RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 MRPL30Q8TCC3 161 aaKnown RBP0.95□□□□□ -2.26
RFC4-211ENST00000460408 PP6455Q8WZ26 134 aa0.95□□□□□ -2.26
RFC4-211ENST00000460408 PRADC1Q9BSG0 188 aa0.95□□□□□ -2.26
RFC4-211ENST00000460408 PSMG3Q9BT73 122 aaPredicted RBP0.95□□□□□ -2.26
RFC4-211ENST00000460408 DERL1Q9BUN8 251 aa0.95□□□□□ -2.26
RFC4-211ENST00000460408 TMEM147Q9BVK8 224 aa0.95□□□□□ -2.26
RFC4-211ENST00000460408 TTTY10Q9BZA0 68 aa0.95□□□□□ -2.26
RFC4-211ENST00000460408 OTORQ9NRC9 128 aa0.95□□□□□ -2.26
RFC4-211ENST00000460408 TP73-AS1Q9UF72 201 aa0.95□□□□□ -2.26
RFC4-211ENST00000460408 CYSLTR1Q9Y271 337 aa0.95□□□□□ -2.26
RFC4-211ENST00000460408 LY96Q9Y6Y9 160 aa0.95□□□□□ -2.26
RFC4-211ENST00000460408 V9GYS6 101 aa0.95□□□□□ -2.26
RFC4-211ENST00000460408 TRAV1-1A0A0B4J248 108 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 IGKV1-9A0A0C4DH69 117 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 FAM236AA0A1B0GUQ0 79 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 FAM236BA0A1B0GV22 79 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 TRDV1A0A1B0GX56 115 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 TMEM30CPA0ZSE6 113 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 FAM223BA6NKX1 122 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 C1orf196B1AJZ1 125 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 ZNF670-ZNF695F2Z2N8 137 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 M0R2Z0 102 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 FXYD1O00168 92 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 IGKV1-5P01602 117 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 APOA2P02652 100 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 PMP2P02689 132 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 CTSDP07339 412 aaPredicted RBP0.94□□□□□ -2.26
RFC4-211ENST00000460408 IGLC1P0CG04 106 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 TRAPPC2P0DI81 140 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 TRAPPC2BP0DI82 140 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 SAA2P0DJI9 122 aaPredicted RBP0.94□□□□□ -2.26
RFC4-211ENST00000460408 APELAP0DMC3 54 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 GNG4P50150 75 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 RAB5CP51148 216 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 FOXA3P55318 350 aaPredicted RBP0.94□□□□□ -2.26
RFC4-211ENST00000460408 S100A10P60903 97 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 ZNF345Q14585 488 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 FXYD3Q14802 87 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 BCL2L15Q5TBC7 163 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 AADACL3Q5VUY0 350 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 TMEM244Q5VVB8 128 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 FOXI2Q6ZQN5 318 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 ZNF833PQ6ZTB9 187 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 FAM223AQ8IWN6 122 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 TCTE3Q8IZS6 198 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 NUP35Q8NFH5 326 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 OR51A4Q8NGJ6 313 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 OTOSQ8NHW6 89 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 BORCS8Q96FH0 119 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 DPH3Q96FX2 82 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 PBDC1Q9BVG4 233 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 SPANXCQ9NY87 97 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 CCDC167Q9P0B6 97 aa0.94□□□□□ -2.26
RFC4-211ENST00000460408 TRBV19A0A075B6N1 114 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 LOC107986453A0A1B0GWG9 222 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 C7orf71A4D174 169 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 RIIAD1A6NNX1 92 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 ZNF727A8MUV8 499 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 GABARAPH6UMI1 98 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 J3QRK9 145 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 EDF1O60869 148 aaKnown RBP0.93□□□□□ -2.26
RFC4-211ENST00000460408 NDUFC2O95298 119 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 IFNA7P01567 189 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 CD2P06729 351 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 AKAIN1P0CW23 69 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 DEFB130BP0DP73 79 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 DEFB130AP0DP74 79 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 BCL2P10415 239 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 IL7P13232 177 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 HIST1H2BOP23527 126 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 HIST1H2BBP33778 126 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 ETV6P41212 452 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 UBE2D1P51668 147 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 HIST1H2BDP58876 126 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 HIST1H2BCP62807 126 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 MT1HP80294 61 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 CATR1Q13166 79 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 RHEBQ15382 184 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 HIST2H2BEQ16778 126 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 ESRGQ1W209 222 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 RRN3P1Q2M238 152 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 PIGYQ3MUY2 71 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 RPL39P5Q59GN2 51 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 MEIG1Q5JSS6 88 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.93□□□□□ -2.26
RFC4-211ENST00000460408 C10orf55Q5SWW7 151 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 Q6Q795 121 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 PRR15Q8IV56 129 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 ANKRD29Q8N6D5 301 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 OR10AC1Q8NH08 325 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 HIST1H2BHQ93079 126 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 HIST1H2BNQ99877 126 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 HIST1H2BMQ99879 126 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 SAR1AQ9NR31 198 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 COMMD3Q9UBI1 195 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 R4GMQ9 66 aa0.93□□□□□ -2.26
RFC4-211ENST00000460408 MDN1Q9NU22 5596 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 IGKV3-7A0A075B6H7 116 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 IGKV3D-7A0A0C4DH55 119 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 IGKV3OR2-268A0A0C4DH90 116 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms