RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 PMCHL2Q9BQD1 86 aa9.29□□□□□ -0.92
HMGXB4-206ENST00000466438 CST9LQ9H4G1 147 aa9.29□□□□□ -0.92
HMGXB4-206ENST00000466438 A0A1B0GUV1 79 aa9.28□□□□□ -0.92
HMGXB4-206ENST00000466438 ZNF664Q8N3J9 261 aa9.28□□□□□ -0.92
HMGXB4-206ENST00000466438 MRPL35Q9NZE8 188 aaKnown RBP9.28□□□□□ -0.92
HMGXB4-206ENST00000466438 USP17L23D6RBM5 183 aa9.27□□□□□ -0.93
HMGXB4-206ENST00000466438 SEC11AP67812 179 aa9.27□□□□□ -0.93
HMGXB4-206ENST00000466438 REG3GQ6UW15 175 aa9.27□□□□□ -0.93
HMGXB4-206ENST00000466438 OPRPNQ99935 248 aaPredicted RBP9.27□□□□□ -0.93
HMGXB4-206ENST00000466438 CDC42SE2Q9NRR3 84 aa9.27□□□□□ -0.93
HMGXB4-206ENST00000466438 ATOH7Q8N100 152 aa9.26□□□□□ -0.93
HMGXB4-206ENST00000466438 C7orf33Q8WU49 177 aa9.26□□□□□ -0.93
HMGXB4-206ENST00000466438 C1orf43Q9BWL3 253 aa9.26□□□□□ -0.93
HMGXB4-206ENST00000466438 A0A087WYN8 130 aa9.25□□□□□ -0.93
HMGXB4-206ENST00000466438 RBX1P62877 108 aa9.25□□□□□ -0.93
HMGXB4-206ENST00000466438 MPV17L2Q567V2 206 aa9.25□□□□□ -0.93
HMGXB4-206ENST00000466438 RNASE13Q5GAN3 156 aaKnown RBP9.25□□□□□ -0.93
HMGXB4-206ENST00000466438 IGLV4-69A0A075B6H9 119 aa9.24□□□□□ -0.93
HMGXB4-206ENST00000466438 IGLC3P0DOY3 106 aa9.24□□□□□ -0.93
HMGXB4-206ENST00000466438 PRR3P79522 188 aaKnown RBP9.24□□□□□ -0.93
HMGXB4-206ENST00000466438 FAM104AQ969W3 186 aa9.24□□□□□ -0.93
HMGXB4-206ENST00000466438 PAM16Q9Y3D7 125 aa9.24□□□□□ -0.93
HMGXB4-206ENST00000466438 IGLV4-60A0A075B6I1 120 aa9.23□□□□□ -0.93
HMGXB4-206ENST00000466438 UBE2D1P51668 147 aa9.23□□□□□ -0.93
HMGXB4-206ENST00000466438 HERVK_113P61574 105 aa9.23□□□□□ -0.93
HMGXB4-206ENST00000466438 SPATA45Q537H7 98 aa9.23□□□□□ -0.93
HMGXB4-206ENST00000466438 ZC2HC1BQ5TFG8 222 aa9.23□□□□□ -0.93
HMGXB4-206ENST00000466438 DPH3Q96FX2 82 aa9.23□□□□□ -0.93
HMGXB4-206ENST00000466438 GEMIN7Q9H840 131 aaKnown RBP9.23□□□□□ -0.93
HMGXB4-206ENST00000466438 TINCRA0A1B0GVN0 87 aa9.22□□□□□ -0.93
HMGXB4-206ENST00000466438 TSTD3H0UI37 97 aa9.22□□□□□ -0.93
HMGXB4-206ENST00000466438 CCL25O15444 150 aa9.22□□□□□ -0.93
HMGXB4-206ENST00000466438 ANGP03950 147 aaKnown RBP9.22□□□□□ -0.93
HMGXB4-206ENST00000466438 HERVK_113P63121 156 aa9.22□□□□□ -0.93
HMGXB4-206ENST00000466438 SPINK6Q6UWN8 80 aa9.22□□□□□ -0.93
HMGXB4-206ENST00000466438 FAM19A3Q7Z5A8 133 aa9.22□□□□□ -0.93
HMGXB4-206ENST00000466438 FSIP2Q5CZC0 6907 aa9.21□□□□□ -0.93
HMGXB4-206ENST00000466438 TRAV13-1A0A0B4J241 112 aa9.21□□□□□ -0.94
HMGXB4-206ENST00000466438 hDV102S1A0JD36 115 aa9.21□□□□□ -0.94
HMGXB4-206ENST00000466438 C11orf86A6NJI1 115 aa9.21□□□□□ -0.94
HMGXB4-206ENST00000466438 TMEM170BQ5T4T1 132 aa9.21□□□□□ -0.94
HMGXB4-206ENST00000466438 SPACA4Q8TDM5 124 aa9.21□□□□□ -0.94
HMGXB4-206ENST00000466438 PLAC8Q9NZF1 115 aa9.21□□□□□ -0.94
HMGXB4-206ENST00000466438 H3BRM9 83 aa9.2□□□□□ -0.94
HMGXB4-206ENST00000466438 CRPP02741 224 aa9.2□□□□□ -0.94
HMGXB4-206ENST00000466438 CHTF8P0CG12 524 aa9.19□□□□□ -0.94
HMGXB4-206ENST00000466438 SS18Q15532 418 aa9.19□□□□□ -0.94
HMGXB4-206ENST00000466438 ENHOQ6UWT2 76 aa9.19□□□□□ -0.94
HMGXB4-206ENST00000466438 IGKV3OR2-268A0A0C4DH90 116 aa9.18□□□□□ -0.94
HMGXB4-206ENST00000466438 ZNF22P17026 224 aaPredicted RBP9.18□□□□□ -0.94
HMGXB4-206ENST00000466438 REG3AQ06141 175 aa9.18□□□□□ -0.94
HMGXB4-206ENST00000466438 MAJINQ3KP22 176 aa9.18□□□□□ -0.94
HMGXB4-206ENST00000466438 LINC00469Q8N7U9 141 aa9.18□□□□□ -0.94
HMGXB4-206ENST00000466438 CRCT1Q9UGL9 99 aa9.18□□□□□ -0.94
HMGXB4-206ENST00000466438 IGHV3-64A0A075B6Q5 118 aa9.17□□□□□ -0.94
HMGXB4-206ENST00000466438 IGLV5-45A0A087WSX0 123 aa9.17□□□□□ -0.94
HMGXB4-206ENST00000466438 LINC00959A0A1B0GUT2 108 aa9.17□□□□□ -0.94
HMGXB4-206ENST00000466438 CNBPP62633 177 aaKnown RBP9.17□□□□□ -0.94
HMGXB4-206ENST00000466438 LINC00242Q5T6M2 205 aa9.17□□□□□ -0.94
HMGXB4-206ENST00000466438 LINC00269Q8N2A0 174 aa9.17□□□□□ -0.94
HMGXB4-206ENST00000466438 STPG4Q8N801 248 aa9.17□□□□□ -0.94
HMGXB4-206ENST00000466438 E9PLD3 99 aa9.16□□□□□ -0.94
HMGXB4-206ENST00000466438 NMUP48645 174 aa9.16□□□□□ -0.94
HMGXB4-206ENST00000466438 CLPSL2Q6UWE3 100 aa9.16□□□□□ -0.94
HMGXB4-206ENST00000466438 TMEM223A0PJW6 202 aa9.15□□□□□ -0.94
HMGXB4-206ENST00000466438 ANKRD39Q53RE8 183 aa9.15□□□□□ -0.94
HMGXB4-206ENST00000466438 PRR34Q9NV39 138 aa9.15□□□□□ -0.94
HMGXB4-206ENST00000466438 TRAV8-4A0A0B4J246 113 aa9.14□□□□□ -0.95
HMGXB4-206ENST00000466438 MIAQ16674 131 aa9.14□□□□□ -0.95
HMGXB4-206ENST00000466438 PRO1933Q9H354 126 aa9.14□□□□□ -0.95
HMGXB4-206ENST00000466438 UQCR10Q9UDW1 63 aa9.14□□□□□ -0.95
HMGXB4-206ENST00000466438 COX8AP10176 69 aa9.13□□□□□ -0.95
HMGXB4-206ENST00000466438 SRSF9Q13242 221 aaKnown RBP eCLIP9.13□□□□□ -0.95
HMGXB4-206ENST00000466438 SLC25A34Q6PIV7 304 aa9.13□□□□□ -0.95
HMGXB4-206ENST00000466438 PLEKHB2Q96CS7 222 aa9.13□□□□□ -0.95
HMGXB4-206ENST00000466438 CDKN2A-AS1Q9UH64 79 aa9.13□□□□□ -0.95
HMGXB4-206ENST00000466438 LEPROTO15243 131 aa9.12□□□□□ -0.95
HMGXB4-206ENST00000466438 COX6A2Q02221 97 aa9.12□□□□□ -0.95
HMGXB4-206ENST00000466438 CD164L2Q6UWJ8 174 aa9.12□□□□□ -0.95
HMGXB4-206ENST00000466438 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.11□□□□□ -0.95
HMGXB4-206ENST00000466438 IGHV1-58A0A0C4DH39 117 aa9.11□□□□□ -0.95
HMGXB4-206ENST00000466438 SPINK8P0C7L1 97 aa9.11□□□□□ -0.95
HMGXB4-206ENST00000466438 LGALS3P17931 250 aaKnown RBP9.11□□□□□ -0.95
HMGXB4-206ENST00000466438 XCL1P47992 114 aa9.11□□□□□ -0.95
HMGXB4-206ENST00000466438 LINC01561Q8N1V8 128 aa9.11□□□□□ -0.95
HMGXB4-206ENST00000466438 CHCHD10Q8WYQ3 142 aaPredicted RBP9.11□□□□□ -0.95
HMGXB4-206ENST00000466438 C14orf144Q96I85 54 aa9.11□□□□□ -0.95
HMGXB4-206ENST00000466438 MIEN1Q9BRT3 115 aa9.11□□□□□ -0.95
HMGXB4-206ENST00000466438 A0A087WZ39 114 aa9.1□□□□□ -0.95
HMGXB4-206ENST00000466438 IGHV3OR16-9A0A0B4J2B5 98 aa9.1□□□□□ -0.95
HMGXB4-206ENST00000466438 DLEU1O43261 78 aa9.1□□□□□ -0.95
HMGXB4-206ENST00000466438 IGLV10-54A0A075B6I4 117 aa9.09□□□□□ -0.95
HMGXB4-206ENST00000466438 IGKV2D-26A0A0A0MRZ7 120 aa9.09□□□□□ -0.95
HMGXB4-206ENST00000466438 SMIM1B2RUZ4 78 aa9.09□□□□□ -0.95
HMGXB4-206ENST00000466438 J3QQQ9 107 aa9.09□□□□□ -0.95
HMGXB4-206ENST00000466438 COX7A2LO14548 114 aa9.09□□□□□ -0.95
HMGXB4-206ENST00000466438 KRTAP26-1Q6PEX3 210 aa9.09□□□□□ -0.95
HMGXB4-206ENST00000466438 BOD1L2Q8IYS8 172 aa9.09□□□□□ -0.95
HMGXB4-206ENST00000466438 PCP4L1A6NKN8 68 aa9.08□□□□□ -0.96
HMGXB4-206ENST00000466438 MALP21145 153 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms