327 aaPredicted RBP3.9□□□□□ -1.79
HDAC1-204ENST00000471488 NRACQ8N912 160 aa3.9□□□□□ -1.79
HDAC1-204ENST00000471488 ALKBH7Q9BT30 221 aaPredicted RBP3.9□□□□□ -1.79
HDAC1-204ENST00000471488 SNHG12Q9BXW3 62 aa3.9□□□□□ -1.79
HDAC1-204ENST00000471488 CFC1BP0CG36 223 aa3.89□□□□□ -1.79
HDAC1-204ENST00000471488 S100A2P29034 98 aa3.89□□□□□ -1.79
HDAC1-204ENST00000471488 CKS2P33552 79 aa3.89□□□□□ -1.79
HDAC1-204ENST00000471488 RIGQ13278 110 aa3.89□□□□□ -1.79
HDAC1-204ENST00000471488 PEA15Q15121 130 aa3.89□□□□□ -1.79
HDAC1-204ENST00000471488 KRTAP13-3Q3SY46 172 aa3.89□□□□□ -1.79
HDAC1-204ENST00000471488 ZC2HC1BQ5TFG8 222 aa3.89□□□□□ -1.79
HDAC1-204ENST00000471488 FP248Q71RG6 208 aaPredicted RBP3.89□□□□□ -1.79
HDAC1-204ENST00000471488 DAND5Q8N907 189 aa3.89□□□□□ -1.79
HDAC1-204ENST00000471488 A0A1B0GV72 72 aa3.88□□□□□ -1.79
HDAC1-204ENST00000471488 A4D1N5 150 aa3.88□□□□□ -1.79
HDAC1-204ENST00000471488 MT-ND4LP03901 98 aa3.88□□□□□ -1.79
HDAC1-204ENST00000471488 RAB5AP20339 215 aa3.88□□□□□ -1.79
HDAC1-204ENST00000471488 MRPL51Q4U2R6 128 aaKnown RBP3.88□□□□□ -1.79
HDAC1-204ENST00000471488 Q6ZN92 141 aa3.88□□□□□ -1.79
HDAC1-204ENST00000471488 TEX43Q6ZNM6 134 aa3.88□□□□□ -1.79
HDAC1-204ENST00000471488 CBLN2Q8IUK8 224 aa3.88□□□□□ -1.79
HDAC1-204ENST00000471488 HIGD2AQ9BW72 106 aa3.88□□□□□ -1.79
HDAC1-204ENST00000471488 TP73-AS1Q9UF72 201 aa3.88□□□□□ -1.79
HDAC1-204ENST00000471488 NDUFA12Q9UI09 145 aa3.88□□□□□ -1.79
HDAC1-204ENST00000471488 MT1HP80294 61 aa3.87□□□□□ -1.79
HDAC1-204ENST00000471488 MRPS36P82909 103 aaKnown RBP3.87□□□□□ -1.79
HDAC1-204ENST00000471488 SPAG11AQ6PDA7 123 aa3.87□□□□□ -1.79
HDAC1-204ENST00000471488 Q8NBF4 154 aa3.87□□□□□ -1.79
HDAC1-204ENST00000471488 FAM104AQ969W3 186 aa3.87□□□□□ -1.79
HDAC1-204ENST00000471488 SMIM2Q9BVW6 85 aa3.87□□□□□ -1.79
HDAC1-204ENST00000471488 SMCO4Q9NRQ5 59 aa3.87□□□□□ -1.79
HDAC1-204ENST00000471488 IGLV4-3A0A075B6K6 122 aa3.86□□□□□ -1.79
HDAC1-204ENST00000471488 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.86□□□□□ -1.79
HDAC1-204ENST00000471488 F8VRH5 84 aa3.86□□□□□ -1.79
HDAC1-204ENST00000471488 TNFRSF6BO95407 300 aa3.86□□□□□ -1.79
HDAC1-204ENST00000471488 ZNF345Q14585 488 aa3.86□□□□□ -1.79
HDAC1-204ENST00000471488 FAM231DQ6ZW35 169 aa3.86□□□□□ -1.79
HDAC1-204ENST00000471488 LINC01551Q86U37 167 aa3.86□□□□□ -1.79
HDAC1-204ENST00000471488 Q8IZM0 81 aa3.86□□□□□ -1.79
HDAC1-204ENST00000471488 TMEM141Q96I45 108 aa3.86□□□□□ -1.79
HDAC1-204ENST00000471488 C20orf78Q9BR46 151 aa3.86□□□□□ -1.79
HDAC1-204ENST00000471488 SEC11CQ9BY50 192 aa3.86□□□□□ -1.79
HDAC1-204ENST00000471488 IGLV8-61A0A075B6I0 122 aa3.85□□□□□ -1.79
HDAC1-204ENST00000471488 LOC389332A0A1B0GUA5 103 aa3.85□□□□□ -1.79
HDAC1-204ENST00000471488 D6R8Y8 96 aa3.85□□□□□ -1.79
HDAC1-204ENST00000471488 ADCYAP1P18509 176 aa3.85□□□□□ -1.79
HDAC1-204ENST00000471488 JOSD1Q15040 202 aaPredicted RBP3.85□□□□□ -1.79
HDAC1-204ENST00000471488 CT83Q5H943 113 aa3.85□□□□□ -1.79
HDAC1-204ENST00000471488 LCE2CQ5TA81 110 aa3.85□□□□□ -1.79
HDAC1-204ENST00000471488 FAM104BQ5XKR9 115 aa3.85□□□□□ -1.79
HDAC1-204ENST00000471488 KRTAP13-1Q8IUC0 172 aa3.85□□□□□ -1.79
HDAC1-204ENST00000471488 VPS25Q9BRG1 176 aa3.85□□□□□ -1.79
HDAC1-204ENST00000471488 VCX2Q9H322 139 aa3.85□□□□□ -1.79
HDAC1-204ENST00000471488 PRO1933Q9H354 126 aa3.85□□□□□ -1.79
HDAC1-204ENST00000471488 C20orf202A1L168 122 aa3.84□□□□□ -1.79
HDAC1-204ENST00000471488 HMSDA8MTL9 139 aa3.84□□□□□ -1.79
HDAC1-204ENST00000471488 NPYP01303 97 aa3.84□□□□□ -1.79
HDAC1-204ENST00000471488 KRTAP10-6P60371 365 aaPredicted RBP3.84□□□□□ -1.79
HDAC1-204ENST00000471488 UBE2V1Q13404 147 aa3.84□□□□□ -1.79
HDAC1-204ENST00000471488 COX6B2Q6YFQ2 88 aa3.84□□□□□ -1.79
HDAC1-204ENST00000471488 PLEKHB2Q96CS7 222 aa3.84□□□□□ -1.79
HDAC1-204ENST00000471488 SMIM7Q9BQ49 75 aa3.84□□□□□ -1.79
HDAC1-204ENST00000471488 EIF5A2Q9GZV4 153 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms