RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 PKHD1L1Q86WI1 4243 aa10.92□□□□□ -0.66
SCARNA2-201ENST00000458748 A0A1W2PNN7 141 aa10.92□□□□□ -0.66
SCARNA2-201ENST00000458748 NDUFC2-KCTD14E9PQ53 114 aa10.92□□□□□ -0.66
SCARNA2-201ENST00000458748 LINC00614P0C842 121 aa10.92□□□□□ -0.66
SCARNA2-201ENST00000458748 GAGE2EQ4V326 116 aa10.92□□□□□ -0.66
SCARNA2-201ENST00000458748 C2orf82Q6UX34 121 aa10.92□□□□□ -0.66
SCARNA2-201ENST00000458748 CST9LQ9H4G1 147 aa10.92□□□□□ -0.66
SCARNA2-201ENST00000458748 GAGE2DQ9UEU5 116 aa10.92□□□□□ -0.66
SCARNA2-201ENST00000458748 FAT3Q8TDW7 4589 aa10.91□□□□□ -0.66
SCARNA2-201ENST00000458748 C18orf32Q8TCD1 76 aa10.91□□□□□ -0.66
SCARNA2-201ENST00000458748 H3BRM9 83 aa10.9□□□□□ -0.66
SCARNA2-201ENST00000458748 PDZD11Q5EBL8 140 aa10.9□□□□□ -0.66
SCARNA2-201ENST00000458748 SPINK6Q6UWN8 80 aa10.9□□□□□ -0.66
SCARNA2-201ENST00000458748 F8VRH5 84 aa10.89□□□□□ -0.67
SCARNA2-201ENST00000458748 HBDP02042 147 aa10.89□□□□□ -0.67
SCARNA2-201ENST00000458748 IGLV5-45A0A087WSX0 123 aa10.88□□□□□ -0.67
SCARNA2-201ENST00000458748 REG3GQ6UW15 175 aa10.88□□□□□ -0.67
SCARNA2-201ENST00000458748 NDUFA6P56556 154 aa10.87□□□□□ -0.67
SCARNA2-201ENST00000458748 PHF5AQ7RTV0 110 aaKnown RBP10.87□□□□□ -0.67
SCARNA2-201ENST00000458748 COX7B2Q8TF08 81 aa10.87□□□□□ -0.67
SCARNA2-201ENST00000458748 SMIM1B2RUZ4 78 aa10.86□□□□□ -0.67
SCARNA2-201ENST00000458748 ATP5LO75964 103 aa10.86□□□□□ -0.67
SCARNA2-201ENST00000458748 FAM19A5Q7Z5A7 132 aaPredicted RBP10.86□□□□□ -0.67
SCARNA2-201ENST00000458748 PSORS1C2Q9UIG4 136 aa10.85□□□□□ -0.67
SCARNA2-201ENST00000458748 PLA2G2DQ9UNK4 145 aa10.85□□□□□ -0.67
SCARNA2-201ENST00000458748 HMCN2Q8NDA2 5059 aa10.85□□□□□ -0.67
SCARNA2-201ENST00000458748 FAM168BA1KXE4 195 aa10.84□□□□□ -0.67
SCARNA2-201ENST00000458748 C1orf137Q5JT78 98 aa10.84□□□□□ -0.67
SCARNA2-201ENST00000458748 M0QXV9 152 aa10.83□□□□□ -0.68
SCARNA2-201ENST00000458748 MT1HL1P0DM35 61 aa10.83□□□□□ -0.68
SCARNA2-201ENST00000458748 UBE2BP63146 152 aa10.83□□□□□ -0.68
SCARNA2-201ENST00000458748 CHCHD1Q96BP2 118 aaKnown RBP10.83□□□□□ -0.68
SCARNA2-201ENST00000458748 YPEL4Q96NS1 127 aa10.83□□□□□ -0.68
SCARNA2-201ENST00000458748 SPINK8P0C7L1 97 aa10.82□□□□□ -0.68
SCARNA2-201ENST00000458748 IGLC3P0DOY3 106 aa10.82□□□□□ -0.68
SCARNA2-201ENST00000458748 URB1-AS1Q96HZ7 61 aa10.82□□□□□ -0.68
SCARNA2-201ENST00000458748 A0A096LNJ9 63 aa10.81□□□□□ -0.68
SCARNA2-201ENST00000458748 SRSF9Q13242 221 aaKnown RBP eCLIP10.81□□□□□ -0.68
SCARNA2-201ENST00000458748 PMCHL1Q16048 86 aa10.81□□□□□ -0.68
SCARNA2-201ENST00000458748 C9orf129Q5T035 196 aaKnown RBP10.81□□□□□ -0.68
SCARNA2-201ENST00000458748 LINC01600Q96MT4 127 aa10.81□□□□□ -0.68
SCARNA2-201ENST00000458748 LBHQ53QV2 105 aaPredicted RBP10.8□□□□□ -0.68
SCARNA2-201ENST00000458748 CBLN2Q8IUK8 224 aa10.8□□□□□ -0.68
SCARNA2-201ENST00000458748 SLC7A5P1Q8MH63 180 aa10.8□□□□□ -0.68
SCARNA2-201ENST00000458748 ODF1Q14990 250 aa10.79□□□□□ -0.68
SCARNA2-201ENST00000458748 BAGE3Q86Y29 109 aa10.79□□□□□ -0.68
SCARNA2-201ENST00000458748 SFTA2Q6UW10 78 aa10.78□□□□□ -0.68
SCARNA2-201ENST00000458748 XAGE1AQ9HD64 81 aa10.78□□□□□ -0.68
SCARNA2-201ENST00000458748 DIRC1Q969H9 104 aa10.77□□□□□ -0.69
SCARNA2-201ENST00000458748 HSBP1O75506 76 aa10.76□□□□□ -0.69
SCARNA2-201ENST00000458748 IGLV7-43P04211 117 aa10.76□□□□□ -0.69
SCARNA2-201ENST00000458748 IGLV5-39A0A0G2JS06 123 aa10.75□□□□□ -0.69
SCARNA2-201ENST00000458748 ZNF22P17026 224 aaPredicted RBP10.75□□□□□ -0.69
SCARNA2-201ENST00000458748 TMEM170BQ5T4T1 132 aa10.75□□□□□ -0.69
SCARNA2-201ENST00000458748 TP73-AS1Q9UF72 201 aa10.75□□□□□ -0.69
SCARNA2-201ENST00000458748 CHTOPQ9Y3Y2 248 aaKnown RBP10.75□□□□□ -0.69
SCARNA2-201ENST00000458748 KRTAP7-1Q8IUC3 87 aa10.74□□□□□ -0.69
SCARNA2-201ENST00000458748 IFI27L1Q96BM0 104 aa10.74□□□□□ -0.69
SCARNA2-201ENST00000458748 C22orf24Q9Y442 160 aa10.74□□□□□ -0.69
SCARNA2-201ENST00000458748 TRAV12-1A0A0B4J245 112 aa10.73□□□□□ -0.69
SCARNA2-201ENST00000458748 NUPR1O60356 82 aa10.73□□□□□ -0.69
SCARNA2-201ENST00000458748 C11orf86A6NJI1 115 aa10.72□□□□□ -0.69
SCARNA2-201ENST00000458748 TRGC2P03986 189 aa10.72□□□□□ -0.69
SCARNA2-201ENST00000458748 MRPL55Q7Z7F7 128 aaKnown RBP10.72□□□□□ -0.69
SCARNA2-201ENST00000458748 COX17Q14061 63 aa10.71□□□□□ -0.69
SCARNA2-201ENST00000458748 UBR4Q5T4S7 5183 aa10.7□□□□□ -0.7
SCARNA2-201ENST00000458748 NKAPP1Q8N9T2 125 aa10.7□□□□□ -0.7
SCARNA2-201ENST00000458748 H0Y9J4 135 aa10.69□□□□□ -0.7
SCARNA2-201ENST00000458748 PFN2P35080 140 aa10.69□□□□□ -0.7
SCARNA2-201ENST00000458748 KRTAP10-8P60410 259 aa10.69□□□□□ -0.7
SCARNA2-201ENST00000458748 KRTAP11-1Q8IUC1 163 aa10.69□□□□□ -0.7
SCARNA2-201ENST00000458748 ERG28Q9UKR5 140 aa10.68□□□□□ -0.7
SCARNA2-201ENST00000458748 LEPROTL1O95214 131 aa10.66□□□□□ -0.7
SCARNA2-201ENST00000458748 FAM19A2Q8N3H0 131 aa10.66□□□□□ -0.7
SCARNA2-201ENST00000458748 IGLV5-37A0A075B6J1 123 aa10.65□□□□□ -0.7
SCARNA2-201ENST00000458748 TMEM223A0PJW6 202 aa10.65□□□□□ -0.7
SCARNA2-201ENST00000458748 RPL24P83731 157 aaKnown RBP10.65□□□□□ -0.7
SCARNA2-201ENST00000458748 HSPB8Q9UJY1 196 aa10.65□□□□□ -0.7
SCARNA2-201ENST00000458748 ZNF861PO60384 105 aa10.64□□□□□ -0.71
SCARNA2-201ENST00000458748 SERF1AO75920 110 aa10.64□□□□□ -0.71
SCARNA2-201ENST00000458748 LINC00167Q96N53 147 aa10.64□□□□□ -0.71
SCARNA2-201ENST00000458748 COLCA2A8K830 154 aa10.63□□□□□ -0.71
SCARNA2-201ENST00000458748 RPL28P46779 137 aaKnown RBP10.63□□□□□ -0.71
SCARNA2-201ENST00000458748 ZNF625Q96I27 306 aaPredicted RBP10.63□□□□□ -0.71
SCARNA2-201ENST00000458748 LINC00587B1AMM8 73 aa10.62□□□□□ -0.71
SCARNA2-201ENST00000458748 H0Y8G0 127 aa10.62□□□□□ -0.71
SCARNA2-201ENST00000458748 BCE1O60756 84 aa10.62□□□□□ -0.71
SCARNA2-201ENST00000458748 ATP6V1G1O75348 118 aa10.62□□□□□ -0.71
SCARNA2-201ENST00000458748 SND1-IT1Q9HBX3 110 aa10.62□□□□□ -0.71
SCARNA2-201ENST00000458748 TNXBP22105 4242 aa10.61□□□□□ -0.71
SCARNA2-201ENST00000458748 IGLV1-50A0A075B6I6 118 aa10.61□□□□□ -0.71
SCARNA2-201ENST00000458748 GAGE10A6NGK3 116 aa10.61□□□□□ -0.71
SCARNA2-201ENST00000458748 RPL37AP8A6NKH3 93 aa10.61□□□□□ -0.71
SCARNA2-201ENST00000458748 PLNP26678 52 aa10.61□□□□□ -0.71
SCARNA2-201ENST00000458748 LINC00158P58513 81 aa10.61□□□□□ -0.71
SCARNA2-201ENST00000458748 HERV-K104P63124 156 aa10.6□□□□□ -0.71
SCARNA2-201ENST00000458748 RPL13AP40429 203 aaKnown RBP10.59□□□□□ -0.71
SCARNA2-201ENST00000458748 LINC00310P59036 64 aa10.59□□□□□ -0.71
SCARNA2-201ENST00000458748 FABP4P15090 132 aa10.57□□□□□ -0.72
SCARNA2-201ENST00000458748 HERVK_113P61574 105 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms