RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 NUPR1O60356 82 aa7.2□□□□□ -1.26
HDAC3-204ENST00000469207 MRPL55Q7Z7F7 128 aaKnown RBP7.2□□□□□ -1.26
HDAC3-204ENST00000469207 Q8IZM0 81 aa7.2□□□□□ -1.26
HDAC3-204ENST00000469207 GAGE10A6NGK3 116 aa7.19□□□□□ -1.26
HDAC3-204ENST00000469207 LBHQ53QV2 105 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-204ENST00000469207 ATP5L2Q7Z4Y8 100 aa7.19□□□□□ -1.26
HDAC3-204ENST00000469207 FAM19A3Q7Z5A8 133 aa7.19□□□□□ -1.26
HDAC3-204ENST00000469207 TYMSOSQ8TAI1 123 aa7.19□□□□□ -1.26
HDAC3-204ENST00000469207 LINC00167Q96N53 147 aa7.19□□□□□ -1.26
HDAC3-204ENST00000469207 RETNLBQ9BQ08 111 aa7.19□□□□□ -1.26
HDAC3-204ENST00000469207 F8VRH5 84 aa7.17□□□□□ -1.26
HDAC3-204ENST00000469207 BCE1O60756 84 aa7.17□□□□□ -1.26
HDAC3-204ENST00000469207 KRTAP13-2Q52LG2 175 aa7.17□□□□□ -1.26
HDAC3-204ENST00000469207 LAMTOR2Q9Y2Q5 125 aa7.17□□□□□ -1.26
HDAC3-204ENST00000469207 SCO1O75880 301 aa7.16□□□□□ -1.26
HDAC3-204ENST00000469207 CRYGAP11844 174 aa7.16□□□□□ -1.26
HDAC3-204ENST00000469207 RPL28P46779 137 aaKnown RBP7.16□□□□□ -1.26
HDAC3-204ENST00000469207 RAB5BP61020 215 aa7.16□□□□□ -1.26
HDAC3-204ENST00000469207 HERVK_113P63121 156 aa7.16□□□□□ -1.26
HDAC3-204ENST00000469207 ORMDL2Q53FV1 153 aa7.16□□□□□ -1.26
HDAC3-204ENST00000469207 LCE2AQ5TA79 106 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-204ENST00000469207 GEMIN7Q9H840 131 aaKnown RBP7.16□□□□□ -1.26
HDAC3-204ENST00000469207 ADCYAP1P18509 176 aa7.15□□□□□ -1.26
HDAC3-204ENST00000469207 KIAA1644Q3SXP7 199 aa7.15□□□□□ -1.26
HDAC3-204ENST00000469207 TP73-AS1Q9UF72 201 aa7.15□□□□□ -1.26
HDAC3-204ENST00000469207 SMIM1B2RUZ4 78 aa7.14□□□□□ -1.27
HDAC3-204ENST00000469207 A0A0U1RQV1 116 aa7.13□□□□□ -1.27
HDAC3-204ENST00000469207 KRTAP13-1Q8IUC0 172 aa7.13□□□□□ -1.27
HDAC3-204ENST00000469207 TOMM6Q96B49 74 aa7.13□□□□□ -1.27
HDAC3-204ENST00000469207 NPSP0C0P6 89 aa7.12□□□□□ -1.27
HDAC3-204ENST00000469207 SPINK8P0C7L1 97 aa7.12□□□□□ -1.27
HDAC3-204ENST00000469207 SEC11AP67812 179 aa7.12□□□□□ -1.27
HDAC3-204ENST00000469207 COX7B2Q8TF08 81 aa7.12□□□□□ -1.27
HDAC3-204ENST00000469207 ANAPC16Q96DE5 110 aa7.12□□□□□ -1.27
HDAC3-204ENST00000469207 TIMM17AQ99595 171 aa7.12□□□□□ -1.27
HDAC3-204ENST00000469207 IGKV2-28A0A075B6P5 120 aa7.11□□□□□ -1.27
HDAC3-204ENST00000469207 IGKV2D-28P01615 120 aa7.11□□□□□ -1.27
HDAC3-204ENST00000469207 UBE2AP49459 152 aa7.11□□□□□ -1.27
HDAC3-204ENST00000469207 PNRC1Q12796 327 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-204ENST00000469207 SCGB3A1Q96QR1 104 aa7.11□□□□□ -1.27
HDAC3-204ENST00000469207 NXT2Q9NPJ8 142 aaKnown RBP7.11□□□□□ -1.27
HDAC3-204ENST00000469207 K7EMI3 77 aa7.1□□□□□ -1.27
HDAC3-204ENST00000469207 MT-ND4LP03901 98 aa7.1□□□□□ -1.27
HDAC3-204ENST00000469207 CXCL5P42830 114 aa7.1□□□□□ -1.27
HDAC3-204ENST00000469207 PDZD11Q5EBL8 140 aa7.1□□□□□ -1.27
HDAC3-204ENST00000469207 PAPPA-AS1Q5QFB9 102 aa7.1□□□□□ -1.27
HDAC3-204ENST00000469207 ERASQ7Z444 233 aa7.1□□□□□ -1.27
HDAC3-204ENST00000469207 IGLV5-37A0A075B6J1 123 aa7.09□□□□□ -1.27
HDAC3-204ENST00000469207 TINCRA0A1B0GVN0 87 aa7.09□□□□□ -1.27
HDAC3-204ENST00000469207 PRLHP81277 87 aa7.09□□□□□ -1.27
HDAC3-204ENST00000469207 LINC00304Q8N9R0 145 aa7.09□□□□□ -1.27
HDAC3-204ENST00000469207 IGLV5-45A0A087WSX0 123 aa7.08□□□□□ -1.28
HDAC3-204ENST00000469207 PFN2P35080 140 aa7.08□□□□□ -1.28
HDAC3-204ENST00000469207 NKAPP1Q8N9T2 125 aa7.08□□□□□ -1.28
HDAC3-204ENST00000469207 CDIP1Q9H305 208 aa7.08□□□□□ -1.28
HDAC3-204ENST00000469207 CST9LQ9H4G1 147 aa7.08□□□□□ -1.28
HDAC3-204ENST00000469207 TMEM238C9JI98 176 aa7.07□□□□□ -1.28
HDAC3-204ENST00000469207 IGLV7-46A0A075B6I9 117 aa7.06□□□□□ -1.28
HDAC3-204ENST00000469207 G0S2P27469 103 aa7.06□□□□□ -1.28
HDAC3-204ENST00000469207 FAM229BQ4G0N7 80 aa7.06□□□□□ -1.28
HDAC3-204ENST00000469207 FAM19A1Q7Z5A9 133 aa7.06□□□□□ -1.28
HDAC3-204ENST00000469207 C3orf22Q8N5N4 141 aa7.06□□□□□ -1.28
HDAC3-204ENST00000469207 Q8NDZ9 215 aa7.06□□□□□ -1.28
HDAC3-204ENST00000469207 IGKV2D-26A0A0A0MRZ7 120 aa7.05□□□□□ -1.28
HDAC3-204ENST00000469207 VPREB1P12018 145 aa7.04□□□□□ -1.28
HDAC3-204ENST00000469207 PMVKQ15126 192 aa7.04□□□□□ -1.28
HDAC3-204ENST00000469207 ZNF625Q96I27 306 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-204ENST00000469207 TMEM126AQ9H061 195 aa7.04□□□□□ -1.28
HDAC3-204ENST00000469207 KRTAP9-6A0A140TA67 174 aa7.03□□□□□ -1.28
HDAC3-204ENST00000469207 ATP5LO75964 103 aa7.03□□□□□ -1.28
HDAC3-204ENST00000469207 TPRXLQ17RH7 258 aa7.03□□□□□ -1.28
HDAC3-204ENST00000469207 PLEKHB2Q96CS7 222 aa7.03□□□□□ -1.28
HDAC3-204ENST00000469207 SND1-IT1Q9HBX3 110 aa7.03□□□□□ -1.28
HDAC3-204ENST00000469207 LINC01546A6NGU7 62 aa7.02□□□□□ -1.29
HDAC3-204ENST00000469207 M0R378 163 aa7.02□□□□□ -1.29
HDAC3-204ENST00000469207 RAB14P61106 215 aa7.02□□□□□ -1.29
HDAC3-204ENST00000469207 PPDPFQ9H3Y8 114 aa7.02□□□□□ -1.29
HDAC3-204ENST00000469207 NDUFA6P56556 154 aa7.01□□□□□ -1.29
HDAC3-204ENST00000469207 CBLN2Q8IUK8 224 aa7.01□□□□□ -1.29
HDAC3-204ENST00000469207 MRPL18Q9H0U6 180 aaKnown RBP7.01□□□□□ -1.29
HDAC3-204ENST00000469207 IGLV5-39A0A0G2JS06 123 aa7□□□□□ -1.29
HDAC3-204ENST00000469207 H3BRM9 83 aa7□□□□□ -1.29
HDAC3-204ENST00000469207 ERG28Q9UKR5 140 aa7□□□□□ -1.29
HDAC3-204ENST00000469207 IGLC3P0DOY3 106 aa6.99□□□□□ -1.29
HDAC3-204ENST00000469207 ZNF22P17026 224 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-204ENST00000469207 HIGD2AQ9BW72 106 aa6.99□□□□□ -1.29
HDAC3-204ENST00000469207 A0A096LNJ9 63 aa6.98□□□□□ -1.29
HDAC3-204ENST00000469207 FA2HQ7L5A8 372 aa6.98□□□□□ -1.29
HDAC3-204ENST00000469207 GNB1LQ9BYB4 327 aa6.98□□□□□ -1.29
HDAC3-204ENST00000469207 A0A0U1RRA0 63 aa6.97□□□□□ -1.29
HDAC3-204ENST00000469207 RPL24P83731 157 aaKnown RBP6.97□□□□□ -1.29
HDAC3-204ENST00000469207 FABP9Q0Z7S8 132 aa6.97□□□□□ -1.29
HDAC3-204ENST00000469207 PMCHL1Q16048 86 aa6.97□□□□□ -1.29
HDAC3-204ENST00000469207 DAND5Q8N907 189 aa6.97□□□□□ -1.29
HDAC3-204ENST00000469207 URB1-AS1Q96HZ7 61 aa6.97□□□□□ -1.29
HDAC3-204ENST00000469207 SMCO4Q9NRQ5 59 aa6.97□□□□□ -1.29
HDAC3-204ENST00000469207 SPRR4Q96PI1 79 aa6.96□□□□□ -1.3
HDAC3-204ENST00000469207 KRTAP4-1Q9BYQ7 146 aa6.96□□□□□ -1.3
HDAC3-204ENST00000469207 TRAV9-1A0A075B6T8 112 aa6.95□□□□□ -1.3
HDAC3-204ENST00000469207 TMEM218A2RU14 115 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms