RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 SUMO2P61956 95 aaKnown RBP6.97□□□□□ -1.29
CNOT4-208ENST00000465721 UBE2BP63146 152 aa6.97□□□□□ -1.29
CNOT4-208ENST00000465721 GAGE2EQ4V326 116 aa6.97□□□□□ -1.29
CNOT4-208ENST00000465721 GAGE2DQ9UEU5 116 aa6.97□□□□□ -1.29
CNOT4-208ENST00000465721 S100A2P29034 98 aa6.96□□□□□ -1.3
CNOT4-208ENST00000465721 KIR2DL4Q99706 377 aa6.96□□□□□ -1.3
CNOT4-208ENST00000465721 TSPAN13O95857 204 aa6.95□□□□□ -1.3
CNOT4-208ENST00000465721 C9orf129Q5T035 196 aaKnown RBP6.95□□□□□ -1.3
CNOT4-208ENST00000465721 PPP1R17O96001 155 aa6.94□□□□□ -1.3
CNOT4-208ENST00000465721 RPL39P62891 51 aaKnown RBP6.94□□□□□ -1.3
CNOT4-208ENST00000465721 KIAA0087Q14695 138 aa6.94□□□□□ -1.3
CNOT4-208ENST00000465721 HIST3H2BBQ8N257 126 aa6.94□□□□□ -1.3
CNOT4-208ENST00000465721 CDIP1Q9H305 208 aa6.94□□□□□ -1.3
CNOT4-208ENST00000465721 A0A087X002 238 aa6.93□□□□□ -1.3
CNOT4-208ENST00000465721 PCP4L1A6NKN8 68 aa6.93□□□□□ -1.3
CNOT4-208ENST00000465721 ZNF861PO60384 105 aa6.93□□□□□ -1.3
CNOT4-208ENST00000465721 COA6Q5JTJ3 125 aaKnown RBP6.93□□□□□ -1.3
CNOT4-208ENST00000465721 TMEM18Q96B42 140 aa6.93□□□□□ -1.3
CNOT4-208ENST00000465721 TRBV30A0A0K0K1B3 111 aa6.92□□□□□ -1.3
CNOT4-208ENST00000465721 IFITM10A6NMD0 228 aa6.92□□□□□ -1.3
CNOT4-208ENST00000465721 NDUFC2-KCTD14E9PQ53 114 aa6.92□□□□□ -1.3
CNOT4-208ENST00000465721 MRPS36P82909 103 aaKnown RBP6.92□□□□□ -1.3
CNOT4-208ENST00000465721 C21orf62-AS1Q17RA5 79 aa6.92□□□□□ -1.3
CNOT4-208ENST00000465721 OSTCQ9NRP0 149 aa6.92□□□□□ -1.3
CNOT4-208ENST00000465721 SPANXA1Q9NS26 97 aa6.92□□□□□ -1.3
CNOT4-208ENST00000465721 RPL32P62910 135 aaKnown RBP6.91□□□□□ -1.3
CNOT4-208ENST00000465721 HBBP68871 147 aa6.91□□□□□ -1.3
CNOT4-208ENST00000465721 RIGQ13278 110 aa6.91□□□□□ -1.3
CNOT4-208ENST00000465721 COX19Q49B96 90 aa6.91□□□□□ -1.3
CNOT4-208ENST00000465721 MRPL51Q4U2R6 128 aaKnown RBP6.91□□□□□ -1.3
CNOT4-208ENST00000465721 C2orf82Q6UX34 121 aa6.91□□□□□ -1.3
CNOT4-208ENST00000465721 TRAPPC1Q9Y5R8 145 aa6.91□□□□□ -1.3
CNOT4-208ENST00000465721 FSIP2Q5CZC0 6907 aa6.91□□□□□ -1.3
CNOT4-208ENST00000465721 FAM104BQ5XKR9 115 aa6.9□□□□□ -1.3
CNOT4-208ENST00000465721 C20orf78Q9BR46 151 aa6.9□□□□□ -1.3
CNOT4-208ENST00000465721 SMIM2Q9BVW6 85 aa6.9□□□□□ -1.3
CNOT4-208ENST00000465721 V9GYV3 84 aa6.9□□□□□ -1.3
CNOT4-208ENST00000465721 NUPR1O60356 82 aa6.89□□□□□ -1.31
CNOT4-208ENST00000465721 FABP4P15090 132 aa6.89□□□□□ -1.31
CNOT4-208ENST00000465721 TCAPO15273 167 aa6.88□□□□□ -1.31
CNOT4-208ENST00000465721 PYY3Q5JQD4 70 aa6.88□□□□□ -1.31
CNOT4-208ENST00000465721 LINC00242Q5T6M2 205 aa6.88□□□□□ -1.31
CNOT4-208ENST00000465721 PACRGQ96M98 296 aaPredicted RBP6.88□□□□□ -1.31
CNOT4-208ENST00000465721 HIST1H2BLQ99880 126 aa6.88□□□□□ -1.31
CNOT4-208ENST00000465721 SMIM27A0A1W2PRY6 76 aa6.87□□□□□ -1.31
CNOT4-208ENST00000465721 TNFRSF6BO95407 300 aa6.87□□□□□ -1.31
CNOT4-208ENST00000465721 PDZD11Q5EBL8 140 aa6.87□□□□□ -1.31
CNOT4-208ENST00000465721 TYMSOSQ8TAI1 123 aa6.87□□□□□ -1.31
CNOT4-208ENST00000465721 RETNLBQ9BQ08 111 aa6.87□□□□□ -1.31
CNOT4-208ENST00000465721 GNB1LQ9BYB4 327 aa6.87□□□□□ -1.31
CNOT4-208ENST00000465721 C22orf24Q9Y442 160 aa6.87□□□□□ -1.31
CNOT4-208ENST00000465721 CRYGAP11844 174 aa6.86□□□□□ -1.31
CNOT4-208ENST00000465721 CKS2P33552 79 aa6.86□□□□□ -1.31
CNOT4-208ENST00000465721 KRTAP13-2Q52LG2 175 aa6.86□□□□□ -1.31
CNOT4-208ENST00000465721 NAT8BQ9UHF3 227 aa6.86□□□□□ -1.31
CNOT4-208ENST00000465721 IGLV4-3A0A075B6K6 122 aa6.85□□□□□ -1.31
CNOT4-208ENST00000465721 NPYP01303 97 aa6.85□□□□□ -1.31
CNOT4-208ENST00000465721 JOSD1Q15040 202 aaPredicted RBP6.85□□□□□ -1.31
CNOT4-208ENST00000465721 TPRXLQ17RH7 258 aa6.85□□□□□ -1.31
CNOT4-208ENST00000465721 LINC00469Q8N7U9 141 aa6.85□□□□□ -1.31
CNOT4-208ENST00000465721 D6R8Y8 96 aa6.84□□□□□ -1.31
CNOT4-208ENST00000465721 BCE1O60756 84 aa6.84□□□□□ -1.31
CNOT4-208ENST00000465721 IFI27P40305 119 aaPredicted RBP6.84□□□□□ -1.31
CNOT4-208ENST00000465721 RPL28P46779 137 aaKnown RBP6.84□□□□□ -1.31
CNOT4-208ENST00000465721 LINC00310P59036 64 aa6.84□□□□□ -1.31
CNOT4-208ENST00000465721 LINC01561Q8N1V8 128 aa6.84□□□□□ -1.31
CNOT4-208ENST00000465721 XAGE1AQ9HD64 81 aa6.84□□□□□ -1.31
CNOT4-208ENST00000465721 PYGO1Q9Y3Y4 419 aa6.84□□□□□ -1.31
CNOT4-208ENST00000465721 CTAG1AP78358 180 aa6.83□□□□□ -1.32
CNOT4-208ENST00000465721 LBHQ53QV2 105 aaPredicted RBP6.83□□□□□ -1.32
CNOT4-208ENST00000465721 TMEM136Q6ZRR5 245 aa6.83□□□□□ -1.32
CNOT4-208ENST00000465721 ANAPC11Q9NYG5 84 aa6.83□□□□□ -1.32
CNOT4-208ENST00000465721 TP73-AS1Q9UF72 201 aa6.83□□□□□ -1.32
CNOT4-208ENST00000465721 LINC00587B1AMM8 73 aa6.82□□□□□ -1.32
CNOT4-208ENST00000465721 LINC00173Q6ZV60 143 aa6.82□□□□□ -1.32
CNOT4-208ENST00000465721 MRPL55Q7Z7F7 128 aaKnown RBP6.82□□□□□ -1.32
CNOT4-208ENST00000465721 KRTAP13-1Q8IUC0 172 aa6.82□□□□□ -1.32
CNOT4-208ENST00000465721 TMEM141Q96I45 108 aa6.82□□□□□ -1.32
CNOT4-208ENST00000465721 A0A1B0GW15 77 aa6.81□□□□□ -1.32
CNOT4-208ENST00000465721 ATP5L2Q7Z4Y8 100 aa6.81□□□□□ -1.32
CNOT4-208ENST00000465721 Q8IZM0 81 aa6.81□□□□□ -1.32
CNOT4-208ENST00000465721 LINC00304Q8N9R0 145 aa6.81□□□□□ -1.32
CNOT4-208ENST00000465721 A0A1B0GXF2 115 aa6.8□□□□□ -1.32
CNOT4-208ENST00000465721 TSTD3H0UI37 97 aa6.8□□□□□ -1.32
CNOT4-208ENST00000465721 PRSS2P07478 247 aa6.8□□□□□ -1.32
CNOT4-208ENST00000465721 CKS1BP61024 79 aa6.8□□□□□ -1.32
CNOT4-208ENST00000465721 ZC2HC1BQ5TFG8 222 aa6.8□□□□□ -1.32
CNOT4-208ENST00000465721 MRPL54Q6P161 138 aaKnown RBP6.8□□□□□ -1.32
CNOT4-208ENST00000465721 TEX43Q6ZNM6 134 aa6.8□□□□□ -1.32
CNOT4-208ENST00000465721 BAGE3Q86Y29 109 aa6.8□□□□□ -1.32
CNOT4-208ENST00000465721 TOMM7Q9P0U1 55 aa6.8□□□□□ -1.32
CNOT4-208ENST00000465721 IGLV7-46A0A075B6I9 117 aa6.79□□□□□ -1.32
CNOT4-208ENST00000465721 SERF1AO75920 110 aa6.79□□□□□ -1.32
CNOT4-208ENST00000465721 PPBPP02775 128 aa6.79□□□□□ -1.32
CNOT4-208ENST00000465721 FAM229BQ4G0N7 80 aa6.79□□□□□ -1.32
CNOT4-208ENST00000465721 Q6ZN92 141 aa6.79□□□□□ -1.32
CNOT4-208ENST00000465721 RPL37AP8A6NKH3 93 aa6.78□□□□□ -1.32
CNOT4-208ENST00000465721 FAM19A3Q7Z5A8 133 aa6.78□□□□□ -1.32
CNOT4-208ENST00000465721 LINC00167Q96N53 147 aa6.78□□□□□ -1.32
CNOT4-208ENST00000465721 AMELXQ99217 191 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms