RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 A0A087WZ39 114 aa14.96□□□□□ -0.01
PDLIM2-216ENST00000464275 NPC2P61916 151 aa14.96□□□□□ -0.01
PDLIM2-216ENST00000464275 LELP1Q5T871 98 aa14.96□□□□□ -0.01
PDLIM2-216ENST00000464275 C2orf82Q6UX34 121 aa14.96□□□□□ -0.01
PDLIM2-216ENST00000464275 COX7B2Q8TF08 81 aa14.96□□□□□ -0.01
PDLIM2-216ENST00000464275 UBE2WQ96B02 151 aa14.96□□□□□ -0.01
PDLIM2-216ENST00000464275 DNAH3Q8TD57 4116 aa14.95□□□□□ -0.02
PDLIM2-216ENST00000464275 H3BNG1 76 aa14.94□□□□□ -0.02
PDLIM2-216ENST00000464275 XGP55808 180 aa14.94□□□□□ -0.02
PDLIM2-216ENST00000464275 MEIG1Q5JSS6 88 aa14.94□□□□□ -0.02
PDLIM2-216ENST00000464275 DAND5Q8N907 189 aa14.93□□□□□ -0.02
PDLIM2-216ENST00000464275 MT-ATP8P03928 68 aa14.92□□□□□ -0.02
PDLIM2-216ENST00000464275 C5orf38Q86SI9 138 aa14.92□□□□□ -0.02
PDLIM2-216ENST00000464275 LINC00269Q8N2A0 174 aa14.91□□□□□ -0.02
PDLIM2-216ENST00000464275 COX7A2LO14548 114 aa14.91□□□□□ -0.02
PDLIM2-216ENST00000464275 ANGP03950 147 aaKnown RBP14.91□□□□□ -0.02
PDLIM2-216ENST00000464275 CLPSL2Q6UWE3 100 aa14.91□□□□□ -0.02
PDLIM2-216ENST00000464275 LINC01561Q8N1V8 128 aa14.91□□□□□ -0.02
PDLIM2-216ENST00000464275 A0A0J9YWU9 116 aa14.9□□□□□ -0.02
PDLIM2-216ENST00000464275 XCL1P47992 114 aa14.9□□□□□ -0.02
PDLIM2-216ENST00000464275 Q6ZTC4 211 aa14.9□□□□□ -0.02
PDLIM2-216ENST00000464275 TOMM7Q9P0U1 55 aa14.9□□□□□ -0.02
PDLIM2-216ENST00000464275 DEFB121Q5J5C9 76 aa14.89□□□□□ -0.03
PDLIM2-216ENST00000464275 LYPD5Q6UWN5 251 aa14.89□□□□□ -0.03
PDLIM2-216ENST00000464275 CLEC2BQ92478 149 aa14.89□□□□□ -0.03
PDLIM2-216ENST00000464275 PKD1L1Q8TDX9 2849 aa14.88□□□□□ -0.03
PDLIM2-216ENST00000464275 TRAV8-4A0A0B4J246 113 aa14.88□□□□□ -0.03
PDLIM2-216ENST00000464275 REG3AQ06141 175 aa14.88□□□□□ -0.03
PDLIM2-216ENST00000464275 KPRPQ5T749 579 aaPredicted RBP14.88□□□□□ -0.03
PDLIM2-216ENST00000464275 FAM240AA0A1B0GVK7 77 aa14.87□□□□□ -0.03
PDLIM2-216ENST00000464275 SOSTDC1Q6X4U4 206 aa14.87□□□□□ -0.03
PDLIM2-216ENST00000464275 TEX49A0A1B0GTD5 131 aa14.87□□□□□ -0.03
PDLIM2-216ENST00000464275 CKS1BP61024 79 aa14.87□□□□□ -0.03
PDLIM2-216ENST00000464275 Q8N3U1 123 aa14.87□□□□□ -0.03
PDLIM2-216ENST00000464275 TRAV13-2A0A0B4J235 113 aa14.86□□□□□ -0.03
PDLIM2-216ENST00000464275 CD164L2Q6UWJ8 174 aa14.86□□□□□ -0.03
PDLIM2-216ENST00000464275 C11orf45Q8TAV5 145 aa14.85□□□□□ -0.03
PDLIM2-216ENST00000464275 A0A0U1RRA0 63 aa14.85□□□□□ -0.03
PDLIM2-216ENST00000464275 TRACP01848 142 aa14.85□□□□□ -0.03
PDLIM2-216ENST00000464275 CHCHD10Q8WYQ3 142 aaPredicted RBP14.85□□□□□ -0.03
PDLIM2-216ENST00000464275 COL6A5A8TX70 2615 aa14.85□□□□□ -0.03
PDLIM2-216ENST00000464275 NANOS2P60321 138 aaKnown RBP14.84□□□□□ -0.03
PDLIM2-216ENST00000464275 K7EIL1 84 aa14.83□□□□□ -0.04
PDLIM2-216ENST00000464275 PRB2P02812 416 aaPredicted RBP14.83□□□□□ -0.04
PDLIM2-216ENST00000464275 SNCGO76070 127 aa14.82□□□□□ -0.04
PDLIM2-216ENST00000464275 Q8IZM0 81 aa14.82□□□□□ -0.04
PDLIM2-216ENST00000464275 DEFB131BA0A096LNP1 70 aa14.81□□□□□ -0.04
PDLIM2-216ENST00000464275 IBA57-AS1B1ANH7 110 aa14.81□□□□□ -0.04
PDLIM2-216ENST00000464275 C6orf226Q5I0X4 101 aa14.81□□□□□ -0.04
PDLIM2-216ENST00000464275 Q6Q795 121 aa14.81□□□□□ -0.04
PDLIM2-216ENST00000464275 TM2D3Q9BRN9 247 aa14.81□□□□□ -0.04
PDLIM2-216ENST00000464275 CRPP02741 224 aa14.8□□□□□ -0.04
PDLIM2-216ENST00000464275 PRR34Q9NV39 138 aa14.8□□□□□ -0.04
PDLIM2-216ENST00000464275 IGLV10-54A0A075B6I4 117 aa14.79□□□□□ -0.04
PDLIM2-216ENST00000464275 ANK2Q01484 3957 aa14.79□□□□□ -0.04
PDLIM2-216ENST00000464275 RPL28P46779 137 aaKnown RBP14.78□□□□□ -0.04
PDLIM2-216ENST00000464275 KLK12Q9UKR0 248 aa14.78□□□□□ -0.04
PDLIM2-216ENST00000464275 ACYP1P07311 99 aa14.77□□□□□ -0.04
PDLIM2-216ENST00000464275 MIR7-3HGQ8N6C7 128 aa14.77□□□□□ -0.04
PDLIM2-216ENST00000464275 MALP21145 153 aa14.76□□□□□ -0.05
PDLIM2-216ENST00000464275 LINC00158P58513 81 aa14.76□□□□□ -0.05
PDLIM2-216ENST00000464275 GAGE2BQ13066 116 aa14.76□□□□□ -0.05
PDLIM2-216ENST00000464275 GAGE2EQ4V326 116 aa14.76□□□□□ -0.05
PDLIM2-216ENST00000464275 GAGE2DQ9UEU5 116 aa14.76□□□□□ -0.05
PDLIM2-216ENST00000464275 SND1-IT1Q9HBX3 110 aa14.75□□□□□ -0.05
PDLIM2-216ENST00000464275 ENHOQ6UWT2 76 aa14.74□□□□□ -0.05
PDLIM2-216ENST00000464275 WFDC10BQ8IUB3 73 aa14.74□□□□□ -0.05
PDLIM2-216ENST00000464275 MRAPQ8TCY5 172 aa14.74□□□□□ -0.05
PDLIM2-216ENST00000464275 CXCL5P42830 114 aa14.73□□□□□ -0.05
PDLIM2-216ENST00000464275 KIAA0087Q14695 138 aa14.73□□□□□ -0.05
PDLIM2-216ENST00000464275 ESRGQ1W209 222 aa14.73□□□□□ -0.05
PDLIM2-216ENST00000464275 CFAP161Q6P656 301 aa14.73□□□□□ -0.05
PDLIM2-216ENST00000464275 MDFIQ99750 246 aa14.73□□□□□ -0.05
PDLIM2-216ENST00000464275 TENM3Q9P273 2699 aa14.72□□□□□ -0.05
PDLIM2-216ENST00000464275 TRAV10A0A0B4J240 114 aa14.72□□□□□ -0.05
PDLIM2-216ENST00000464275 C15orf53Q8NAA6 179 aa14.71□□□□□ -0.05
PDLIM2-216ENST00000464275 PFN2P35080 140 aa14.7□□□□□ -0.06
PDLIM2-216ENST00000464275 KLK5Q9Y337 293 aaPredicted RBP14.7□□□□□ -0.06
PDLIM2-216ENST00000464275 H0YGX0 51 aa14.69□□□□□ -0.06
PDLIM2-216ENST00000464275 IGKV2-28A0A075B6P5 120 aa14.69□□□□□ -0.06
PDLIM2-216ENST00000464275 IGKV2D-28P01615 120 aa14.69□□□□□ -0.06
PDLIM2-216ENST00000464275 LINC00337Q8N6G1 96 aa14.69□□□□□ -0.06
PDLIM2-216ENST00000464275 NOTCH1P46531 2555 aa14.68□□□□□ -0.06
PDLIM2-216ENST00000464275 CCL18P55774 89 aa14.68□□□□□ -0.06
PDLIM2-216ENST00000464275 ANAPC13Q9BS18 74 aa14.68□□□□□ -0.06
PDLIM2-216ENST00000464275 BAALC-AS2P0C853 105 aa14.67□□□□□ -0.06
PDLIM2-216ENST00000464275 INAFM2P0DMQ5 153 aa14.67□□□□□ -0.06
PDLIM2-216ENST00000464275 COX17Q14061 63 aa14.65□□□□□ -0.06
PDLIM2-216ENST00000464275 SPAG11BQ08648 103 aa14.64□□□□□ -0.07
PDLIM2-216ENST00000464275 TTC32Q5I0X7 151 aa14.64□□□□□ -0.07
PDLIM2-216ENST00000464275 LINC01556Q5JQF7 62 aa14.64□□□□□ -0.07
PDLIM2-216ENST00000464275 FAM218AQ96MZ4 157 aa14.64□□□□□ -0.07
PDLIM2-216ENST00000464275 TRBV7-7A0A0K0K1E9 115 aa14.62□□□□□ -0.07
PDLIM2-216ENST00000464275 DNAL4O96015 105 aa14.62□□□□□ -0.07
PDLIM2-216ENST00000464275 NDUFV3P56181 108 aaKnown RBP14.62□□□□□ -0.07
PDLIM2-216ENST00000464275 SMIM11BQ8TCY0 68 aa14.62□□□□□ -0.07
PDLIM2-216ENST00000464275 IMUPQ9GZP8 106 aa14.61□□□□□ -0.07
PDLIM2-216ENST00000464275 HUWE1Q7Z6Z7 4374 aaKnown RBP14.59□□□□□ -0.07
PDLIM2-216ENST00000464275 KRTAP26-1Q6PEX3 210 aa14.58□□□□□ -0.07
PDLIM2-216ENST00000464275 NBEAL1Q6ZS30 2694 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms