RNA–Protein interactions for RNA: ENST00000456366.1

SNRPFP4-201, Transcript of small nuclear ribonucleoprotein polypeptide F pseudogene 4, humanhuman

BASIC

Gene SNRPFP4, Length 242 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP4-201ENST00000456366 PVALBP20472 110 aaPredicted RBP0.66□□□□□ -2.3
SNRPFP4-201ENST00000456366 SPCS3P61009 180 aa0.66□□□□□ -2.3
SNRPFP4-201ENST00000456366 RPS25P62851 125 aaKnown RBP0.66□□□□□ -2.3
SNRPFP4-201ENST00000456366 PRLHP81277 87 aa0.66□□□□□ -2.3
SNRPFP4-201ENST00000456366 MSMO1Q15800 293 aa0.66□□□□□ -2.3
SNRPFP4-201ENST00000456366 RPL22L1Q6P5R6 122 aaKnown RBP0.66□□□□□ -2.3
SNRPFP4-201ENST00000456366 HRCT1Q6UXD1 115 aa0.66□□□□□ -2.3
SNRPFP4-201ENST00000456366 LINC00305Q7Z4B0 112 aa0.66□□□□□ -2.3
SNRPFP4-201ENST00000456366 LHFPL1Q86WI0 220 aa0.66□□□□□ -2.3
SNRPFP4-201ENST00000456366 CLVS1Q8IUQ0 354 aaPredicted RBP0.66□□□□□ -2.3
SNRPFP4-201ENST00000456366 NUP35Q8NFH5 326 aa0.66□□□□□ -2.3
SNRPFP4-201ENST00000456366 CANT1Q8WVQ1 401 aa0.66□□□□□ -2.3
SNRPFP4-201ENST00000456366 DNAJC9Q8WXX5 260 aa0.66□□□□□ -2.3
SNRPFP4-201ENST00000456366 SLC25A21Q9BQT8 299 aaPredicted RBP0.66□□□□□ -2.3
SNRPFP4-201ENST00000456366 LIMD2Q9BT23 127 aa0.66□□□□□ -2.3
SNRPFP4-201ENST00000456366 MND1Q9BWT6 205 aa0.66□□□□□ -2.3
SNRPFP4-201ENST00000456366 ATG5Q9H1Y0 275 aa0.66□□□□□ -2.3
SNRPFP4-201ENST00000456366 IL36BQ9NZH7 164 aa0.66□□□□□ -2.3
SNRPFP4-201ENST00000456366 PRELID1Q9Y255 219 aa0.66□□□□□ -2.3
SNRPFP4-201ENST00000456366 AHNAKQ09666 5890 aaKnown RBP0.66□□□□□ -2.3
SNRPFP4-201ENST00000456366 TRAV21A0A0B4J279 112 aa0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 TRBV6-1A0A0K0K1D8 114 aa0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 M0R381 172 aa0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 COX7A2LO14548 114 aa0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 MYL12AP19105 171 aa0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 ATP6V0CP27449 155 aa0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 NKX2-5P52952 324 aaPredicted RBP0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 DEFA3P59666 94 aa0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 SPAG11BQ08648 103 aa0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 CCDC58Q4VC31 144 aa0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 C10orf113Q5VZT2 155 aa0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 CYP2G1PQ6ZSU1 146 aa0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 EXOC3-AS1Q8N2X6 119 aa0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 PACRGLQ8N7B6 248 aa0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 SMIM19Q96E16 107 aa0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 PACRGQ96M98 296 aaPredicted RBP0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 HOPXQ9BPY8 73 aaPredicted RBP0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 SIKE1Q9BRV8 207 aa0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 NMES1Q9C002 83 aa0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 NAA60Q9H7X0 242 aa0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 EFCAB1Q9HAE3 211 aa0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 TREM1Q9NP99 234 aa0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 TMEM242Q9NWH2 141 aa0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 C22orf24Q9Y442 160 aa0.65□□□□□ -2.31
SNRPFP4-201ENST00000456366 MUC5ACP98088 5654 aa0.64□□□□□ -2.31
SNRPFP4-201ENST00000456366 LINC00862A6NCI5 91 aa0.64□□□□□ -2.31
SNRPFP4-201ENST00000456366 H3BQ15 152 aa0.64□□□□□ -2.31
SNRPFP4-201ENST00000456366 H3BVH4 76 aa0.64□□□□□ -2.31
SNRPFP4-201ENST00000456366 MGPP08493 103 aa0.64□□□□□ -2.31
SNRPFP4-201ENST00000456366 SMIM17P0DL12 118 aa0.64□□□□□ -2.31
SNRPFP4-201ENST00000456366 IAPPP10997 89 aa0.64□□□□□ -2.31
SNRPFP4-201ENST00000456366 TPT1P13693 172 aaKnown RBP0.64□□□□□ -2.31
SNRPFP4-201ENST00000456366 RPS29P62273 56 aaKnown RBP0.64□□□□□ -2.31
SNRPFP4-201ENST00000456366 COTL1Q14019 142 aa0.64□□□□□ -2.31
SNRPFP4-201ENST00000456366 NMSQ5H8A3 153 aa0.64□□□□□ -2.31
SNRPFP4-201ENST00000456366 C12orf73Q69YU5 71 aa0.64□□□□□ -2.31
SNRPFP4-201ENST00000456366 Q6AWC8 147 aa0.64□□□□□ -2.31
SNRPFP4-201ENST00000456366 XAF1Q6GPH4 301 aa0.64□□□□□ -2.31
SNRPFP4-201ENST00000456366 AKAP14Q86UN6 197 aa0.64□□□□□ -2.31
SNRPFP4-201ENST00000456366 C12orf45Q8N5I9 185 aaPredicted RBP0.64□□□□□ -2.31
SNRPFP4-201ENST00000456366 DIRAS2Q96HU8 199 aa0.64□□□□□ -2.31
SNRPFP4-201ENST00000456366 HYLS1Q96M11 299 aa0.64□□□□□ -2.31
SNRPFP4-201ENST00000456366 NAA38Q9BRA0 125 aaKnown RBP0.64□□□□□ -2.31
SNRPFP4-201ENST00000456366 U3KQ87 197 aa0.64□□□□□ -2.31
SNRPFP4-201ENST00000456366 LOC107984156A0A0G2JMH3 177 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 GRIFINA4D1Z8 144 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 H7C2G1 150 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 PMP2P02689 132 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 PET100P0DJ07 73 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 SULT1A3P0DMM9 295 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 SULT1A4P0DMN0 295 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 ZNF80P51504 273 aaPredicted RBP0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 RAB4BP61018 213 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 RRAS2P62070 204 aaPredicted RBP0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 NCS1P62166 190 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 SLC38A11Q08AI6 406 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 IQCJQ1A5X6 159 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 DNAL1Q4LDG9 190 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 UNQ6190/PRO20217Q6UXQ8 127 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 C5orf38Q86SI9 138 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 ARL17AQ8IVW1 177 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 TERB2Q8NHR7 220 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 PLEKHB2Q96CS7 222 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 SMIM12Q96EX1 92 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 SPRR4Q96PI1 79 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 MIEN1Q9BRT3 115 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 MED28Q9H204 178 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 XAGE1AQ9HD64 81 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 COPZ2Q9P299 210 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 CACFD1Q9UGQ2 172 aa0.63□□□□□ -2.31
SNRPFP4-201ENST00000456366 TRBV19A0A075B6N1 114 aa0.62□□□□□ -2.31
SNRPFP4-201ENST00000456366 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.62□□□□□ -2.31
SNRPFP4-201ENST00000456366 C3orf85A0A1B0GTC6 90 aa0.62□□□□□ -2.31
SNRPFP4-201ENST00000456366 LINC00959A0A1B0GUT2 108 aa0.62□□□□□ -2.31
SNRPFP4-201ENST00000456366 PDCD5O14737 125 aa0.62□□□□□ -2.31
SNRPFP4-201ENST00000456366 ARL6IP5O75915 188 aa0.62□□□□□ -2.31
SNRPFP4-201ENST00000456366 ATP6V1G2O95670 118 aa0.62□□□□□ -2.31
SNRPFP4-201ENST00000456366 PYYP10082 97 aa0.62□□□□□ -2.31
SNRPFP4-201ENST00000456366 RNASE3P12724 160 aaKnown RBP0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms