RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 LYRM9A8MSI8 78 aa12.92□□□□□ -0.34
TSPAN4-210ENST00000464987 LINC00158P58513 81 aa12.92□□□□□ -0.34
TSPAN4-210ENST00000464987 A0A1B0GUV1 79 aa12.91□□□□□ -0.34
TSPAN4-210ENST00000464987 PFN2P35080 140 aa12.91□□□□□ -0.34
TSPAN4-210ENST00000464987 IGKV2-28A0A075B6P5 120 aa12.9□□□□□ -0.34
TSPAN4-210ENST00000464987 COX7A2LO14548 114 aa12.9□□□□□ -0.34
TSPAN4-210ENST00000464987 IGKV2D-28P01615 120 aa12.9□□□□□ -0.34
TSPAN4-210ENST00000464987 LINC00337Q8N6G1 96 aa12.9□□□□□ -0.34
TSPAN4-210ENST00000464987 UBE2WQ96B02 151 aa12.9□□□□□ -0.34
TSPAN4-210ENST00000464987 H3BT86 120 aa12.89□□□□□ -0.35
TSPAN4-210ENST00000464987 APOC4P55056 127 aa12.89□□□□□ -0.35
TSPAN4-210ENST00000464987 Q8NAQ8 132 aa12.89□□□□□ -0.35
TSPAN4-210ENST00000464987 SND1-IT1Q9HBX3 110 aa12.89□□□□□ -0.35
TSPAN4-210ENST00000464987 CCL18P55774 89 aa12.88□□□□□ -0.35
TSPAN4-210ENST00000464987 DAD1P61803 113 aa12.88□□□□□ -0.35
TSPAN4-210ENST00000464987 SS18Q15532 418 aa12.88□□□□□ -0.35
TSPAN4-210ENST00000464987 FAM218AQ96MZ4 157 aa12.88□□□□□ -0.35
TSPAN4-210ENST00000464987 LINC00269Q8N2A0 174 aa12.87□□□□□ -0.35
TSPAN4-210ENST00000464987 ANK2Q01484 3957 aa12.87□□□□□ -0.35
TSPAN4-210ENST00000464987 C6orf226Q5I0X4 101 aa12.86□□□□□ -0.35
TSPAN4-210ENST00000464987 PPDPFQ9H3Y8 114 aa12.86□□□□□ -0.35
TSPAN4-210ENST00000464987 IGLV10-54A0A075B6I4 117 aa12.85□□□□□ -0.35
TSPAN4-210ENST00000464987 IBA57-AS1B1ANH7 110 aa12.85□□□□□ -0.35
TSPAN4-210ENST00000464987 IGHV4-30-4P0DP06 118 aa12.85□□□□□ -0.35
TSPAN4-210ENST00000464987 NDUFV3P56181 108 aaKnown RBP12.85□□□□□ -0.35
TSPAN4-210ENST00000464987 CRPP02741 224 aa12.84□□□□□ -0.35
TSPAN4-210ENST00000464987 HTN3P15516 51 aa12.84□□□□□ -0.35
TSPAN4-210ENST00000464987 SMIM20Q8N5G0 67 aa12.84□□□□□ -0.35
TSPAN4-210ENST00000464987 TRAV13-2A0A0B4J235 113 aa12.83□□□□□ -0.36
TSPAN4-210ENST00000464987 TRAV8-4A0A0B4J246 113 aa12.82□□□□□ -0.36
TSPAN4-210ENST00000464987 ANGP03950 147 aaKnown RBP12.82□□□□□ -0.36
TSPAN4-210ENST00000464987 ATP5G1P05496 136 aa12.82□□□□□ -0.36
TSPAN4-210ENST00000464987 GAGE2BQ13066 116 aa12.82□□□□□ -0.36
TSPAN4-210ENST00000464987 GAGE2EQ4V326 116 aa12.82□□□□□ -0.36
TSPAN4-210ENST00000464987 Q6Q795 121 aa12.82□□□□□ -0.36
TSPAN4-210ENST00000464987 GAGE2DQ9UEU5 116 aa12.82□□□□□ -0.36
TSPAN4-210ENST00000464987 F8P00451 2351 aa12.82□□□□□ -0.36
TSPAN4-210ENST00000464987 WFDC9Q8NEX5 89 aa12.82□□□□□ -0.36
TSPAN4-210ENST00000464987 MIFP14174 115 aa12.81□□□□□ -0.36
TSPAN4-210ENST00000464987 CCDC179H3BU77 68 aa12.81□□□□□ -0.36
TSPAN4-210ENST00000464987 RPL28P46779 137 aaKnown RBP12.81□□□□□ -0.36
TSPAN4-210ENST00000464987 Q8IZM0 81 aa12.81□□□□□ -0.36
TSPAN4-210ENST00000464987 REG3AQ06141 175 aa12.8□□□□□ -0.36
TSPAN4-210ENST00000464987 SMIM11BQ8TCY0 68 aa12.8□□□□□ -0.36
TSPAN4-210ENST00000464987 CHCHD10Q8WYQ3 142 aaPredicted RBP12.8□□□□□ -0.36
TSPAN4-210ENST00000464987 CMYA5Q8N3K9 4069 aa12.8□□□□□ -0.36
TSPAN4-210ENST00000464987 KIAA0087Q14695 138 aa12.78□□□□□ -0.36
TSPAN4-210ENST00000464987 Q9HAA7 133 aa12.78□□□□□ -0.36
TSPAN4-210ENST00000464987 SNCGO76070 127 aa12.78□□□□□ -0.36
TSPAN4-210ENST00000464987 SPART-AS1P0CW21 52 aa12.78□□□□□ -0.36
TSPAN4-210ENST00000464987 TTC32Q5I0X7 151 aa12.78□□□□□ -0.36
TSPAN4-210ENST00000464987 CD164L2Q6UWJ8 174 aa12.78□□□□□ -0.36
TSPAN4-210ENST00000464987 C22orf24Q9Y442 160 aa12.78□□□□□ -0.36
TSPAN4-210ENST00000464987 TRACP01848 142 aa12.77□□□□□ -0.37
TSPAN4-210ENST00000464987 OXLD1Q5BKU9 147 aa12.77□□□□□ -0.37
TSPAN4-210ENST00000464987 DEFB121Q5J5C9 76 aa12.76□□□□□ -0.37
TSPAN4-210ENST00000464987 WIPF1O43516 503 aa12.76□□□□□ -0.37
TSPAN4-210ENST00000464987 A0A087WYN8 130 aa12.75□□□□□ -0.37
TSPAN4-210ENST00000464987 BAALC-AS2P0C853 105 aa12.75□□□□□ -0.37
TSPAN4-210ENST00000464987 C9orf116Q5BN46 136 aaPredicted RBP12.75□□□□□ -0.37
TSPAN4-210ENST00000464987 MRPL23Q16540 153 aaKnown RBP12.74□□□□□ -0.37
TSPAN4-210ENST00000464987 PKD1L1Q8TDX9 2849 aa12.74□□□□□ -0.37
TSPAN4-210ENST00000464987 PRR3P79522 188 aaKnown RBP12.74□□□□□ -0.37
TSPAN4-210ENST00000464987 OR13C6PQ8NH95 151 aa12.74□□□□□ -0.37
TSPAN4-210ENST00000464987 RETNQ9HD89 108 aa12.74□□□□□ -0.37
TSPAN4-210ENST00000464987 LINC01561Q8N1V8 128 aa12.73□□□□□ -0.37
TSPAN4-210ENST00000464987 MALP21145 153 aa12.73□□□□□ -0.37
TSPAN4-210ENST00000464987 KRTAP10-11P60412 298 aa12.72□□□□□ -0.37
TSPAN4-210ENST00000464987 LELP1Q5T871 98 aa12.72□□□□□ -0.37
TSPAN4-210ENST00000464987 LINC00526Q96FQ7 95 aa12.72□□□□□ -0.37
TSPAN4-210ENST00000464987 C15orf53Q8NAA6 179 aa12.71□□□□□ -0.37
TSPAN4-210ENST00000464987 FBN1P35555 2871 aaKnown RBP12.7□□□□□ -0.38
TSPAN4-210ENST00000464987 C6orf223Q8N319 242 aa12.7□□□□□ -0.38
TSPAN4-210ENST00000464987 KLK12Q9UKR0 248 aa12.7□□□□□ -0.38
TSPAN4-210ENST00000464987 C10orf25Q5T742 122 aa12.68□□□□□ -0.38
TSPAN4-210ENST00000464987 Q8NDZ9 215 aa12.68□□□□□ -0.38
TSPAN4-210ENST00000464987 C9orf129Q5T035 196 aaKnown RBP12.67□□□□□ -0.38
TSPAN4-210ENST00000464987 TMEM126AQ9H061 195 aa12.67□□□□□ -0.38
TSPAN4-210ENST00000464987 STAB1Q9NY15 2570 aa12.67□□□□□ -0.38
TSPAN4-210ENST00000464987 LYPD5Q6UWN5 251 aa12.66□□□□□ -0.38
TSPAN4-210ENST00000464987 ENHOQ6UWT2 76 aa12.66□□□□□ -0.38
TSPAN4-210ENST00000464987 TENM3Q9P273 2699 aa12.66□□□□□ -0.38
TSPAN4-210ENST00000464987 FAM240AA0A1B0GVK7 77 aa12.66□□□□□ -0.38
TSPAN4-210ENST00000464987 LECT2O14960 151 aa12.66□□□□□ -0.38
TSPAN4-210ENST00000464987 NANOS2P60321 138 aaKnown RBP12.66□□□□□ -0.38
TSPAN4-210ENST00000464987 CXCL5P42830 114 aa12.65□□□□□ -0.38
TSPAN4-210ENST00000464987 UNQ6190/PRO20217Q6UXQ8 127 aa12.65□□□□□ -0.38
TSPAN4-210ENST00000464987 PRR34Q9NV39 138 aa12.65□□□□□ -0.38
TSPAN4-210ENST00000464987 H0YGX0 51 aa12.64□□□□□ -0.39
TSPAN4-210ENST00000464987 DNAL4O96015 105 aa12.64□□□□□ -0.39
TSPAN4-210ENST00000464987 SLPIP03973 132 aa12.64□□□□□ -0.39
TSPAN4-210ENST00000464987 COX17Q14061 63 aa12.64□□□□□ -0.39
TSPAN4-210ENST00000464987 KRTAP24-1Q3LI83 254 aa12.64□□□□□ -0.39
TSPAN4-210ENST00000464987 SPAG11BQ08648 103 aa12.63□□□□□ -0.39
TSPAN4-210ENST00000464987 Q6ZTC4 211 aa12.62□□□□□ -0.39
TSPAN4-210ENST00000464987 WFDC10BQ8IUB3 73 aa12.61□□□□□ -0.39
TSPAN4-210ENST00000464987 SMCR5Q8TEV8 140 aa12.61□□□□□ -0.39
TSPAN4-210ENST00000464987 KLK5Q9Y337 293 aaPredicted RBP12.61□□□□□ -0.39
TSPAN4-210ENST00000464987 NCR3O14931 201 aa12.61□□□□□ -0.39
TSPAN4-210ENST00000464987 KPRPQ5T749 579 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms