RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 DAZ3Q9NR90 486 aaKnown RBP4.75□□□□□ -1.65
SCAF4-204ENST00000467731 IGLV2-18A0A075B6J9 118 aa4.74□□□□□ -1.65
SCAF4-204ENST00000467731 LINC01620Q4KN68 170 aa4.74□□□□□ -1.65
SCAF4-204ENST00000467731 IGKV2D-26A0A0A0MRZ7 120 aa4.74□□□□□ -1.65
SCAF4-204ENST00000467731 A0A0U1RQV1 116 aa4.74□□□□□ -1.65
SCAF4-204ENST00000467731 I3L3M4 83 aa4.74□□□□□ -1.65
SCAF4-204ENST00000467731 VCYO14598 125 aa4.74□□□□□ -1.65
SCAF4-204ENST00000467731 FCER1GP30273 86 aa4.74□□□□□ -1.65
SCAF4-204ENST00000467731 LINC01549A6NIU2 74 aa4.74□□□□□ -1.65
SCAF4-204ENST00000467731 PMAIP1Q13794 54 aa4.74□□□□□ -1.65
SCAF4-204ENST00000467731 PRSS3P2Q8NHM4 247 aa4.74□□□□□ -1.65
SCAF4-204ENST00000467731 NTN5Q8WTR8 489 aaPredicted RBP4.74□□□□□ -1.65
SCAF4-204ENST00000467731 NXT2Q9NPJ8 142 aaKnown RBP4.74□□□□□ -1.65
SCAF4-204ENST00000467731 DNAH1Q9P2D7 4330 aa4.73□□□□□ -1.65
SCAF4-204ENST00000467731 TSHBP01222 138 aa4.73□□□□□ -1.65
SCAF4-204ENST00000467731 NTM-AS1Q6ZSK4 140 aa4.73□□□□□ -1.65
SCAF4-204ENST00000467731 LINC01561Q8N1V8 128 aa4.73□□□□□ -1.65
SCAF4-204ENST00000467731 Q8N8P6 123 aa4.73□□□□□ -1.65
SCAF4-204ENST00000467731 APLNQ9ULZ1 77 aa4.73□□□□□ -1.65
SCAF4-204ENST00000467731 LYPD5Q6UWN5 251 aa4.73□□□□□ -1.65
SCAF4-204ENST00000467731 TRBV6-8A0A0A6YYG3 113 aa4.72□□□□□ -1.65
SCAF4-204ENST00000467731 ATOX1O00244 68 aa4.72□□□□□ -1.65
SCAF4-204ENST00000467731 ESRGQ1W209 222 aa4.72□□□□□ -1.65
SCAF4-204ENST00000467731 CASC10Q5T4H9 136 aa4.72□□□□□ -1.65
SCAF4-204ENST00000467731 IFI27L1Q96BM0 104 aa4.72□□□□□ -1.65
SCAF4-204ENST00000467731 TTTY13Q9BZ97 58 aa4.72□□□□□ -1.65
SCAF4-204ENST00000467731 EPM2AB3EWF7 344 aa4.71□□□□□ -1.65
SCAF4-204ENST00000467731 HERVK_113P61574 105 aa4.71□□□□□ -1.65
SCAF4-204ENST00000467731 LAGE3Q14657 143 aa4.71□□□□□ -1.65
SCAF4-204ENST00000467731 A0A096LNJ9 63 aa4.71□□□□□ -1.66
SCAF4-204ENST00000467731 LINC01546A6NGU7 62 aa4.71□□□□□ -1.66
SCAF4-204ENST00000467731 CXCL5P42830 114 aa4.71□□□□□ -1.66
SCAF4-204ENST00000467731 UBE2D1P51668 147 aa4.71□□□□□ -1.66
SCAF4-204ENST00000467731 CHCHD7Q9BUK0 85 aa4.71□□□□□ -1.66
SCAF4-204ENST00000467731 VPS13DQ5THJ4 4388 aa4.71□□□□□ -1.66
SCAF4-204ENST00000467731 NDUFC2-KCTD14E9PQ53 114 aa4.71□□□□□ -1.66
SCAF4-204ENST00000467731 C3orf84H3BNL1 204 aa4.71□□□□□ -1.66
SCAF4-204ENST00000467731 ORMDL2Q53FV1 153 aa4.71□□□□□ -1.66
SCAF4-204ENST00000467731 LELP1Q5T871 98 aa4.71□□□□□ -1.66
SCAF4-204ENST00000467731 BRK1Q8WUW1 75 aa4.71□□□□□ -1.66
SCAF4-204ENST00000467731 LINC00588Q9Y4M8 146 aa4.71□□□□□ -1.66
SCAF4-204ENST00000467731 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.7□□□□□ -1.66
SCAF4-204ENST00000467731 IGKV2-29A2NJV5 120 aaPredicted RBP4.7□□□□□ -1.66
SCAF4-204ENST00000467731 HBDP02042 147 aa4.7□□□□□ -1.66
SCAF4-204ENST00000467731 ACYP1P07311 99 aa4.7□□□□□ -1.66
SCAF4-204ENST00000467731 CCL18P55774 89 aa4.7□□□□□ -1.66
SCAF4-204ENST00000467731 TMEM170BQ5T4T1 132 aa4.7□□□□□ -1.66
SCAF4-204ENST00000467731 UBE2WQ96B02 151 aa4.7□□□□□ -1.66
SCAF4-204ENST00000467731 TEX49A0A1B0GTD5 131 aa4.7□□□□□ -1.66
SCAF4-204ENST00000467731 RPL39P62891 51 aaKnown RBP4.7□□□□□ -1.66
SCAF4-204ENST00000467731 SFTA2Q6UW10 78 aa4.7□□□□□ -1.66
SCAF4-204ENST00000467731 TMEM243Q9BU79 118 aa4.7□□□□□ -1.66
SCAF4-204ENST00000467731 CYSTM1Q9H1C7 97 aa4.7□□□□□ -1.66
SCAF4-204ENST00000467731 NPC2P61916 151 aa4.69□□□□□ -1.66
SCAF4-204ENST00000467731 WFDC10BQ8IUB3 73 aa4.69□□□□□ -1.66
SCAF4-204ENST00000467731 MAPKAPK5-AS1Q8N8E1 139 aa4.69□□□□□ -1.66
SCAF4-204ENST00000467731 C20orf203Q8NBC4 194 aa4.69□□□□□ -1.66
SCAF4-204ENST00000467731 UBE2L6O14933 153 aa4.69□□□□□ -1.66
SCAF4-204ENST00000467731 C2orf66Q6UXQ4 117 aa4.69□□□□□ -1.66
SCAF4-204ENST00000467731 C5orf38Q86SI9 138 aa4.69□□□□□ -1.66
SCAF4-204ENST00000467731 LINC00643Q86TS7 51 aa4.69□□□□□ -1.66
SCAF4-204ENST00000467731 SERP1Q9Y6X1 66 aa4.69□□□□□ -1.66
SCAF4-204ENST00000467731 SMIM26A0A096LP01 95 aa4.68□□□□□ -1.66
SCAF4-204ENST00000467731 H3BT86 120 aa4.68□□□□□ -1.66
SCAF4-204ENST00000467731 UBE2DNLQ8IWF7 75 aa4.68□□□□□ -1.66
SCAF4-204ENST00000467731 Q8N3U1 123 aa4.68□□□□□ -1.66
SCAF4-204ENST00000467731 UPK3BQ9BT76 320 aa4.68□□□□□ -1.66
SCAF4-204ENST00000467731 HIST1H4AP62805 103 aaKnown RBP4.68□□□□□ -1.66
SCAF4-204ENST00000467731 SERP2Q8N6R1 65 aa4.68□□□□□ -1.66
SCAF4-204ENST00000467731 TOMM6Q96B49 74 aa4.68□□□□□ -1.66
SCAF4-204ENST00000467731 UBE2D4Q9Y2X8 147 aa4.68□□□□□ -1.66
SCAF4-204ENST00000467731 ALMS1Q8TCU4 4167 aa4.67□□□□□ -1.66
SCAF4-204ENST00000467731 DNAH10Q8IVF4 4471 aa4.67□□□□□ -1.66
SCAF4-204ENST00000467731 TRBV10-2A0A0K0K1G8 114 aa4.67□□□□□ -1.66
SCAF4-204ENST00000467731 DGAT2L7PQ6IED9 249 aa4.67□□□□□ -1.66
SCAF4-204ENST00000467731 HYDINQ4G0P3 5121 aa4.67□□□□□ -1.66
SCAF4-204ENST00000467731 H7C423 109 aa4.67□□□□□ -1.66
SCAF4-204ENST00000467731 IGLV4-60A0A075B6I1 120 aa4.66□□□□□ -1.66
SCAF4-204ENST00000467731 ATXN8Q156A1 80 aa4.66□□□□□ -1.66
SCAF4-204ENST00000467731 Q9H8V8 135 aa4.66□□□□□ -1.66
SCAF4-204ENST00000467731 KMT2CQ8NEZ4 4911 aaKnown RBP4.66□□□□□ -1.66
SCAF4-204ENST00000467731 SACSQ9NZJ4 4579 aa4.66□□□□□ -1.66
SCAF4-204ENST00000467731 A0A1B0GUV1 79 aa4.66□□□□□ -1.66
SCAF4-204ENST00000467731 IGIPA6NJ69 53 aa4.66□□□□□ -1.66
SCAF4-204ENST00000467731 IGHV3-30P01768 117 aa4.66□□□□□ -1.66
SCAF4-204ENST00000467731 IGHV3-33P01772 117 aa4.66□□□□□ -1.66
SCAF4-204ENST00000467731 IGHV3-30-3P0DP02 117 aa4.66□□□□□ -1.66
SCAF4-204ENST00000467731 IGHV3-30-5P0DP03 117 aa4.66□□□□□ -1.66
SCAF4-204ENST00000467731 OPRPNQ99935 248 aaPredicted RBP4.66□□□□□ -1.66
SCAF4-204ENST00000467731 DNAH10OSP0CZ25 163 aa4.65□□□□□ -1.66
SCAF4-204ENST00000467731 RNASE13Q5GAN3 156 aaKnown RBP4.65□□□□□ -1.66
SCAF4-204ENST00000467731 LINC01556Q5JQF7 62 aa4.65□□□□□ -1.66
SCAF4-204ENST00000467731 FAM104AQ969W3 186 aa4.65□□□□□ -1.66
SCAF4-204ENST00000467731 SCGB3A1Q96QR1 104 aa4.65□□□□□ -1.66
SCAF4-204ENST00000467731 DNAH6Q9C0G6 4158 aa4.65□□□□□ -1.66
SCAF4-204ENST00000467731 PRSS1P07477 247 aa4.65□□□□□ -1.67
SCAF4-204ENST00000467731 TIMM17AQ99595 171 aa4.65□□□□□ -1.67
SCAF4-204ENST00000467731 TIMM21Q9BVV7 248 aa4.65□□□□□ -1.67
SCAF4-204ENST00000467731 IGLV4-3A0A075B6K6 122 aa4.65□□□□□ -1.67
SCAF4-204ENST00000467731 LY6G6CO95867 125 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms