RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 UBR4Q5T4S7 5183 aa5.6□□□□□ -1.51
BRCA1-207ENST00000461798 MT-ND6P03923 174 aa5.6□□□□□ -1.51
BRCA1-207ENST00000461798 G0S2P27469 103 aa5.6□□□□□ -1.51
BRCA1-207ENST00000461798 UQCC3Q6UW78 93 aa5.6□□□□□ -1.51
BRCA1-207ENST00000461798 Q6ZN92 141 aa5.6□□□□□ -1.51
BRCA1-207ENST00000461798 KRTAP7-1Q8IUC3 87 aa5.6□□□□□ -1.51
BRCA1-207ENST00000461798 CTDSP1Q9GZU7 261 aa5.6□□□□□ -1.51
BRCA1-207ENST00000461798 TRAV9-1A0A075B6T8 112 aa5.59□□□□□ -1.51
BRCA1-207ENST00000461798 FAM168BA1KXE4 195 aa5.59□□□□□ -1.51
BRCA1-207ENST00000461798 TMEM218A2RU14 115 aa5.59□□□□□ -1.51
BRCA1-207ENST00000461798 NDUFC2-KCTD14E9PQ53 114 aa5.59□□□□□ -1.51
BRCA1-207ENST00000461798 IGLV7-43P04211 117 aa5.59□□□□□ -1.51
BRCA1-207ENST00000461798 ODF1Q14990 250 aa5.59□□□□□ -1.51
BRCA1-207ENST00000461798 C1orf137Q5JT78 98 aa5.59□□□□□ -1.51
BRCA1-207ENST00000461798 PAPPA-AS1Q5QFB9 102 aa5.59□□□□□ -1.51
BRCA1-207ENST00000461798 ZC2HC1BQ5TFG8 222 aa5.59□□□□□ -1.51
BRCA1-207ENST00000461798 ADCYAP1P18509 176 aa5.58□□□□□ -1.52
BRCA1-207ENST00000461798 SEC11AP67812 179 aa5.58□□□□□ -1.52
BRCA1-207ENST00000461798 GAGE2EQ4V326 116 aa5.58□□□□□ -1.52
BRCA1-207ENST00000461798 C2orf82Q6UX34 121 aa5.58□□□□□ -1.52
BRCA1-207ENST00000461798 KRTAP11-1Q8IUC1 163 aa5.58□□□□□ -1.52
BRCA1-207ENST00000461798 TOMM6Q96B49 74 aa5.58□□□□□ -1.52
BRCA1-207ENST00000461798 PACRGQ96M98 296 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-207ENST00000461798 TIMM17AQ99595 171 aa5.58□□□□□ -1.52
BRCA1-207ENST00000461798 GAGE2DQ9UEU5 116 aa5.58□□□□□ -1.52
BRCA1-207ENST00000461798 LINC01546A6NGU7 62 aa5.57□□□□□ -1.52
BRCA1-207ENST00000461798 HERVK_113P63121 156 aa5.57□□□□□ -1.52
BRCA1-207ENST00000461798 C9orf129Q5T035 196 aaKnown RBP5.57□□□□□ -1.52
BRCA1-207ENST00000461798 Q8IZM0 81 aa5.57□□□□□ -1.52
BRCA1-207ENST00000461798 DIRC1Q969H9 104 aa5.57□□□□□ -1.52
BRCA1-207ENST00000461798 LINC01549A6NIU2 74 aa5.56□□□□□ -1.52
BRCA1-207ENST00000461798 IFITM2Q01629 132 aa5.56□□□□□ -1.52
BRCA1-207ENST00000461798 C6orf226Q5I0X4 101 aa5.56□□□□□ -1.52
BRCA1-207ENST00000461798 ERASQ7Z444 233 aa5.56□□□□□ -1.52
BRCA1-207ENST00000461798 FAM19A5Q7Z5A7 132 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-207ENST00000461798 SEC11CQ9BY50 192 aa5.56□□□□□ -1.52
BRCA1-207ENST00000461798 GNB1LQ9BYB4 327 aa5.56□□□□□ -1.52
BRCA1-207ENST00000461798 CDKN2A-AS1Q9UH64 79 aa5.56□□□□□ -1.52
BRCA1-207ENST00000461798 H0Y9J4 135 aa5.55□□□□□ -1.52
BRCA1-207ENST00000461798 M0QXV9 152 aa5.55□□□□□ -1.52
BRCA1-207ENST00000461798 PRSS2P07478 247 aa5.55□□□□□ -1.52
BRCA1-207ENST00000461798 CKS1BP61024 79 aa5.55□□□□□ -1.52
BRCA1-207ENST00000461798 KIAA1644Q3SXP7 199 aa5.55□□□□□ -1.52
BRCA1-207ENST00000461798 ALKBH7Q9BT30 221 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-207ENST00000461798 IGLV5-45A0A087WSX0 123 aa5.54□□□□□ -1.52
BRCA1-207ENST00000461798 COX19Q49B96 90 aa5.54□□□□□ -1.52
BRCA1-207ENST00000461798 SCGB3A1Q96QR1 104 aa5.54□□□□□ -1.52
BRCA1-207ENST00000461798 GEMIN7Q9H840 131 aaKnown RBP5.54□□□□□ -1.52
BRCA1-207ENST00000461798 TOMM7Q9P0U1 55 aa5.54□□□□□ -1.52
BRCA1-207ENST00000461798 LRP2P98164 4655 aa5.53□□□□□ -1.52
BRCA1-207ENST00000461798 TINCRA0A1B0GVN0 87 aa5.53□□□□□ -1.52
BRCA1-207ENST00000461798 F8VRH5 84 aa5.53□□□□□ -1.52
BRCA1-207ENST00000461798 S100PP25815 95 aa5.53□□□□□ -1.52
BRCA1-207ENST00000461798 CXCL5P42830 114 aa5.53□□□□□ -1.52
BRCA1-207ENST00000461798 UBE2BP63146 152 aa5.53□□□□□ -1.52
BRCA1-207ENST00000461798 PDZD11Q5EBL8 140 aa5.53□□□□□ -1.52
BRCA1-207ENST00000461798 C10orf91Q5T1B1 145 aa5.53□□□□□ -1.52
BRCA1-207ENST00000461798 IGLV1-50A0A075B6I6 118 aa5.52□□□□□ -1.53
BRCA1-207ENST00000461798 SMIM1B2RUZ4 78 aa5.52□□□□□ -1.53
BRCA1-207ENST00000461798 KRTAP1-4P0C5Y4 121 aa5.52□□□□□ -1.53
BRCA1-207ENST00000461798 LBHQ53QV2 105 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-207ENST00000461798 PRR26Q8N8Z3 221 aa5.52□□□□□ -1.53
BRCA1-207ENST00000461798 CST9LQ9H4G1 147 aa5.52□□□□□ -1.53
BRCA1-207ENST00000461798 TP73-AS1Q9UF72 201 aa5.52□□□□□ -1.53
BRCA1-207ENST00000461798 C22orf24Q9Y442 160 aa5.52□□□□□ -1.53
BRCA1-207ENST00000461798 LINC00469Q8N7U9 141 aa5.51□□□□□ -1.53
BRCA1-207ENST00000461798 XAGE1AQ9HD64 81 aa5.51□□□□□ -1.53
BRCA1-207ENST00000461798 NUPR1O60356 82 aa5.5□□□□□ -1.53
BRCA1-207ENST00000461798 ZNF861PO60384 105 aa5.5□□□□□ -1.53
BRCA1-207ENST00000461798 PMVKQ15126 192 aa5.5□□□□□ -1.53
BRCA1-207ENST00000461798 RHEBQ15382 184 aa5.5□□□□□ -1.53
BRCA1-207ENST00000461798 COX7B2Q8TF08 81 aa5.5□□□□□ -1.53
BRCA1-207ENST00000461798 CARHSP1Q9Y2V2 147 aaKnown RBP5.5□□□□□ -1.53
BRCA1-207ENST00000461798 FABP9Q0Z7S8 132 aa5.49□□□□□ -1.53
BRCA1-207ENST00000461798 FA2HQ7L5A8 372 aa5.49□□□□□ -1.53
BRCA1-207ENST00000461798 COMMD7Q86VX2 200 aa5.49□□□□□ -1.53
BRCA1-207ENST00000461798 IGLV5-37A0A075B6J1 123 aa5.48□□□□□ -1.53
BRCA1-207ENST00000461798 MRPL55Q7Z7F7 128 aaKnown RBP5.48□□□□□ -1.53
BRCA1-207ENST00000461798 SMCO4Q9NRQ5 59 aa5.48□□□□□ -1.53
BRCA1-207ENST00000461798 A0A096LNJ9 63 aa5.47□□□□□ -1.53
BRCA1-207ENST00000461798 IGLV5-39A0A0G2JS06 123 aa5.47□□□□□ -1.53
BRCA1-207ENST00000461798 H3BRM9 83 aa5.47□□□□□ -1.53
BRCA1-207ENST00000461798 SPINK8P0C7L1 97 aa5.47□□□□□ -1.53
BRCA1-207ENST00000461798 IGLC3P0DOY3 106 aa5.47□□□□□ -1.53
BRCA1-207ENST00000461798 RPL13AP40429 203 aaKnown RBP5.47□□□□□ -1.53
BRCA1-207ENST00000461798 URB1-AS1Q96HZ7 61 aa5.47□□□□□ -1.53
BRCA1-207ENST00000461798 RPS10P5Q9NQ39 176 aa5.47□□□□□ -1.53
BRCA1-207ENST00000461798 BCE1O60756 84 aa5.46□□□□□ -1.54
BRCA1-207ENST00000461798 LINC00614P0C842 121 aa5.46□□□□□ -1.54
BRCA1-207ENST00000461798 C18orf32Q8TCD1 76 aa5.46□□□□□ -1.54
BRCA1-207ENST00000461798 LINC00167Q96N53 147 aa5.46□□□□□ -1.54
BRCA1-207ENST00000461798 RPL28P46779 137 aaKnown RBP5.45□□□□□ -1.54
BRCA1-207ENST00000461798 TRAPPC1Q9Y5R8 145 aa5.45□□□□□ -1.54
BRCA1-207ENST00000461798 ATP5LO75964 103 aa5.44□□□□□ -1.54
BRCA1-207ENST00000461798 HBDP02042 147 aa5.44□□□□□ -1.54
BRCA1-207ENST00000461798 RAB5BP61020 215 aa5.44□□□□□ -1.54
BRCA1-207ENST00000461798 ZNF22P17026 224 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-207ENST00000461798 COX17Q14061 63 aa5.43□□□□□ -1.54
BRCA1-207ENST00000461798 KRTAP13-1Q8IUC0 172 aa5.43□□□□□ -1.54
BRCA1-207ENST00000461798 RNF213Q63HN8 5207 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms