RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 LCE2DQ5TA82 110 aaPredicted RBP7.89□□□□□ -1.15
HDAC6-217ENST00000469223 ATOH7Q8N100 152 aa7.89□□□□□ -1.15
HDAC6-217ENST00000469223 ZNF664Q8N3J9 261 aa7.89□□□□□ -1.15
HDAC6-217ENST00000469223 DPH3Q96FX2 82 aa7.89□□□□□ -1.15
HDAC6-217ENST00000469223 C1orf43Q9BWL3 253 aa7.89□□□□□ -1.15
HDAC6-217ENST00000469223 A0A1B0GUV1 79 aa7.88□□□□□ -1.15
HDAC6-217ENST00000469223 SPACA4Q8TDM5 124 aa7.88□□□□□ -1.15
HDAC6-217ENST00000469223 AMELXQ99217 191 aa7.88□□□□□ -1.15
HDAC6-217ENST00000469223 PMCHL2Q9BQD1 86 aa7.88□□□□□ -1.15
HDAC6-217ENST00000469223 GEMIN7Q9H840 131 aaKnown RBP7.88□□□□□ -1.15
HDAC6-217ENST00000469223 H3BRM9 83 aa7.87□□□□□ -1.15
HDAC6-217ENST00000469223 CCL25O15444 150 aa7.87□□□□□ -1.15
HDAC6-217ENST00000469223 HERVK_113P63121 156 aa7.87□□□□□ -1.15
HDAC6-217ENST00000469223 GAGE6Q13070 117 aa7.87□□□□□ -1.15
HDAC6-217ENST00000469223 ZC2HC1BQ5TFG8 222 aa7.86□□□□□ -1.15
HDAC6-217ENST00000469223 SPINK6Q6UWN8 80 aa7.86□□□□□ -1.15
HDAC6-217ENST00000469223 Q6ZUT4 128 aa7.86□□□□□ -1.15
HDAC6-217ENST00000469223 CDC42SE2Q9NRR3 84 aa7.86□□□□□ -1.15
HDAC6-217ENST00000469223 PLAC8Q9NZF1 115 aa7.86□□□□□ -1.15
HDAC6-217ENST00000469223 TINCRA0A1B0GVN0 87 aa7.85□□□□□ -1.15
HDAC6-217ENST00000469223 C11orf86A6NJI1 115 aa7.85□□□□□ -1.15
HDAC6-217ENST00000469223 IGLC3P0DOY3 106 aa7.85□□□□□ -1.15
HDAC6-217ENST00000469223 TMEM170BQ5T4T1 132 aa7.85□□□□□ -1.15
HDAC6-217ENST00000469223 UQCR10Q9UDW1 63 aa7.85□□□□□ -1.15
HDAC6-217ENST00000469223 hDV102S1A0JD36 115 aa7.84□□□□□ -1.15
HDAC6-217ENST00000469223 SS18Q15532 418 aa7.84□□□□□ -1.15
HDAC6-217ENST00000469223 OPRPNQ99935 248 aaPredicted RBP7.84□□□□□ -1.15
HDAC6-217ENST00000469223 MUC17Q685J3 4493 aa7.84□□□□□ -1.15
HDAC6-217ENST00000469223 CRPP02741 224 aa7.83□□□□□ -1.16
HDAC6-217ENST00000469223 UBE2D1P51668 147 aa7.83□□□□□ -1.16
HDAC6-217ENST00000469223 PRR4Q16378 134 aa7.83□□□□□ -1.16
HDAC6-217ENST00000469223 SLC25A34Q6PIV7 304 aa7.83□□□□□ -1.16
HDAC6-217ENST00000469223 IGLV4-69A0A075B6H9 119 aa7.82□□□□□ -1.16
HDAC6-217ENST00000469223 IGHV3-64A0A075B6Q5 118 aa7.82□□□□□ -1.16
HDAC6-217ENST00000469223 TRAV13-1A0A0B4J241 112 aa7.82□□□□□ -1.16
HDAC6-217ENST00000469223 PCP4L1A6NKN8 68 aa7.82□□□□□ -1.16
HDAC6-217ENST00000469223 ANGP03950 147 aaKnown RBP7.82□□□□□ -1.16
HDAC6-217ENST00000469223 NMUP48645 174 aa7.82□□□□□ -1.16
HDAC6-217ENST00000469223 RBX1P62877 108 aa7.82□□□□□ -1.16
HDAC6-217ENST00000469223 ENHOQ6UWT2 76 aa7.82□□□□□ -1.16
HDAC6-217ENST00000469223 FAM19A3Q7Z5A8 133 aa7.82□□□□□ -1.16
HDAC6-217ENST00000469223 LINC00469Q8N7U9 141 aa7.82□□□□□ -1.16
HDAC6-217ENST00000469223 MIEN1Q9BRT3 115 aa7.82□□□□□ -1.16
HDAC6-217ENST00000469223 E9PLD3 99 aa7.81□□□□□ -1.16
HDAC6-217ENST00000469223 MPV17L2Q567V2 206 aa7.81□□□□□ -1.16
HDAC6-217ENST00000469223 RNASE13Q5GAN3 156 aaKnown RBP7.81□□□□□ -1.16
HDAC6-217ENST00000469223 STPG4Q8N801 248 aa7.81□□□□□ -1.16
HDAC6-217ENST00000469223 PLEKHB2Q96CS7 222 aa7.81□□□□□ -1.16
HDAC6-217ENST00000469223 PRO1933Q9H354 126 aa7.81□□□□□ -1.16
HDAC6-217ENST00000469223 COX8AP10176 69 aa7.8□□□□□ -1.16
HDAC6-217ENST00000469223 LGALS3P17931 250 aaKnown RBP7.8□□□□□ -1.16
HDAC6-217ENST00000469223 DDTP30046 118 aa7.8□□□□□ -1.16
HDAC6-217ENST00000469223 CNBPP62633 177 aaKnown RBP7.8□□□□□ -1.16
HDAC6-217ENST00000469223 MIAQ16674 131 aa7.8□□□□□ -1.16
HDAC6-217ENST00000469223 DLEU1O43261 78 aa7.79□□□□□ -1.16
HDAC6-217ENST00000469223 REG3AQ06141 175 aa7.79□□□□□ -1.16
HDAC6-217ENST00000469223 MAJINQ3KP22 176 aa7.79□□□□□ -1.16
HDAC6-217ENST00000469223 IGLV4-60A0A075B6I1 120 aa7.78□□□□□ -1.16
HDAC6-217ENST00000469223 IGLV5-45A0A087WSX0 123 aa7.78□□□□□ -1.16
HDAC6-217ENST00000469223 TRAV8-4A0A0B4J246 113 aa7.78□□□□□ -1.16
HDAC6-217ENST00000469223 IGKV3OR2-268A0A0C4DH90 116 aa7.78□□□□□ -1.16
HDAC6-217ENST00000469223 TMEM223A0PJW6 202 aa7.78□□□□□ -1.16
HDAC6-217ENST00000469223 ZNF22P17026 224 aaPredicted RBP7.78□□□□□ -1.16
HDAC6-217ENST00000469223 SRSF9Q13242 221 aaKnown RBP eCLIP7.78□□□□□ -1.16
HDAC6-217ENST00000469223 LINC00242Q5T6M2 205 aa7.78□□□□□ -1.16
HDAC6-217ENST00000469223 C14orf144Q96I85 54 aa7.78□□□□□ -1.16
HDAC6-217ENST00000469223 LINC00959A0A1B0GUT2 108 aa7.77□□□□□ -1.17
HDAC6-217ENST00000469223 LEPROTO15243 131 aa7.77□□□□□ -1.17
HDAC6-217ENST00000469223 ANKRD39Q53RE8 183 aa7.77□□□□□ -1.17
HDAC6-217ENST00000469223 SFTA2Q6UW10 78 aa7.77□□□□□ -1.17
HDAC6-217ENST00000469223 LINC00269Q8N2A0 174 aa7.77□□□□□ -1.17
HDAC6-217ENST00000469223 FAM104AQ969W3 186 aa7.77□□□□□ -1.17
HDAC6-217ENST00000469223 PRR34Q9NV39 138 aa7.77□□□□□ -1.17
HDAC6-217ENST00000469223 IGHV1-58A0A0C4DH39 117 aa7.76□□□□□ -1.17
HDAC6-217ENST00000469223 BOD1L2Q8IYS8 172 aa7.76□□□□□ -1.17
HDAC6-217ENST00000469223 LINC01561Q8N1V8 128 aa7.76□□□□□ -1.17
HDAC6-217ENST00000469223 IGKV2-24A0A0C4DH68 120 aa7.75□□□□□ -1.17
HDAC6-217ENST00000469223 MYMXA0A1B0GTQ4 84 aa7.75□□□□□ -1.17
HDAC6-217ENST00000469223 J3QQQ9 107 aa7.75□□□□□ -1.17
HDAC6-217ENST00000469223 APOMO95445 188 aa7.75□□□□□ -1.17
HDAC6-217ENST00000469223 CLPSL2Q6UWE3 100 aa7.75□□□□□ -1.17
HDAC6-217ENST00000469223 SCGB1D4Q6XE38 83 aa7.75□□□□□ -1.17
HDAC6-217ENST00000469223 CDKN2A-AS1Q9UH64 79 aa7.75□□□□□ -1.17
HDAC6-217ENST00000469223 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.74□□□□□ -1.17
HDAC6-217ENST00000469223 ZNF815PA8K554 130 aa7.74□□□□□ -1.17
HDAC6-217ENST00000469223 SLPIP03973 132 aa7.74□□□□□ -1.17
HDAC6-217ENST00000469223 MALP21145 153 aa7.74□□□□□ -1.17
HDAC6-217ENST00000469223 KRTAP26-1Q6PEX3 210 aa7.74□□□□□ -1.17
HDAC6-217ENST00000469223 CD164L2Q6UWJ8 174 aa7.74□□□□□ -1.17
HDAC6-217ENST00000469223 PSORS1C2Q9UIG4 136 aa7.74□□□□□ -1.17
HDAC6-217ENST00000469223 M0R143 59 aa7.73□□□□□ -1.17
HDAC6-217ENST00000469223 PRSS2P07478 247 aa7.73□□□□□ -1.17
HDAC6-217ENST00000469223 XCL1P47992 114 aa7.73□□□□□ -1.17
HDAC6-217ENST00000469223 PRR26Q8N8Z3 221 aa7.73□□□□□ -1.17
HDAC6-217ENST00000469223 HIGD1BQ9P298 99 aa7.73□□□□□ -1.17
HDAC6-217ENST00000469223 A0A087WZ39 114 aa7.72□□□□□ -1.17
HDAC6-217ENST00000469223 LINC00587B1AMM8 73 aa7.72□□□□□ -1.17
HDAC6-217ENST00000469223 COX7A2LO14548 114 aa7.72□□□□□ -1.17
HDAC6-217ENST00000469223 SPINK8P0C7L1 97 aa7.72□□□□□ -1.17
HDAC6-217ENST00000469223 COX6A2Q02221 97 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms