RNA–Protein interactions for RNA: ENST00000463965.1

SURF1-203, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 3

Gene SURF1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-203ENST00000463965 H3BRM9 83 aa16.57■□□□□ 0.24
SURF1-203ENST00000463965 SRRM2Q9UQ35 2752 aaKnown RBP16.56■□□□□ 0.24
SURF1-203ENST00000463965 SCO1O75880 301 aa16.56■□□□□ 0.24
SURF1-203ENST00000463965 C2orf82Q6UX34 121 aa16.56■□□□□ 0.24
SURF1-203ENST00000463965 C6orf48Q9UBA6 75 aa16.56■□□□□ 0.24
SURF1-203ENST00000463965 RPL37AP61513 92 aaKnown RBP16.55■□□□□ 0.24
SURF1-203ENST00000463965 IGLC3P0DOY3 106 aa16.54■□□□□ 0.24
SURF1-203ENST00000463965 C7orf33Q8WU49 177 aa16.54■□□□□ 0.24
SURF1-203ENST00000463965 SMIM1B2RUZ4 78 aa16.53■□□□□ 0.24
SURF1-203ENST00000463965 TLX1NBP0CAT3 122 aa16.53■□□□□ 0.24
SURF1-203ENST00000463965 IFI27L1Q96BM0 104 aa16.53■□□□□ 0.24
SURF1-203ENST00000463965 CXCL5P42830 114 aa16.52■□□□□ 0.24
SURF1-203ENST00000463965 SPINK8P0C7L1 97 aa16.51■□□□□ 0.23
SURF1-203ENST00000463965 FAM19A2Q8N3H0 131 aa16.51■□□□□ 0.23
SURF1-203ENST00000463965 SERF1AO75920 110 aa16.5■□□□□ 0.23
SURF1-203ENST00000463965 COX7B2Q8TF08 81 aa16.5■□□□□ 0.23
SURF1-203ENST00000463965 CHTOPQ9Y3Y2 248 aaKnown RBP16.49■□□□□ 0.23
SURF1-203ENST00000463965 F8VRH5 84 aa16.48■□□□□ 0.23
SURF1-203ENST00000463965 TRAV12-1A0A0B4J245 112 aa16.47■□□□□ 0.23
SURF1-203ENST00000463965 NDUFC2-KCTD14E9PQ53 114 aa16.47■□□□□ 0.23
SURF1-203ENST00000463965 Q6ZRP5 223 aa16.47■□□□□ 0.23
SURF1-203ENST00000463965 ZNF22P17026 224 aaPredicted RBP16.46■□□□□ 0.23
SURF1-203ENST00000463965 GAGE2EQ4V326 116 aa16.46■□□□□ 0.23
SURF1-203ENST00000463965 GAGE2DQ9UEU5 116 aa16.46■□□□□ 0.23
SURF1-203ENST00000463965 LEPROTL1O95214 131 aa16.45■□□□□ 0.22
SURF1-203ENST00000463965 C9orf116Q5BN46 136 aaPredicted RBP16.45■□□□□ 0.22
SURF1-203ENST00000463965 TMEM170BQ5T4T1 132 aa16.44■□□□□ 0.22
SURF1-203ENST00000463965 A0A1W2PNN7 141 aa16.43■□□□□ 0.22
SURF1-203ENST00000463965 C11orf86A6NJI1 115 aa16.43■□□□□ 0.22
SURF1-203ENST00000463965 LINC00310P59036 64 aa16.43■□□□□ 0.22
SURF1-203ENST00000463965 KRTAP10-4P60372 401 aaPredicted RBP16.43■□□□□ 0.22
SURF1-203ENST00000463965 HSPB8Q9UJY1 196 aa16.43■□□□□ 0.22
SURF1-203ENST00000463965 FLG2Q5D862 2391 aaPredicted RBP16.41■□□□□ 0.22
SURF1-203ENST00000463965 IGLV5-39A0A0G2JS06 123 aa16.4■□□□□ 0.22
SURF1-203ENST00000463965 NUPR1O60356 82 aa16.38■□□□□ 0.21
SURF1-203ENST00000463965 HIST1H2BKO60814 126 aa16.38■□□□□ 0.21
SURF1-203ENST00000463965 HIST1H2BJP06899 126 aa16.38■□□□□ 0.21
SURF1-203ENST00000463965 S100A1P23297 94 aa16.38■□□□□ 0.21
SURF1-203ENST00000463965 HIST1H2BOP23527 126 aa16.38■□□□□ 0.21
SURF1-203ENST00000463965 HIST1H2BBP33778 126 aa16.38■□□□□ 0.21
SURF1-203ENST00000463965 HIST1H2BDP58876 126 aa16.38■□□□□ 0.21
SURF1-203ENST00000463965 HIST1H2BCP62807 126 aa16.38■□□□□ 0.21
SURF1-203ENST00000463965 HIST2H2BEQ16778 126 aa16.38■□□□□ 0.21
SURF1-203ENST00000463965 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.38■□□□□ 0.21
SURF1-203ENST00000463965 HIST1H2BHQ93079 126 aa16.38■□□□□ 0.21
SURF1-203ENST00000463965 HIST1H2BNQ99877 126 aa16.38■□□□□ 0.21
SURF1-203ENST00000463965 HIST1H2BMQ99879 126 aa16.38■□□□□ 0.21
SURF1-203ENST00000463965 H0Y8G0 127 aa16.37■□□□□ 0.21
SURF1-203ENST00000463965 FABP4P15090 132 aa16.36■□□□□ 0.21
SURF1-203ENST00000463965 SFTA2Q6UW10 78 aa16.33■□□□□ 0.2
SURF1-203ENST00000463965 FAM19A5Q7Z5A7 132 aaPredicted RBP16.33■□□□□ 0.2
SURF1-203ENST00000463965 FAM168BA1KXE4 195 aa16.32■□□□□ 0.2
SURF1-203ENST00000463965 PRR3P79522 188 aaKnown RBP16.32■□□□□ 0.2
SURF1-203ENST00000463965 ODF1Q14990 250 aa16.32■□□□□ 0.2
SURF1-203ENST00000463965 TMEM223A0PJW6 202 aa16.31■□□□□ 0.2
SURF1-203ENST00000463965 C9orf129Q5T035 196 aaKnown RBP16.31■□□□□ 0.2
SURF1-203ENST00000463965 PHF5AQ7RTV0 110 aaKnown RBP16.31■□□□□ 0.2
SURF1-203ENST00000463965 MAP1LC3CQ9BXW4 147 aa16.3■□□□□ 0.2
SURF1-203ENST00000463965 XAGE1AQ9HD64 81 aa16.29■□□□□ 0.2
SURF1-203ENST00000463965 PLNP26678 52 aa16.28■□□□□ 0.2
SURF1-203ENST00000463965 ATP6V1G1O75348 118 aa16.27■□□□□ 0.2
SURF1-203ENST00000463965 M0QXV9 152 aa16.26■□□□□ 0.19
SURF1-203ENST00000463965 HNRNPA3P51991 378 aaKnown RBP16.26■□□□□ 0.19
SURF1-203ENST00000463965 DPM2O94777 84 aa16.24■□□□□ 0.19
SURF1-203ENST00000463965 PFN2P35080 140 aa16.24■□□□□ 0.19
SURF1-203ENST00000463965 COX17Q14061 63 aa16.23■□□□□ 0.19
SURF1-203ENST00000463965 ERG28Q9UKR5 140 aa16.23■□□□□ 0.19
SURF1-203ENST00000463965 MYCBP2O75592 4640 aa16.23■□□□□ 0.19
SURF1-203ENST00000463965 J3QL48 77 aa16.22■□□□□ 0.19
SURF1-203ENST00000463965 UBE2BP63146 152 aa16.22■□□□□ 0.19
SURF1-203ENST00000463965 ZNF625Q96I27 306 aaPredicted RBP16.22■□□□□ 0.19
SURF1-203ENST00000463965 PSORS1C2Q9UIG4 136 aa16.22■□□□□ 0.19
SURF1-203ENST00000463965 KRTAP29-1A8MX34 341 aaPredicted RBP16.21■□□□□ 0.19
SURF1-203ENST00000463965 KRTAP7-1Q8IUC3 87 aa16.21■□□□□ 0.19
SURF1-203ENST00000463965 DMBT1Q9UGM3 2413 aaPredicted RBP16.2■□□□□ 0.18
SURF1-203ENST00000463965 IGKCP01834 107 aa16.2■□□□□ 0.18
SURF1-203ENST00000463965 HERVK_113P61574 105 aa16.2■□□□□ 0.18
SURF1-203ENST00000463965 LBHQ53QV2 105 aaPredicted RBP16.2■□□□□ 0.18
SURF1-203ENST00000463965 SERTAD4-AS1Q5TG53 156 aa16.2■□□□□ 0.18
SURF1-203ENST00000463965 OXTP01178 125 aa16.19■□□□□ 0.18
SURF1-203ENST00000463965 COA6Q5JTJ3 125 aaKnown RBP16.19■□□□□ 0.18
SURF1-203ENST00000463965 C22orf24Q9Y442 160 aa16.19■□□□□ 0.18
SURF1-203ENST00000463965 C1orf137Q5JT78 98 aa16.18■□□□□ 0.18
SURF1-203ENST00000463965 PMCHL2Q9BQD1 86 aa16.18■□□□□ 0.18
SURF1-203ENST00000463965 PLA2G2DQ9UNK4 145 aa16.17■□□□□ 0.18
SURF1-203ENST00000463965 PKHD1L1Q86WI1 4243 aa16.17■□□□□ 0.18
SURF1-203ENST00000463965 SYS1-DBNDD2H3BUS1 97 aa16.16■□□□□ 0.18
SURF1-203ENST00000463965 PLEKHB2Q96CS7 222 aa16.16■□□□□ 0.18
SURF1-203ENST00000463965 TP73-AS1Q9UF72 201 aa16.16■□□□□ 0.18
SURF1-203ENST00000463965 HERV-K104P63124 156 aa16.15■□□□□ 0.18
SURF1-203ENST00000463965 SPINK6Q6UWN8 80 aa16.15■□□□□ 0.18
SURF1-203ENST00000463965 LEPROTO15243 131 aa16.14■□□□□ 0.17
SURF1-203ENST00000463965 LINC00158P58513 81 aa16.14■□□□□ 0.17
SURF1-203ENST00000463965 NDUFA12Q9UI09 145 aa16.14■□□□□ 0.17
SURF1-203ENST00000463965 MYMXA0A1B0GTQ4 84 aa16.13■□□□□ 0.17
SURF1-203ENST00000463965 LINC00587B1AMM8 73 aa16.13■□□□□ 0.17
SURF1-203ENST00000463965 MRPL55Q7Z7F7 128 aaKnown RBP16.13■□□□□ 0.17
SURF1-203ENST00000463965 SND1-IT1Q9HBX3 110 aa16.13■□□□□ 0.17
SURF1-203ENST00000463965 MEIG1Q5JSS6 88 aa16.12■□□□□ 0.17
SURF1-203ENST00000463965 PET117Q6UWS5 81 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms