RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 SRRM2Q9UQ35 2752 aaKnown RBP6.37□□□□□ -1.39
CD40-204ENST00000466205 PKHD1L1Q86WI1 4243 aa6.37□□□□□ -1.39
CD40-204ENST00000466205 FLG2Q5D862 2391 aaPredicted RBP6.37□□□□□ -1.39
CD40-204ENST00000466205 A0A096LNJ9 63 aa6.36□□□□□ -1.39
CD40-204ENST00000466205 KRTAP29-1A8MX34 341 aaPredicted RBP6.36□□□□□ -1.39
CD40-204ENST00000466205 NDUFA6P56556 154 aa6.36□□□□□ -1.39
CD40-204ENST00000466205 PRR3P79522 188 aaKnown RBP6.36□□□□□ -1.39
CD40-204ENST00000466205 PHF5AQ7RTV0 110 aaKnown RBP6.36□□□□□ -1.39
CD40-204ENST00000466205 LINC00469Q8N7U9 141 aa6.36□□□□□ -1.39
CD40-204ENST00000466205 HIST1H2BKO60814 126 aa6.35□□□□□ -1.39
CD40-204ENST00000466205 HIST1H2BJP06899 126 aa6.35□□□□□ -1.39
CD40-204ENST00000466205 LINC00614P0C842 121 aa6.35□□□□□ -1.39
CD40-204ENST00000466205 HIST1H2BOP23527 126 aa6.35□□□□□ -1.39
CD40-204ENST00000466205 HIST1H2BBP33778 126 aa6.35□□□□□ -1.39
CD40-204ENST00000466205 HIST1H2BDP58876 126 aa6.35□□□□□ -1.39
CD40-204ENST00000466205 LINC00310P59036 64 aa6.35□□□□□ -1.39
CD40-204ENST00000466205 CKS1BP61024 79 aa6.35□□□□□ -1.39
CD40-204ENST00000466205 HIST1H2BCP62807 126 aa6.35□□□□□ -1.39
CD40-204ENST00000466205 HIST2H2BEQ16778 126 aa6.35□□□□□ -1.39
CD40-204ENST00000466205 RNF151Q2KHN1 245 aa6.35□□□□□ -1.39
CD40-204ENST00000466205 C6orf226Q5I0X4 101 aa6.35□□□□□ -1.39
CD40-204ENST00000466205 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.35□□□□□ -1.39
CD40-204ENST00000466205 FAM19A5Q7Z5A7 132 aaPredicted RBP6.35□□□□□ -1.39
CD40-204ENST00000466205 FAM19A3Q7Z5A8 133 aa6.35□□□□□ -1.39
CD40-204ENST00000466205 HIST1H2BHQ93079 126 aa6.35□□□□□ -1.39
CD40-204ENST00000466205 HIST1H2BNQ99877 126 aa6.35□□□□□ -1.39
CD40-204ENST00000466205 HIST1H2BMQ99879 126 aa6.35□□□□□ -1.39
CD40-204ENST00000466205 CST9LQ9H4G1 147 aa6.35□□□□□ -1.39
CD40-204ENST00000466205 SPINK8P0C7L1 97 aa6.34□□□□□ -1.39
CD40-204ENST00000466205 SEC11AP67812 179 aa6.34□□□□□ -1.39
CD40-204ENST00000466205 PMVKQ15126 192 aa6.34□□□□□ -1.39
CD40-204ENST00000466205 LINC01561Q8N1V8 128 aa6.34□□□□□ -1.39
CD40-204ENST00000466205 TINCRA0A1B0GVN0 87 aa6.33□□□□□ -1.4
CD40-204ENST00000466205 SMIM1B2RUZ4 78 aa6.33□□□□□ -1.4
CD40-204ENST00000466205 F8WDY8 70 aa6.33□□□□□ -1.4
CD40-204ENST00000466205 HBDP02042 147 aa6.33□□□□□ -1.4
CD40-204ENST00000466205 Q8IZM0 81 aa6.33□□□□□ -1.4
CD40-204ENST00000466205 TRBV30A0A0K0K1B3 111 aa6.32□□□□□ -1.4
CD40-204ENST00000466205 TLX1NBP0CAT3 122 aa6.32□□□□□ -1.4
CD40-204ENST00000466205 LINC01549A6NIU2 74 aa6.31□□□□□ -1.4
CD40-204ENST00000466205 NDUFC2-KCTD14E9PQ53 114 aa6.31□□□□□ -1.4
CD40-204ENST00000466205 NUPR1O60356 82 aa6.31□□□□□ -1.4
CD40-204ENST00000466205 OXTP01178 125 aa6.31□□□□□ -1.4
CD40-204ENST00000466205 RAB5BP61020 215 aa6.31□□□□□ -1.4
CD40-204ENST00000466205 COA6Q5JTJ3 125 aaKnown RBP6.31□□□□□ -1.4
CD40-204ENST00000466205 C9orf129Q5T035 196 aaKnown RBP6.31□□□□□ -1.4
CD40-204ENST00000466205 COX7B2Q8TF08 81 aa6.31□□□□□ -1.4
CD40-204ENST00000466205 TMA7Q9Y2S6 64 aaKnown RBP6.31□□□□□ -1.4
CD40-204ENST00000466205 PDZD11Q5EBL8 140 aa6.3□□□□□ -1.4
CD40-204ENST00000466205 KRTAP11-1Q8IUC1 163 aa6.3□□□□□ -1.4
CD40-204ENST00000466205 KRTAP7-1Q8IUC3 87 aa6.3□□□□□ -1.4
CD40-204ENST00000466205 XAGE1AQ9HD64 81 aa6.3□□□□□ -1.4
CD40-204ENST00000466205 PSORS1C2Q9UIG4 136 aa6.3□□□□□ -1.4
CD40-204ENST00000466205 IGLV5-45A0A087WSX0 123 aa6.29□□□□□ -1.4
CD40-204ENST00000466205 TMEM238LA0A1B0GVL6 79 aa6.29□□□□□ -1.4
CD40-204ENST00000466205 F8VRH5 84 aa6.29□□□□□ -1.4
CD40-204ENST00000466205 M0QXV9 152 aa6.29□□□□□ -1.4
CD40-204ENST00000466205 IGLC3P0DOY3 106 aa6.29□□□□□ -1.4
CD40-204ENST00000466205 C1orf137Q5JT78 98 aa6.29□□□□□ -1.4
CD40-204ENST00000466205 BAGE3Q86Y29 109 aa6.29□□□□□ -1.4
CD40-204ENST00000466205 FAM19A2Q8N3H0 131 aa6.29□□□□□ -1.4
CD40-204ENST00000466205 C5orf52A6NGY3 159 aa6.28□□□□□ -1.4
CD40-204ENST00000466205 H3BRM9 83 aa6.28□□□□□ -1.4
CD40-204ENST00000466205 ATP5LO75964 103 aa6.28□□□□□ -1.4
CD40-204ENST00000466205 ZNF22P17026 224 aaPredicted RBP6.28□□□□□ -1.4
CD40-204ENST00000466205 UBE2BP63146 152 aa6.28□□□□□ -1.4
CD40-204ENST00000466205 SERTAD4-AS1Q5TG53 156 aa6.28□□□□□ -1.4
CD40-204ENST00000466205 C11orf86A6NJI1 115 aa6.27□□□□□ -1.41
CD40-204ENST00000466205 H0Y8G0 127 aa6.27□□□□□ -1.41
CD40-204ENST00000466205 HSBP1O75506 76 aa6.27□□□□□ -1.41
CD40-204ENST00000466205 CXCL5P42830 114 aa6.27□□□□□ -1.41
CD40-204ENST00000466205 TMEM170BQ5T4T1 132 aa6.27□□□□□ -1.41
CD40-204ENST00000466205 CHCHD1Q96BP2 118 aaKnown RBP6.27□□□□□ -1.41
CD40-204ENST00000466205 CHTOPQ9Y3Y2 248 aaKnown RBP6.27□□□□□ -1.41
CD40-204ENST00000466205 SERF1AO75920 110 aa6.26□□□□□ -1.41
CD40-204ENST00000466205 SPINK6Q6UWN8 80 aa6.26□□□□□ -1.41
CD40-204ENST00000466205 IFI27L1Q96BM0 104 aa6.26□□□□□ -1.41
CD40-204ENST00000466205 ZNF625Q96I27 306 aaPredicted RBP6.26□□□□□ -1.41
CD40-204ENST00000466205 DMBT1Q9UGM3 2413 aaPredicted RBP6.25□□□□□ -1.41
CD40-204ENST00000466205 MT1HL1P0DM35 61 aa6.25□□□□□ -1.41
CD40-204ENST00000466205 PFN2P35080 140 aa6.25□□□□□ -1.41
CD40-204ENST00000466205 SNRPEP62304 92 aaKnown RBP6.25□□□□□ -1.41
CD40-204ENST00000466205 SRSF9Q13242 221 aaKnown RBP eCLIP6.25□□□□□ -1.41
CD40-204ENST00000466205 ODF1Q14990 250 aa6.25□□□□□ -1.41
CD40-204ENST00000466205 HIST3H2BBQ8N257 126 aa6.25□□□□□ -1.41
CD40-204ENST00000466205 UBR4Q5T4S7 5183 aa6.24□□□□□ -1.41
CD40-204ENST00000466205 C22orf24Q9Y442 160 aa6.24□□□□□ -1.41
CD40-204ENST00000466205 IGLV5-39A0A0G2JS06 123 aa6.23□□□□□ -1.41
CD40-204ENST00000466205 LOC105371267A0A1B0GV96 52 aa6.23□□□□□ -1.41
CD40-204ENST00000466205 GAGE10A6NGK3 116 aa6.23□□□□□ -1.41
CD40-204ENST00000466205 IGLV7-43P04211 117 aa6.23□□□□□ -1.41
CD40-204ENST00000466205 SMCPP49901 116 aaPredicted RBP6.23□□□□□ -1.41
CD40-204ENST00000466205 HMCN2Q8NDA2 5059 aa6.23□□□□□ -1.41
CD40-204ENST00000466205 FABP4P15090 132 aa6.22□□□□□ -1.41
CD40-204ENST00000466205 REG3GQ6UW15 175 aa6.22□□□□□ -1.41
CD40-204ENST00000466205 TRAV12-1A0A0B4J245 112 aa6.21□□□□□ -1.42
CD40-204ENST00000466205 A0A0U1RRA0 63 aa6.21□□□□□ -1.42
CD40-204ENST00000466205 TMEM223A0PJW6 202 aa6.21□□□□□ -1.42
CD40-204ENST00000466205 RPL37AP8A6NKH3 93 aa6.21□□□□□ -1.42
CD40-204ENST00000466205 LEPROTL1O95214 131 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms