RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 TYMSOSQ8TAI1 123 aa3.32□□□□□ -1.88
VPS8-214ENST00000458721 SMIM7Q9BQ49 75 aa3.32□□□□□ -1.88
VPS8-214ENST00000458721 NAT8BQ9UHF3 227 aa3.32□□□□□ -1.88
VPS8-214ENST00000458721 A0A087X002 238 aa3.31□□□□□ -1.88
VPS8-214ENST00000458721 BCE1O60756 84 aa3.31□□□□□ -1.88
VPS8-214ENST00000458721 CXCL5P42830 114 aa3.31□□□□□ -1.88
VPS8-214ENST00000458721 RPL39P62891 51 aaKnown RBP3.31□□□□□ -1.88
VPS8-214ENST00000458721 MRPL55Q7Z7F7 128 aaKnown RBP3.31□□□□□ -1.88
VPS8-214ENST00000458721 Q8IZM0 81 aa3.31□□□□□ -1.88
VPS8-214ENST00000458721 FAM104AQ969W3 186 aa3.31□□□□□ -1.88
VPS8-214ENST00000458721 C2orf88Q9BSF0 95 aa3.31□□□□□ -1.88
VPS8-214ENST00000458721 IGKV2D-30A0A075B6S6 120 aa3.3□□□□□ -1.88
VPS8-214ENST00000458721 ZNF727A8MUV8 499 aa3.3□□□□□ -1.88
VPS8-214ENST00000458721 F8W036 122 aa3.3□□□□□ -1.88
VPS8-214ENST00000458721 SMKR1H3BMG3 65 aa3.3□□□□□ -1.88
VPS8-214ENST00000458721 TSPAN13O95857 204 aa3.3□□□□□ -1.88
VPS8-214ENST00000458721 PRSS2P07478 247 aa3.3□□□□□ -1.88
VPS8-214ENST00000458721 CKS2P33552 79 aa3.3□□□□□ -1.88
VPS8-214ENST00000458721 CKS1BP61024 79 aa3.3□□□□□ -1.88
VPS8-214ENST00000458721 SEC11AP67812 179 aa3.3□□□□□ -1.88
VPS8-214ENST00000458721 MRPL51Q4U2R6 128 aaKnown RBP3.3□□□□□ -1.88
VPS8-214ENST00000458721 LINC00242Q5T6M2 205 aa3.3□□□□□ -1.88
VPS8-214ENST00000458721 Q6ZN92 141 aa3.3□□□□□ -1.88
VPS8-214ENST00000458721 TEX43Q6ZNM6 134 aa3.3□□□□□ -1.88
VPS8-214ENST00000458721 FAM19A3Q7Z5A8 133 aa3.3□□□□□ -1.88
VPS8-214ENST00000458721 TCTE3Q8IZS6 198 aa3.3□□□□□ -1.88
VPS8-214ENST00000458721 LINC00304Q8N9R0 145 aa3.3□□□□□ -1.88
VPS8-214ENST00000458721 TMEM141Q96I45 108 aa3.3□□□□□ -1.88
VPS8-214ENST00000458721 CTDSP1Q9GZU7 261 aa3.3□□□□□ -1.88
VPS8-214ENST00000458721 C22orf24Q9Y442 160 aa3.3□□□□□ -1.88
VPS8-214ENST00000458721 V9GYV3 84 aa3.3□□□□□ -1.88
VPS8-214ENST00000458721 IGLV4-3A0A075B6K6 122 aa3.29□□□□□ -1.88
VPS8-214ENST00000458721 F8VRH5 84 aa3.29□□□□□ -1.88
VPS8-214ENST00000458721 K7EMI3 77 aa3.29□□□□□ -1.88
VPS8-214ENST00000458721 RAB5AP20339 215 aa3.29□□□□□ -1.88
VPS8-214ENST00000458721 FAM74A3Q4VXF1 159 aa3.29□□□□□ -1.88
VPS8-214ENST00000458721 PAPPA-AS1Q5QFB9 102 aa3.29□□□□□ -1.88
VPS8-214ENST00000458721 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
VPS8-214ENST00000458721 C2orf82Q6UX34 121 aa3.29□□□□□ -1.88
VPS8-214ENST00000458721 LINC00173Q6ZV60 143 aa3.29□□□□□ -1.88
VPS8-214ENST00000458721 FP248Q71RG6 208 aaPredicted RBP3.29□□□□□ -1.88
VPS8-214ENST00000458721 LAMTOR2Q9Y2Q5 125 aa3.29□□□□□ -1.88
VPS8-214ENST00000458721 IGLV5-37A0A075B6J1 123 aa3.28□□□□□ -1.88
VPS8-214ENST00000458721 SMIM27A0A1W2PRY6 76 aa3.28□□□□□ -1.88
VPS8-214ENST00000458721 D6R8Y8 96 aa3.28□□□□□ -1.88
VPS8-214ENST00000458721 CEBPGP53567 150 aa3.28□□□□□ -1.88
VPS8-214ENST00000458721 HERVK_113P63121 156 aa3.28□□□□□ -1.88
VPS8-214ENST00000458721 KRTAP13-1Q8IUC0 172 aa3.28□□□□□ -1.88
VPS8-214ENST00000458721 ORMDL3Q8N138 153 aa3.28□□□□□ -1.88
VPS8-214ENST00000458721 EIF5A2Q9GZV4 153 aaKnown RBP3.28□□□□□ -1.88
VPS8-214ENST00000458721 IGLV7-46A0A075B6I9 117 aa3.27□□□□□ -1.89
VPS8-214ENST00000458721 IGKV2D-26A0A0A0MRZ7 120 aa3.27□□□□□ -1.89
VPS8-214ENST00000458721 A0A1B0GXF2 115 aa3.27□□□□□ -1.89
VPS8-214ENST00000458721 PRSS47A8MTI9 375 aa3.27□□□□□ -1.89
VPS8-214ENST00000458721 KRTAP13-2Q52LG2 175 aa3.27□□□□□ -1.89
VPS8-214ENST00000458721 C6orf226Q5I0X4 101 aa3.27□□□□□ -1.89
VPS8-214ENST00000458721 SPAG11AQ6PDA7 123 aa3.27□□□□□ -1.89
VPS8-214ENST00000458721 ATP5L2Q7Z4Y8 100 aa3.27□□□□□ -1.89
VPS8-214ENST00000458721 MPLKIPQ8TAP9 179 aa3.27□□□□□ -1.89
VPS8-214ENST00000458721 AMELXQ99217 191 aa3.27□□□□□ -1.89
VPS8-214ENST00000458721 ALKBH7Q9BT30 221 aaPredicted RBP3.27□□□□□ -1.89
VPS8-214ENST00000458721 KRTAP2-2Q9BYT5 123 aa3.27□□□□□ -1.89
VPS8-214ENST00000458721 CYSLTR1Q9Y271 337 aa3.27□□□□□ -1.89
VPS8-214ENST00000458721 NPYP01303 97 aa3.26□□□□□ -1.89
VPS8-214ENST00000458721 G0S2P27469 103 aa3.26□□□□□ -1.89
VPS8-214ENST00000458721 UBE2AP49459 152 aa3.26□□□□□ -1.89
VPS8-214ENST00000458721 LINC01547P58512 204 aaPredicted RBP3.26□□□□□ -1.89
VPS8-214ENST00000458721 ORMDL2Q53FV1 153 aa3.26□□□□□ -1.89
VPS8-214ENST00000458721 NKAPP1Q8N9T2 125 aa3.26□□□□□ -1.89
VPS8-214ENST00000458721 RETNLBQ9BQ08 111 aa3.26□□□□□ -1.89
VPS8-214ENST00000458721 PPDPFQ9H3Y8 114 aa3.26□□□□□ -1.89
VPS8-214ENST00000458721 XAGE1AQ9HD64 81 aa3.26□□□□□ -1.89
VPS8-214ENST00000458721 NAT8Q9UHE5 227 aa3.26□□□□□ -1.89
VPS8-214ENST00000458721 MUC17Q685J3 4493 aa3.26□□□□□ -1.89
VPS8-214ENST00000458721 LINC01549A6NIU2 74 aa3.25□□□□□ -1.89
VPS8-214ENST00000458721 SRP19P09132 144 aaKnown RBP3.25□□□□□ -1.89
VPS8-214ENST00000458721 RPL23P62829 140 aaKnown RBP3.25□□□□□ -1.89
VPS8-214ENST00000458721 PNRC1Q12796 327 aaPredicted RBP3.25□□□□□ -1.89
VPS8-214ENST00000458721 ASB16-AS1Q495Z4 193 aa3.25□□□□□ -1.89
VPS8-214ENST00000458721 ALKAL2Q6UX46 152 aa3.25□□□□□ -1.89
VPS8-214ENST00000458721 C2orf66Q6UXQ4 117 aa3.25□□□□□ -1.89
VPS8-214ENST00000458721 LINC00469Q8N7U9 141 aa3.25□□□□□ -1.89
VPS8-214ENST00000458721 PRELID3AQ96N28 172 aa3.25□□□□□ -1.89
VPS8-214ENST00000458721 LINC00167Q96N53 147 aa3.25□□□□□ -1.89
VPS8-214ENST00000458721 GNB1LQ9BYB4 327 aa3.25□□□□□ -1.89
VPS8-214ENST00000458721 VCX2Q9H322 139 aa3.25□□□□□ -1.89
VPS8-214ENST00000458721 MAP1LC3AQ9H492 121 aa3.25□□□□□ -1.89
VPS8-214ENST00000458721 TOMM7Q9P0U1 55 aa3.25□□□□□ -1.89
VPS8-214ENST00000458721 ADIRFQ15847 76 aa3.24□□□□□ -1.89
VPS8-214ENST00000458721 PDZD11Q5EBL8 140 aa3.24□□□□□ -1.89
VPS8-214ENST00000458721 TMEM136Q6ZRR5 245 aa3.24□□□□□ -1.89
VPS8-214ENST00000458721 FAM19A2Q8N3H0 131 aa3.24□□□□□ -1.89
VPS8-214ENST00000458721 TIMM17AQ99595 171 aa3.24□□□□□ -1.89
VPS8-214ENST00000458721 GEMIN7Q9H840 131 aaKnown RBP3.24□□□□□ -1.89
VPS8-214ENST00000458721 NXT2Q9NPJ8 142 aaKnown RBP3.24□□□□□ -1.89
VPS8-214ENST00000458721 CRCT1Q9UGL9 99 aa3.24□□□□□ -1.89
VPS8-214ENST00000458721 CDKN2A-AS1Q9UH64 79 aa3.24□□□□□ -1.89
VPS8-214ENST00000458721 IGLV5-45A0A087WSX0 123 aa3.23□□□□□ -1.89
VPS8-214ENST00000458721 A0A1B0GVG6 124 aa3.23□□□□□ -1.89
VPS8-214ENST00000458721 IGIPA6NJ69 53 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms