RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 C2orf66Q6UXQ4 117 aa6.1□□□□□ -1.43
HDLBP-227ENST00000458564 ALKBH7Q9BT30 221 aaPredicted RBP6.1□□□□□ -1.43
HDLBP-227ENST00000458564 VCX2Q9H322 139 aa6.1□□□□□ -1.43
HDLBP-227ENST00000458564 TOMM7Q9P0U1 55 aa6.1□□□□□ -1.43
HDLBP-227ENST00000458564 IGIPA6NJ69 53 aa6.09□□□□□ -1.43
HDLBP-227ENST00000458564 K7EMI3 77 aa6.09□□□□□ -1.43
HDLBP-227ENST00000458564 CXCL5P42830 114 aa6.09□□□□□ -1.43
HDLBP-227ENST00000458564 HERVK_113P63121 156 aa6.09□□□□□ -1.43
HDLBP-227ENST00000458564 ZC2HC1BQ5TFG8 222 aa6.09□□□□□ -1.43
HDLBP-227ENST00000458564 MAP1LC3AQ9H492 121 aa6.09□□□□□ -1.43
HDLBP-227ENST00000458564 KRTAP9-6A0A140TA67 174 aa6.08□□□□□ -1.44
HDLBP-227ENST00000458564 SEC11AP67812 179 aa6.08□□□□□ -1.44
HDLBP-227ENST00000458564 CTAG1AP78358 180 aa6.08□□□□□ -1.44
HDLBP-227ENST00000458564 SRSF3P84103 164 aaKnown RBP6.08□□□□□ -1.44
HDLBP-227ENST00000458564 PEA15Q15121 130 aa6.08□□□□□ -1.44
HDLBP-227ENST00000458564 TPRXLQ17RH7 258 aa6.08□□□□□ -1.44
HDLBP-227ENST00000458564 KRTAP13-2Q52LG2 175 aa6.08□□□□□ -1.44
HDLBP-227ENST00000458564 ORMDL2Q53FV1 153 aa6.08□□□□□ -1.44
HDLBP-227ENST00000458564 KRTAP13-1Q8IUC0 172 aa6.08□□□□□ -1.44
HDLBP-227ENST00000458564 Q8N8P6 123 aa6.08□□□□□ -1.44
HDLBP-227ENST00000458564 CDKN2A-AS1Q9UH64 79 aa6.08□□□□□ -1.44
HDLBP-227ENST00000458564 LOC389332A0A1B0GUA5 103 aa6.07□□□□□ -1.44
HDLBP-227ENST00000458564 FAM229BQ4G0N7 80 aa6.07□□□□□ -1.44
HDLBP-227ENST00000458564 PAPPA-AS1Q5QFB9 102 aa6.07□□□□□ -1.44
HDLBP-227ENST00000458564 LINC00167Q96N53 147 aa6.07□□□□□ -1.44
HDLBP-227ENST00000458564 IGLV5-37A0A075B6J1 123 aa6.06□□□□□ -1.44
HDLBP-227ENST00000458564 RPL37AP8A6NKH3 93 aa6.05□□□□□ -1.44
HDLBP-227ENST00000458564 LINC00304Q8N9R0 145 aa6.05□□□□□ -1.44
HDLBP-227ENST00000458564 TIMM17AQ99595 171 aa6.05□□□□□ -1.44
HDLBP-227ENST00000458564 RETNLBQ9BQ08 111 aa6.05□□□□□ -1.44
HDLBP-227ENST00000458564 GEMIN7Q9H840 131 aaKnown RBP6.05□□□□□ -1.44
HDLBP-227ENST00000458564 ANAPC11Q9NYG5 84 aa6.05□□□□□ -1.44
HDLBP-227ENST00000458564 SMIM1B2RUZ4 78 aa6.04□□□□□ -1.44
HDLBP-227ENST00000458564 CDIP1Q9H305 208 aa6.04□□□□□ -1.44
HDLBP-227ENST00000458564 NXT2Q9NPJ8 142 aaKnown RBP6.04□□□□□ -1.44
HDLBP-227ENST00000458564 hCG_2014768A0A024R1R8 64 aa6.03□□□□□ -1.44
HDLBP-227ENST00000458564 IGLV5-45A0A087WSX0 123 aa6.03□□□□□ -1.44
HDLBP-227ENST00000458564 G0S2P27469 103 aa6.03□□□□□ -1.44
HDLBP-227ENST00000458564 UBE2AP49459 152 aa6.03□□□□□ -1.44
HDLBP-227ENST00000458564 PDZD11Q5EBL8 140 aa6.03□□□□□ -1.44
HDLBP-227ENST00000458564 IGLV7-46A0A075B6I9 117 aa6.02□□□□□ -1.45
HDLBP-227ENST00000458564 GAGE10A6NGK3 116 aa6.02□□□□□ -1.45
HDLBP-227ENST00000458564 PNRC1Q12796 327 aaPredicted RBP6.02□□□□□ -1.45
HDLBP-227ENST00000458564 COX7B2Q8TF08 81 aa6.02□□□□□ -1.45
HDLBP-227ENST00000458564 TOMM6Q96B49 74 aa6.02□□□□□ -1.45
HDLBP-227ENST00000458564 IGKV2D-26A0A0A0MRZ7 120 aa6.01□□□□□ -1.45
HDLBP-227ENST00000458564 TINCRA0A1B0GVN0 87 aa6.01□□□□□ -1.45
HDLBP-227ENST00000458564 ERASQ7Z444 233 aa6.01□□□□□ -1.45
HDLBP-227ENST00000458564 NKAPP1Q8N9T2 125 aa6.01□□□□□ -1.45
HDLBP-227ENST00000458564 ANAPC16Q96DE5 110 aa6□□□□□ -1.45
HDLBP-227ENST00000458564 IGKV2-28A0A075B6P5 120 aa5.99□□□□□ -1.45
HDLBP-227ENST00000458564 IGKV2D-28P01615 120 aa5.99□□□□□ -1.45
HDLBP-227ENST00000458564 LINC01549A6NIU2 74 aa5.98□□□□□ -1.45
HDLBP-227ENST00000458564 MT-ND4LP03901 98 aa5.98□□□□□ -1.45
HDLBP-227ENST00000458564 PRLHP81277 87 aa5.98□□□□□ -1.45
HDLBP-227ENST00000458564 SCGB3A1Q96QR1 104 aa5.98□□□□□ -1.45
HDLBP-227ENST00000458564 ATP5LO75964 103 aa5.97□□□□□ -1.45
HDLBP-227ENST00000458564 VPREB1P12018 145 aa5.97□□□□□ -1.45
HDLBP-227ENST00000458564 ADCYAP1P18509 176 aa5.97□□□□□ -1.45
HDLBP-227ENST00000458564 RAB5BP61020 215 aa5.97□□□□□ -1.45
HDLBP-227ENST00000458564 TMEM126AQ9H061 195 aa5.97□□□□□ -1.45
HDLBP-227ENST00000458564 PPDPFQ9H3Y8 114 aa5.97□□□□□ -1.45
HDLBP-227ENST00000458564 LINC01546A6NGU7 62 aa5.96□□□□□ -1.46
HDLBP-227ENST00000458564 SCO1O75880 301 aa5.96□□□□□ -1.46
HDLBP-227ENST00000458564 SPINK8P0C7L1 97 aa5.96□□□□□ -1.46
HDLBP-227ENST00000458564 SPAG11AQ6PDA7 123 aa5.96□□□□□ -1.46
HDLBP-227ENST00000458564 FP248Q71RG6 208 aaPredicted RBP5.96□□□□□ -1.46
HDLBP-227ENST00000458564 FAM19A1Q7Z5A9 133 aa5.96□□□□□ -1.46
HDLBP-227ENST00000458564 PLEKHB2Q96CS7 222 aa5.96□□□□□ -1.46
HDLBP-227ENST00000458564 MRPL18Q9H0U6 180 aaKnown RBP5.96□□□□□ -1.46
HDLBP-227ENST00000458564 CST9LQ9H4G1 147 aa5.96□□□□□ -1.46
HDLBP-227ENST00000458564 IGLV5-39A0A0G2JS06 123 aa5.95□□□□□ -1.46
HDLBP-227ENST00000458564 TMEM238C9JI98 176 aa5.95□□□□□ -1.46
HDLBP-227ENST00000458564 M0R378 163 aa5.95□□□□□ -1.46
HDLBP-227ENST00000458564 C3orf22Q8N5N4 141 aa5.95□□□□□ -1.46
HDLBP-227ENST00000458564 GNB1LQ9BYB4 327 aa5.95□□□□□ -1.46
HDLBP-227ENST00000458564 H3BRM9 83 aa5.94□□□□□ -1.46
HDLBP-227ENST00000458564 PMVKQ15126 192 aa5.94□□□□□ -1.46
HDLBP-227ENST00000458564 SND1-IT1Q9HBX3 110 aa5.94□□□□□ -1.46
HDLBP-227ENST00000458564 PFN2P35080 140 aa5.93□□□□□ -1.46
HDLBP-227ENST00000458564 RPL24P83731 157 aaKnown RBP5.93□□□□□ -1.46
HDLBP-227ENST00000458564 COX17Q14061 63 aa5.93□□□□□ -1.46
HDLBP-227ENST00000458564 ASB16-AS1Q495Z4 193 aa5.93□□□□□ -1.46
HDLBP-227ENST00000458564 CBLN2Q8IUK8 224 aa5.93□□□□□ -1.46
HDLBP-227ENST00000458564 ERG28Q9UKR5 140 aa5.93□□□□□ -1.46
HDLBP-227ENST00000458564 TRAV9-1A0A075B6T8 112 aa5.92□□□□□ -1.46
HDLBP-227ENST00000458564 IGLC3P0DOY3 106 aa5.92□□□□□ -1.46
HDLBP-227ENST00000458564 KIAA1644Q3SXP7 199 aa5.92□□□□□ -1.46
HDLBP-227ENST00000458564 KRTAP13-3Q3SY46 172 aa5.92□□□□□ -1.46
HDLBP-227ENST00000458564 Q8NDZ9 215 aa5.92□□□□□ -1.46
HDLBP-227ENST00000458564 LCE2DQ5TA82 110 aaPredicted RBP5.91□□□□□ -1.46
HDLBP-227ENST00000458564 SPRR4Q96PI1 79 aa5.91□□□□□ -1.46
HDLBP-227ENST00000458564 HIGD2AQ9BW72 106 aa5.91□□□□□ -1.46
HDLBP-227ENST00000458564 A0A1B0GVG6 124 aa5.9□□□□□ -1.46
HDLBP-227ENST00000458564 SFTA2Q6UW10 78 aa5.9□□□□□ -1.46
HDLBP-227ENST00000458564 ZNF706Q9Y5V0 76 aaPredicted RBP5.9□□□□□ -1.46
HDLBP-227ENST00000458564 ZNF22P17026 224 aaPredicted RBP5.89□□□□□ -1.47
HDLBP-227ENST00000458564 LINC01547P58512 204 aaPredicted RBP5.89□□□□□ -1.47
HDLBP-227ENST00000458564 LINC00337Q8N6G1 96 aa5.89□□□□□ -1.47
HDLBP-227ENST00000458564 RAB14P61106 215 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms