RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 A0A087WVE0 104 aa11.47□□□□□ -0.57
HDAC7-217ENST00000459625 CCDC179H3BU77 68 aa11.47□□□□□ -0.57
HDAC7-217ENST00000459625 ATP5EP56381 51 aaPredicted RBP11.47□□□□□ -0.57
HDAC7-217ENST00000459625 DOPEY1Q5JWR5 2465 aa11.47□□□□□ -0.57
HDAC7-217ENST00000459625 KIAA1549LQ6ZVL6 1849 aa11.47□□□□□ -0.57
HDAC7-217ENST00000459625 LYPD5Q6UWN5 251 aa11.47□□□□□ -0.57
HDAC7-217ENST00000459625 ATG2AQ2TAZ0 1938 aa11.46□□□□□ -0.57
HDAC7-217ENST00000459625 IGLV1-51P01701 117 aa11.46□□□□□ -0.57
HDAC7-217ENST00000459625 LINC00242Q5T6M2 205 aa11.46□□□□□ -0.57
HDAC7-217ENST00000459625 PMAIP1Q13794 54 aa11.46□□□□□ -0.58
HDAC7-217ENST00000459625 ZNF295-AS1Q8N0V1 137 aa11.45□□□□□ -0.58
HDAC7-217ENST00000459625 CHTF8P0CG12 524 aa11.45□□□□□ -0.58
HDAC7-217ENST00000459625 EIF4EBP1Q13541 118 aaPredicted RBP11.44□□□□□ -0.58
HDAC7-217ENST00000459625 Q6ZRU5 148 aa11.44□□□□□ -0.58
HDAC7-217ENST00000459625 FSTL3O95633 263 aa11.43□□□□□ -0.58
HDAC7-217ENST00000459625 MOBPQ13875 183 aa11.43□□□□□ -0.58
HDAC7-217ENST00000459625 ABCA2Q9BZC7 2435 aa11.43□□□□□ -0.58
HDAC7-217ENST00000459625 C16orf90A8MZG2 172 aa11.43□□□□□ -0.58
HDAC7-217ENST00000459625 PCNX3Q9H6A9 2034 aa11.43□□□□□ -0.58
HDAC7-217ENST00000459625 SMCR5Q8TEV8 140 aa11.42□□□□□ -0.58
HDAC7-217ENST00000459625 COL4A4P53420 1690 aaPredicted RBP11.42□□□□□ -0.58
HDAC7-217ENST00000459625 C1orf195Q5TG92 126 aa11.42□□□□□ -0.58
HDAC7-217ENST00000459625 POLR2KP53803 58 aaKnown RBP11.42□□□□□ -0.58
HDAC7-217ENST00000459625 FHL3Q13643 280 aa11.42□□□□□ -0.58
HDAC7-217ENST00000459625 hDV103S1A0JD37 113 aa11.41□□□□□ -0.58
HDAC7-217ENST00000459625 HCFC1P51610 2035 aa11.41□□□□□ -0.58
HDAC7-217ENST00000459625 Q6JHZ5 121 aa11.41□□□□□ -0.58
HDAC7-217ENST00000459625 Q6ZSN1 163 aa11.41□□□□□ -0.58
HDAC7-217ENST00000459625 SMIM1B2RUZ4 78 aa11.4□□□□□ -0.58
HDAC7-217ENST00000459625 CHCHD7Q9BUK0 85 aa11.4□□□□□ -0.58
HDAC7-217ENST00000459625 ZNF580Q9UK33 172 aa11.4□□□□□ -0.58
HDAC7-217ENST00000459625 TRBV7-7A0A0K0K1E9 115 aa11.4□□□□□ -0.59
HDAC7-217ENST00000459625 NHLRC4P0CG21 123 aaPredicted RBP11.4□□□□□ -0.59
HDAC7-217ENST00000459625 C22orf24Q9Y442 160 aa11.39□□□□□ -0.59
HDAC7-217ENST00000459625 IGLV8-61A0A075B6I0 122 aa11.38□□□□□ -0.59
HDAC7-217ENST00000459625 CCDC168Q8NDH2 2452 aa11.38□□□□□ -0.59
HDAC7-217ENST00000459625 COX7CP15954 63 aa11.38□□□□□ -0.59
HDAC7-217ENST00000459625 CSDC2Q9Y534 153 aaKnown RBP11.38□□□□□ -0.59
HDAC7-217ENST00000459625 ACACBO00763 2458 aa11.38□□□□□ -0.59
HDAC7-217ENST00000459625 COX6B2Q6YFQ2 88 aa11.36□□□□□ -0.59
HDAC7-217ENST00000459625 CRIP3Q6Q6R5 217 aa11.35□□□□□ -0.59
HDAC7-217ENST00000459625 C16orf95Q9H693 158 aa11.35□□□□□ -0.59
HDAC7-217ENST00000459625 Q8N3U1 123 aa11.34□□□□□ -0.59
HDAC7-217ENST00000459625 AGRNO00468 2067 aa11.34□□□□□ -0.59
HDAC7-217ENST00000459625 TRAV7A0A075B6U4 112 aa11.33□□□□□ -0.6
HDAC7-217ENST00000459625 TYMSOSQ8TAI1 123 aa11.33□□□□□ -0.6
HDAC7-217ENST00000459625 ADAMTSL4-AS1Q5T5F5 129 aa11.32□□□□□ -0.6
HDAC7-217ENST00000459625 IGIPA6NJ69 53 aa11.32□□□□□ -0.6
HDAC7-217ENST00000459625 NAV3Q8IVL0 2385 aa11.32□□□□□ -0.6
HDAC7-217ENST00000459625 COL5A1P20908 1838 aaPredicted RBP11.32□□□□□ -0.6
HDAC7-217ENST00000459625 C2orf91Q6ZV80 131 aa11.31□□□□□ -0.6
HDAC7-217ENST00000459625 C1orf64Q8NEQ6 169 aa11.31□□□□□ -0.6
HDAC7-217ENST00000459625 TSPEAR-AS2P59090 65 aa11.31□□□□□ -0.6
HDAC7-217ENST00000459625 PHF5AQ7RTV0 110 aaKnown RBP11.31□□□□□ -0.6
HDAC7-217ENST00000459625 A0A1W2PPR1 153 aa11.29□□□□□ -0.6
HDAC7-217ENST00000459625 KIAA0087Q14695 138 aa11.28□□□□□ -0.6
HDAC7-217ENST00000459625 RTL8CO15255 209 aa11.28□□□□□ -0.6
HDAC7-217ENST00000459625 MUC7Q8TAX7 377 aa11.28□□□□□ -0.6
HDAC7-217ENST00000459625 PRO3102Q9H379 93 aa11.27□□□□□ -0.6
HDAC7-217ENST00000459625 A0A1B0GU69 56 aa11.27□□□□□ -0.61
HDAC7-217ENST00000459625 SMIM26A0A096LP01 95 aa11.26□□□□□ -0.61
HDAC7-217ENST00000459625 Q96NJ1 140 aa11.26□□□□□ -0.61
HDAC7-217ENST00000459625 IMUPQ9GZP8 106 aa11.25□□□□□ -0.61
HDAC7-217ENST00000459625 CACNA1AO00555 2505 aa11.25□□□□□ -0.61
HDAC7-217ENST00000459625 ANKHD1Q8IWZ3 2542 aaKnown RBP11.24□□□□□ -0.61
HDAC7-217ENST00000459625 SMIM29Q86T20 159 aa11.24□□□□□ -0.61
HDAC7-217ENST00000459625 EML5Q05BV3 1969 aa11.24□□□□□ -0.61
HDAC7-217ENST00000459625 Q8N2B8 174 aa11.23□□□□□ -0.61
HDAC7-217ENST00000459625 LINC00315P59091 139 aa11.22□□□□□ -0.61
HDAC7-217ENST00000459625 ATP11AUNQ6ZP68 121 aa11.21□□□□□ -0.61
HDAC7-217ENST00000459625 LINC00167Q96N53 147 aa11.21□□□□□ -0.62
HDAC7-217ENST00000459625 ACYP2P14621 99 aa11.2□□□□□ -0.62
HDAC7-217ENST00000459625 LINC00313P59037 77 aa11.2□□□□□ -0.62
HDAC7-217ENST00000459625 LTBP2Q14767 1821 aa11.2□□□□□ -0.62
HDAC7-217ENST00000459625 SPINT4Q6UDR6 99 aa11.19□□□□□ -0.62
HDAC7-217ENST00000459625 MYO18BQ8IUG5 2567 aa11.18□□□□□ -0.62
HDAC7-217ENST00000459625 SPAG11AQ6PDA7 123 aa11.18□□□□□ -0.62
HDAC7-217ENST00000459625 KRTAP24-1Q3LI83 254 aa11.18□□□□□ -0.62
HDAC7-217ENST00000459625 RPL37AP61513 92 aaKnown RBP11.17□□□□□ -0.62
HDAC7-217ENST00000459625 A0A1B0GUV1 79 aa11.16□□□□□ -0.62
HDAC7-217ENST00000459625 C6orf48Q9UBA6 75 aa11.16□□□□□ -0.62
HDAC7-217ENST00000459625 TMEM254Q8TBM7 123 aa11.15□□□□□ -0.62
HDAC7-217ENST00000459625 F8WDY8 70 aa11.14□□□□□ -0.63
HDAC7-217ENST00000459625 TTC28Q96AY4 2481 aa11.13□□□□□ -0.63
HDAC7-217ENST00000459625 C9orf92A6NGG3 77 aa11.13□□□□□ -0.63
HDAC7-217ENST00000459625 AMELXQ99217 191 aa11.13□□□□□ -0.63
HDAC7-217ENST00000459625 Q6ZRP5 223 aa11.12□□□□□ -0.63
HDAC7-217ENST00000459625 LINC00846Q9NV44 126 aa11.12□□□□□ -0.63
HDAC7-217ENST00000459625 SMR3BP02814 79 aaPredicted RBP11.12□□□□□ -0.63
HDAC7-217ENST00000459625 APLNQ9ULZ1 77 aa11.11□□□□□ -0.63
HDAC7-217ENST00000459625 NBDYA0A0U1RRE5 68 aa11.1□□□□□ -0.63
HDAC7-217ENST00000459625 EPM2AB3EWF7 344 aa11.1□□□□□ -0.63
HDAC7-217ENST00000459625 NAV2Q8IVL1 2488 aa11.09□□□□□ -0.63
HDAC7-217ENST00000459625 WWC2-AS2Q96NR7 200 aa11.09□□□□□ -0.63
HDAC7-217ENST00000459625 ST20-AS1Q8NBB2 130 aa11.09□□□□□ -0.63
HDAC7-217ENST00000459625 CNFNQ9BYD5 112 aa11.09□□□□□ -0.63
HDAC7-217ENST00000459625 PTPRSQ13332 1948 aa11.07□□□□□ -0.64
HDAC7-217ENST00000459625 CDIP1Q9H305 208 aa11.07□□□□□ -0.64
HDAC7-217ENST00000459625 KIF25-AS1Q9Y6Z4 181 aa11.07□□□□□ -0.64
HDAC7-217ENST00000459625 SPATA3Q8NHX4 192 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms