RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 TSPAN13O95857 204 aa11.14□□□□□ -0.63
SRSF4-202ENST00000466448 LINC00173Q6ZV60 143 aa11.14□□□□□ -0.63
SRSF4-202ENST00000466448 XAGE1AQ9HD64 81 aa11.14□□□□□ -0.63
SRSF4-202ENST00000466448 NXT2Q9NPJ8 142 aaKnown RBP11.14□□□□□ -0.63
SRSF4-202ENST00000466448 A0A0U1RQV1 116 aa11.13□□□□□ -0.63
SRSF4-202ENST00000466448 NUPR1O60356 82 aa11.13□□□□□ -0.63
SRSF4-202ENST00000466448 APOC3P02656 99 aa11.13□□□□□ -0.63
SRSF4-202ENST00000466448 PRSS2P07478 247 aa11.13□□□□□ -0.63
SRSF4-202ENST00000466448 CKS1BP61024 79 aa11.13□□□□□ -0.63
SRSF4-202ENST00000466448 SVBPQ8N300 66 aa11.13□□□□□ -0.63
SRSF4-202ENST00000466448 C2orf88Q9BSF0 95 aa11.13□□□□□ -0.63
SRSF4-202ENST00000466448 TOMM7Q9P0U1 55 aa11.13□□□□□ -0.63
SRSF4-202ENST00000466448 SNAPINO95295 136 aa11.12□□□□□ -0.63
SRSF4-202ENST00000466448 ORMDL2Q53FV1 153 aa11.12□□□□□ -0.63
SRSF4-202ENST00000466448 Q6ZN92 141 aa11.12□□□□□ -0.63
SRSF4-202ENST00000466448 A0A087X002 238 aa11.11□□□□□ -0.63
SRSF4-202ENST00000466448 G0S2P27469 103 aa11.11□□□□□ -0.63
SRSF4-202ENST00000466448 LBHQ53QV2 105 aaPredicted RBP11.11□□□□□ -0.63
SRSF4-202ENST00000466448 C6orf226Q5I0X4 101 aa11.11□□□□□ -0.63
SRSF4-202ENST00000466448 C2orf66Q6UXQ4 117 aa11.11□□□□□ -0.63
SRSF4-202ENST00000466448 Q8IZM0 81 aa11.11□□□□□ -0.63
SRSF4-202ENST00000466448 AMELXQ99217 191 aa11.11□□□□□ -0.63
SRSF4-202ENST00000466448 CYSLTR1Q9Y271 337 aa11.11□□□□□ -0.63
SRSF4-202ENST00000466448 KIAA1644Q3SXP7 199 aa11.1□□□□□ -0.63
SRSF4-202ENST00000466448 KRTAP9-2Q9BYQ4 174 aa11.1□□□□□ -0.63
SRSF4-202ENST00000466448 VCX2Q9H322 139 aa11.1□□□□□ -0.63
SRSF4-202ENST00000466448 ALKBH7Q9BT30 221 aaPredicted RBP11.09□□□□□ -0.63
SRSF4-202ENST00000466448 FAM19A3Q7Z5A8 133 aa11.08□□□□□ -0.64
SRSF4-202ENST00000466448 BCE1O60756 84 aa11.07□□□□□ -0.64
SRSF4-202ENST00000466448 RPL28P46779 137 aaKnown RBP11.07□□□□□ -0.64
SRSF4-202ENST00000466448 FABP9Q0Z7S8 132 aa11.07□□□□□ -0.64
SRSF4-202ENST00000466448 MRPL55Q7Z7F7 128 aaKnown RBP11.07□□□□□ -0.64
SRSF4-202ENST00000466448 MRPL18Q9H0U6 180 aaKnown RBP11.07□□□□□ -0.64
SRSF4-202ENST00000466448 TP73-AS1Q9UF72 201 aa11.07□□□□□ -0.64
SRSF4-202ENST00000466448 IGIPA6NJ69 53 aa11.06□□□□□ -0.64
SRSF4-202ENST00000466448 F8VRH5 84 aa11.06□□□□□ -0.64
SRSF4-202ENST00000466448 NPSP0C0P6 89 aa11.06□□□□□ -0.64
SRSF4-202ENST00000466448 TYMSOSQ8TAI1 123 aa11.06□□□□□ -0.64
SRSF4-202ENST00000466448 CDKN2A-AS1Q9UH64 79 aa11.06□□□□□ -0.64
SRSF4-202ENST00000466448 CRYGAP11844 174 aa11.05□□□□□ -0.64
SRSF4-202ENST00000466448 HERVK_113P63121 156 aa11.03□□□□□ -0.64
SRSF4-202ENST00000466448 PAPPA-AS1Q5QFB9 102 aa11.03□□□□□ -0.64
SRSF4-202ENST00000466448 LCE2AQ5TA79 106 aaPredicted RBP11.03□□□□□ -0.64
SRSF4-202ENST00000466448 ANAPC11Q9NYG5 84 aa11.03□□□□□ -0.64
SRSF4-202ENST00000466448 TRAPPC1Q9Y5R8 145 aa11.03□□□□□ -0.64
SRSF4-202ENST00000466448 LINC01549A6NIU2 74 aa11.02□□□□□ -0.65
SRSF4-202ENST00000466448 RPL37AP8A6NKH3 93 aa11.02□□□□□ -0.65
SRSF4-202ENST00000466448 SEC11AP67812 179 aa11.01□□□□□ -0.65
SRSF4-202ENST00000466448 TOMM6Q96B49 74 aa11.01□□□□□ -0.65
SRSF4-202ENST00000466448 LINC00167Q96N53 147 aa11.01□□□□□ -0.65
SRSF4-202ENST00000466448 GEMIN7Q9H840 131 aaKnown RBP11.01□□□□□ -0.65
SRSF4-202ENST00000466448 LINC01546A6NGU7 62 aa11□□□□□ -0.65
SRSF4-202ENST00000466448 FA2HQ7L5A8 372 aa11□□□□□ -0.65
SRSF4-202ENST00000466448 TIMM17AQ99595 171 aa11□□□□□ -0.65
SRSF4-202ENST00000466448 SMCO4Q9NRQ5 59 aa11□□□□□ -0.65
SRSF4-202ENST00000466448 FAT4Q6V0I7 4981 aa11□□□□□ -0.65
SRSF4-202ENST00000466448 GAGE10A6NGK3 116 aa10.99□□□□□ -0.65
SRSF4-202ENST00000466448 CXCL5P42830 114 aa10.99□□□□□ -0.65
SRSF4-202ENST00000466448 KRTAP13-2Q52LG2 175 aa10.99□□□□□ -0.65
SRSF4-202ENST00000466448 ERASQ7Z444 233 aa10.98□□□□□ -0.65
SRSF4-202ENST00000466448 RETNLBQ9BQ08 111 aa10.98□□□□□ -0.65
SRSF4-202ENST00000466448 SMIM1B2RUZ4 78 aa10.97□□□□□ -0.65
SRSF4-202ENST00000466448 KRTAP13-1Q8IUC0 172 aa10.97□□□□□ -0.65
SRSF4-202ENST00000466448 SCGB3A1Q96QR1 104 aa10.97□□□□□ -0.65
SRSF4-202ENST00000466448 SLC7A5P1Q8MH63 180 aa10.95□□□□□ -0.66
SRSF4-202ENST00000466448 COX7B2Q8TF08 81 aa10.95□□□□□ -0.66
SRSF4-202ENST00000466448 IGLV5-37A0A075B6J1 123 aa10.94□□□□□ -0.66
SRSF4-202ENST00000466448 UBE2AP49459 152 aa10.94□□□□□ -0.66
SRSF4-202ENST00000466448 PDZD11Q5EBL8 140 aa10.94□□□□□ -0.66
SRSF4-202ENST00000466448 YPEL4Q96NS1 127 aa10.94□□□□□ -0.66
SRSF4-202ENST00000466448 RAB5BP61020 215 aa10.93□□□□□ -0.66
SRSF4-202ENST00000466448 FAM229BQ4G0N7 80 aa10.93□□□□□ -0.66
SRSF4-202ENST00000466448 LINC00304Q8N9R0 145 aa10.93□□□□□ -0.66
SRSF4-202ENST00000466448 C18orf32Q8TCD1 76 aa10.93□□□□□ -0.66
SRSF4-202ENST00000466448 TINCRA0A1B0GVN0 87 aa10.92□□□□□ -0.66
SRSF4-202ENST00000466448 LINC00614P0C842 121 aa10.92□□□□□ -0.66
SRSF4-202ENST00000466448 IGLV5-45A0A087WSX0 123 aa10.91□□□□□ -0.66
SRSF4-202ENST00000466448 NKAPP1Q8N9T2 125 aa10.91□□□□□ -0.66
SRSF4-202ENST00000466448 IGKV2-28A0A075B6P5 120 aa10.9□□□□□ -0.66
SRSF4-202ENST00000466448 SCO1O75880 301 aa10.9□□□□□ -0.66
SRSF4-202ENST00000466448 IGKV2D-28P01615 120 aa10.9□□□□□ -0.66
SRSF4-202ENST00000466448 TPRXLQ17RH7 258 aa10.9□□□□□ -0.66
SRSF4-202ENST00000466448 CBLN2Q8IUK8 224 aa10.9□□□□□ -0.66
SRSF4-202ENST00000466448 CDIP1Q9H305 208 aa10.9□□□□□ -0.66
SRSF4-202ENST00000466448 SPINK8P0C7L1 97 aa10.89□□□□□ -0.67
SRSF4-202ENST00000466448 CST9LQ9H4G1 147 aa10.88□□□□□ -0.67
SRSF4-202ENST00000466448 IGKV2D-26A0A0A0MRZ7 120 aa10.87□□□□□ -0.67
SRSF4-202ENST00000466448 HBDP02042 147 aa10.87□□□□□ -0.67
SRSF4-202ENST00000466448 PRLHP81277 87 aa10.87□□□□□ -0.67
SRSF4-202ENST00000466448 PMVKQ15126 192 aa10.87□□□□□ -0.67
SRSF4-202ENST00000466448 IGLV7-46A0A075B6I9 117 aa10.86□□□□□ -0.67
SRSF4-202ENST00000466448 URB1-AS1Q96HZ7 61 aa10.86□□□□□ -0.67
SRSF4-202ENST00000466448 MUC17Q685J3 4493 aa10.85□□□□□ -0.67
SRSF4-202ENST00000466448 A0A096LNJ9 63 aa10.84□□□□□ -0.67
SRSF4-202ENST00000466448 KRTAP9-6A0A140TA67 174 aa10.84□□□□□ -0.67
SRSF4-202ENST00000466448 ATP5LO75964 103 aa10.84□□□□□ -0.67
SRSF4-202ENST00000466448 CHCHD1Q96BP2 118 aaKnown RBP10.84□□□□□ -0.67
SRSF4-202ENST00000466448 TMEM238C9JI98 176 aa10.83□□□□□ -0.68
SRSF4-202ENST00000466448 PFN2P35080 140 aa10.83□□□□□ -0.68
SRSF4-202ENST00000466448 FAM19A1Q7Z5A9 133 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 209.5 ms