RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 ABCA13Q86UQ4 5058 aa5.68□□□□□ -1.5
DDX39B-216ENST00000462421 HBDP02042 147 aa5.68□□□□□ -1.5
DDX39B-216ENST00000462421 UBE2BP63146 152 aa5.68□□□□□ -1.5
DDX39B-216ENST00000462421 PMVKQ15126 192 aa5.68□□□□□ -1.5
DDX39B-216ENST00000462421 C10orf91Q5T1B1 145 aa5.68□□□□□ -1.5
DDX39B-216ENST00000462421 A0A0J9YXV3 536 aa5.67□□□□□ -1.5
DDX39B-216ENST00000462421 IGIPA6NJ69 53 aa5.67□□□□□ -1.5
DDX39B-216ENST00000462421 KRTAP29-1A8MX34 341 aaPredicted RBP5.67□□□□□ -1.5
DDX39B-216ENST00000462421 PANO1I0J062 215 aa5.67□□□□□ -1.5
DDX39B-216ENST00000462421 ATP5LO75964 103 aa5.67□□□□□ -1.5
DDX39B-216ENST00000462421 LINC00614P0C842 121 aa5.67□□□□□ -1.5
DDX39B-216ENST00000462421 AMELXQ99217 191 aa5.67□□□□□ -1.5
DDX39B-216ENST00000462421 TINCRA0A1B0GVN0 87 aa5.66□□□□□ -1.5
DDX39B-216ENST00000462421 NDUFC2-KCTD14E9PQ53 114 aa5.66□□□□□ -1.5
DDX39B-216ENST00000462421 PRR3P79522 188 aaKnown RBP5.66□□□□□ -1.5
DDX39B-216ENST00000462421 C9orf116Q5BN46 136 aaPredicted RBP5.66□□□□□ -1.5
DDX39B-216ENST00000462421 UNQ6190/PRO20217Q6UXQ8 127 aa5.66□□□□□ -1.5
DDX39B-216ENST00000462421 Q8IZM0 81 aa5.66□□□□□ -1.5
DDX39B-216ENST00000462421 F8VRH5 84 aa5.65□□□□□ -1.5
DDX39B-216ENST00000462421 TLX1NBP0CAT3 122 aa5.65□□□□□ -1.5
DDX39B-216ENST00000462421 PDZD11Q5EBL8 140 aa5.65□□□□□ -1.5
DDX39B-216ENST00000462421 FAM19A5Q7Z5A7 132 aaPredicted RBP5.65□□□□□ -1.5
DDX39B-216ENST00000462421 BAGE3Q86Y29 109 aa5.65□□□□□ -1.5
DDX39B-216ENST00000462421 FAT1Q14517 4588 aa5.64□□□□□ -1.51
DDX39B-216ENST00000462421 LBHQ53QV2 105 aaPredicted RBP5.64□□□□□ -1.51
DDX39B-216ENST00000462421 SERTAD4-AS1Q5TG53 156 aa5.64□□□□□ -1.51
DDX39B-216ENST00000462421 SFTA2Q6UW10 78 aa5.64□□□□□ -1.51
DDX39B-216ENST00000462421 COX7B2Q8TF08 81 aa5.64□□□□□ -1.51
DDX39B-216ENST00000462421 CST9LQ9H4G1 147 aa5.64□□□□□ -1.51
DDX39B-216ENST00000462421 C6orf48Q9UBA6 75 aa5.64□□□□□ -1.51
DDX39B-216ENST00000462421 CDKN2A-AS1Q9UH64 79 aa5.64□□□□□ -1.51
DDX39B-216ENST00000462421 M0QXV9 152 aa5.63□□□□□ -1.51
DDX39B-216ENST00000462421 ATP6V1G1O75348 118 aa5.63□□□□□ -1.51
DDX39B-216ENST00000462421 HSBP1O75506 76 aa5.63□□□□□ -1.51
DDX39B-216ENST00000462421 C1orf137Q5JT78 98 aa5.63□□□□□ -1.51
DDX39B-216ENST00000462421 ZC2HC1BQ5TFG8 222 aa5.63□□□□□ -1.51
DDX39B-216ENST00000462421 SPINK6Q6UWN8 80 aa5.63□□□□□ -1.51
DDX39B-216ENST00000462421 C2orf82Q6UX34 121 aa5.63□□□□□ -1.51
DDX39B-216ENST00000462421 FAM19A3Q7Z5A8 133 aa5.63□□□□□ -1.51
DDX39B-216ENST00000462421 CHCHD1Q96BP2 118 aaKnown RBP5.63□□□□□ -1.51
DDX39B-216ENST00000462421 DNAH8Q96JB1 4490 aa5.63□□□□□ -1.51
DDX39B-216ENST00000462421 DMBT1Q9UGM3 2413 aaPredicted RBP5.62□□□□□ -1.51
DDX39B-216ENST00000462421 LINC01546A6NGU7 62 aa5.62□□□□□ -1.51
DDX39B-216ENST00000462421 TMEM170BQ5T4T1 132 aa5.62□□□□□ -1.51
DDX39B-216ENST00000462421 LINC00173Q6ZV60 143 aa5.62□□□□□ -1.51
DDX39B-216ENST00000462421 NKAPP1Q8N9T2 125 aa5.62□□□□□ -1.51
DDX39B-216ENST00000462421 C18orf32Q8TCD1 76 aa5.62□□□□□ -1.51
DDX39B-216ENST00000462421 SRRM2Q9UQ35 2752 aaKnown RBP5.61□□□□□ -1.51
DDX39B-216ENST00000462421 SPINK8P0C7L1 97 aa5.61□□□□□ -1.51
DDX39B-216ENST00000462421 C10orf25Q5T742 122 aa5.61□□□□□ -1.51
DDX39B-216ENST00000462421 FAM104AQ969W3 186 aa5.61□□□□□ -1.51
DDX39B-216ENST00000462421 A0A1W2PNN7 141 aa5.6□□□□□ -1.51
DDX39B-216ENST00000462421 SMIM1B2RUZ4 78 aa5.6□□□□□ -1.51
DDX39B-216ENST00000462421 PMCHL1Q16048 86 aa5.6□□□□□ -1.51
DDX39B-216ENST00000462421 PHF5AQ7RTV0 110 aaKnown RBP5.6□□□□□ -1.51
DDX39B-216ENST00000462421 DIRC1Q969H9 104 aa5.6□□□□□ -1.51
DDX39B-216ENST00000462421 CHTOPQ9Y3Y2 248 aaKnown RBP5.6□□□□□ -1.51
DDX39B-216ENST00000462421 UBR4Q5T4S7 5183 aa5.6□□□□□ -1.51
DDX39B-216ENST00000462421 IGLC3P0DOY3 106 aa5.59□□□□□ -1.51
DDX39B-216ENST00000462421 KIAA0087Q14695 138 aa5.59□□□□□ -1.51
DDX39B-216ENST00000462421 VPS13BQ7Z7G8 4022 aa5.58□□□□□ -1.52
DDX39B-216ENST00000462421 LINC00587B1AMM8 73 aa5.58□□□□□ -1.52
DDX39B-216ENST00000462421 H0Y8G0 127 aa5.58□□□□□ -1.52
DDX39B-216ENST00000462421 NUPR1O60356 82 aa5.58□□□□□ -1.52
DDX39B-216ENST00000462421 HERVK_113P61574 105 aa5.58□□□□□ -1.52
DDX39B-216ENST00000462421 S100A12P80511 92 aa5.58□□□□□ -1.52
DDX39B-216ENST00000462421 CBLN2Q8IUK8 224 aa5.58□□□□□ -1.52
DDX39B-216ENST00000462421 IFI27L1Q96BM0 104 aa5.58□□□□□ -1.52
DDX39B-216ENST00000462421 XAGE1AQ9HD64 81 aa5.58□□□□□ -1.52
DDX39B-216ENST00000462421 PSORS1C2Q9UIG4 136 aa5.58□□□□□ -1.52
DDX39B-216ENST00000462421 HSPB8Q9UJY1 196 aa5.58□□□□□ -1.52
DDX39B-216ENST00000462421 PLA2G2DQ9UNK4 145 aa5.58□□□□□ -1.52
DDX39B-216ENST00000462421 IGLV5-45A0A087WSX0 123 aa5.57□□□□□ -1.52
DDX39B-216ENST00000462421 PFN2P35080 140 aa5.57□□□□□ -1.52
DDX39B-216ENST00000462421 KRTAP10-4P60372 401 aaPredicted RBP5.57□□□□□ -1.52
DDX39B-216ENST00000462421 RPL24P83731 157 aaKnown RBP5.57□□□□□ -1.52
DDX39B-216ENST00000462421 KRTAP4-11Q9BYQ6 195 aa5.57□□□□□ -1.52
DDX39B-216ENST00000462421 FLG2Q5D862 2391 aaPredicted RBP5.57□□□□□ -1.52
DDX39B-216ENST00000462421 FAM168BA1KXE4 195 aa5.56□□□□□ -1.52
DDX39B-216ENST00000462421 LEPROTL1O95214 131 aa5.56□□□□□ -1.52
DDX39B-216ENST00000462421 HNRNPA3P51991 378 aaKnown RBP5.56□□□□□ -1.52
DDX39B-216ENST00000462421 COX17Q14061 63 aa5.56□□□□□ -1.52
DDX39B-216ENST00000462421 MEIG1Q5JSS6 88 aa5.56□□□□□ -1.52
DDX39B-216ENST00000462421 MRPL55Q7Z7F7 128 aaKnown RBP5.56□□□□□ -1.52
DDX39B-216ENST00000462421 MAP1LC3CQ9BXW4 147 aa5.56□□□□□ -1.52
DDX39B-216ENST00000462421 TRAV12-1A0A0B4J245 112 aa5.55□□□□□ -1.52
DDX39B-216ENST00000462421 TRGC2P03986 189 aa5.55□□□□□ -1.52
DDX39B-216ENST00000462421 IGLV7-43P04211 117 aa5.55□□□□□ -1.52
DDX39B-216ENST00000462421 ZNF22P17026 224 aaPredicted RBP5.55□□□□□ -1.52
DDX39B-216ENST00000462421 PLNP26678 52 aa5.55□□□□□ -1.52
DDX39B-216ENST00000462421 RPL28P46779 137 aaKnown RBP5.55□□□□□ -1.52
DDX39B-216ENST00000462421 LINC00158P58513 81 aa5.55□□□□□ -1.52
DDX39B-216ENST00000462421 TP73-AS1Q9UF72 201 aa5.55□□□□□ -1.52
DDX39B-216ENST00000462421 C22orf24Q9Y442 160 aa5.55□□□□□ -1.52
DDX39B-216ENST00000462421 HERC1Q15751 4861 aa5.54□□□□□ -1.52
DDX39B-216ENST00000462421 UBE2AP49459 152 aa5.54□□□□□ -1.52
DDX39B-216ENST00000462421 C9orf129Q5T035 196 aaKnown RBP5.54□□□□□ -1.52
DDX39B-216ENST00000462421 LINC01600Q96MT4 127 aa5.54□□□□□ -1.52
DDX39B-216ENST00000462421 ERG28Q9UKR5 140 aa5.54□□□□□ -1.52
DDX39B-216ENST00000462421 C11orf86A6NJI1 115 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms