RNA–Protein interactions for RNA: ENST00000455571.5

RUNX1-208, Transcript of runt related transcription factor 1, humanhuman

TSL 3

Gene RUNX1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-208ENST00000455571 SMIM1B2RUZ4 78 aa11.47□□□□□ -0.57
RUNX1-208ENST00000455571 ATP5LO75964 103 aa11.47□□□□□ -0.57
RUNX1-208ENST00000455571 TLX1NBP0CAT3 122 aa11.47□□□□□ -0.57
RUNX1-208ENST00000455571 PDZD11Q5EBL8 140 aa11.47□□□□□ -0.57
RUNX1-208ENST00000455571 CHCHD1Q96BP2 118 aaKnown RBP11.47□□□□□ -0.57
RUNX1-208ENST00000455571 DMBT1Q9UGM3 2413 aaPredicted RBP11.47□□□□□ -0.57
RUNX1-208ENST00000455571 HNRNPA3P51991 378 aaKnown RBP11.46□□□□□ -0.57
RUNX1-208ENST00000455571 GAGE2EQ4V326 116 aa11.46□□□□□ -0.57
RUNX1-208ENST00000455571 C9orf116Q5BN46 136 aaPredicted RBP11.46□□□□□ -0.57
RUNX1-208ENST00000455571 Q6ZRP5 223 aa11.46□□□□□ -0.57
RUNX1-208ENST00000455571 GAGE2DQ9UEU5 116 aa11.46□□□□□ -0.57
RUNX1-208ENST00000455571 A0A1W2PNN7 141 aa11.45□□□□□ -0.58
RUNX1-208ENST00000455571 TRGC2P03986 189 aa11.45□□□□□ -0.58
RUNX1-208ENST00000455571 MYCBP2O75592 4640 aa11.44□□□□□ -0.58
RUNX1-208ENST00000455571 NDUFC2-KCTD14E9PQ53 114 aa11.44□□□□□ -0.58
RUNX1-208ENST00000455571 H3BRM9 83 aa11.44□□□□□ -0.58
RUNX1-208ENST00000455571 SPINK8P0C7L1 97 aa11.44□□□□□ -0.58
RUNX1-208ENST00000455571 IGLC3P0DOY3 106 aa11.44□□□□□ -0.58
RUNX1-208ENST00000455571 CXCL5P42830 114 aa11.44□□□□□ -0.58
RUNX1-208ENST00000455571 BAGE3Q86Y29 109 aa11.44□□□□□ -0.58
RUNX1-208ENST00000455571 J3QL48 77 aa11.43□□□□□ -0.58
RUNX1-208ENST00000455571 PRR3P79522 188 aaKnown RBP11.43□□□□□ -0.58
RUNX1-208ENST00000455571 COX7B2Q8TF08 81 aa11.43□□□□□ -0.58
RUNX1-208ENST00000455571 F8VRH5 84 aa11.42□□□□□ -0.58
RUNX1-208ENST00000455571 HSBP1O75506 76 aa11.41□□□□□ -0.58
RUNX1-208ENST00000455571 FAM19A5Q7Z5A7 132 aaPredicted RBP11.41□□□□□ -0.58
RUNX1-208ENST00000455571 PKHD1L1Q86WI1 4243 aa11.41□□□□□ -0.58
RUNX1-208ENST00000455571 FAM168BA1KXE4 195 aa11.4□□□□□ -0.58
RUNX1-208ENST00000455571 KRTAP29-1A8MX34 341 aaPredicted RBP11.4□□□□□ -0.58
RUNX1-208ENST00000455571 ZNF22P17026 224 aaPredicted RBP11.4□□□□□ -0.58
RUNX1-208ENST00000455571 COLCA2A8K830 154 aa11.39□□□□□ -0.59
RUNX1-208ENST00000455571 IFI27L1Q96BM0 104 aa11.39□□□□□ -0.59
RUNX1-208ENST00000455571 PHF5AQ7RTV0 110 aaKnown RBP11.38□□□□□ -0.59
RUNX1-208ENST00000455571 C11orf86A6NJI1 115 aa11.37□□□□□ -0.59
RUNX1-208ENST00000455571 FAM19A2Q8N3H0 131 aa11.37□□□□□ -0.59
RUNX1-208ENST00000455571 CHTOPQ9Y3Y2 248 aaKnown RBP11.37□□□□□ -0.59
RUNX1-208ENST00000455571 SERF1AO75920 110 aa11.36□□□□□ -0.59
RUNX1-208ENST00000455571 OXTP01178 125 aa11.36□□□□□ -0.59
RUNX1-208ENST00000455571 C9orf129Q5T035 196 aaKnown RBP11.36□□□□□ -0.59
RUNX1-208ENST00000455571 TMEM170BQ5T4T1 132 aa11.36□□□□□ -0.59
RUNX1-208ENST00000455571 SCO1O75880 301 aa11.35□□□□□ -0.59
RUNX1-208ENST00000455571 TRAV12-1A0A0B4J245 112 aa11.34□□□□□ -0.59
RUNX1-208ENST00000455571 IGLV5-39A0A0G2JS06 123 aa11.34□□□□□ -0.59
RUNX1-208ENST00000455571 M0QXV9 152 aa11.34□□□□□ -0.59
RUNX1-208ENST00000455571 LINC00310P59036 64 aa11.33□□□□□ -0.6
RUNX1-208ENST00000455571 XAGE1AQ9HD64 81 aa11.33□□□□□ -0.6
RUNX1-208ENST00000455571 PSORS1C2Q9UIG4 136 aa11.32□□□□□ -0.6
RUNX1-208ENST00000455571 H0Y8G0 127 aa11.31□□□□□ -0.6
RUNX1-208ENST00000455571 LEPROTL1O95214 131 aa11.31□□□□□ -0.6
RUNX1-208ENST00000455571 UBE2BP63146 152 aa11.31□□□□□ -0.6
RUNX1-208ENST00000455571 KRTAP7-1Q8IUC3 87 aa11.31□□□□□ -0.6
RUNX1-208ENST00000455571 C1orf137Q5JT78 98 aa11.29□□□□□ -0.6
RUNX1-208ENST00000455571 SERTAD4-AS1Q5TG53 156 aa11.29□□□□□ -0.6
RUNX1-208ENST00000455571 SPINK6Q6UWN8 80 aa11.28□□□□□ -0.6
RUNX1-208ENST00000455571 LRP1Q07954 4544 aaKnown RBP11.27□□□□□ -0.61
RUNX1-208ENST00000455571 NUPR1O60356 82 aa11.27□□□□□ -0.61
RUNX1-208ENST00000455571 HSPB8Q9UJY1 196 aa11.27□□□□□ -0.61
RUNX1-208ENST00000455571 TMEM223A0PJW6 202 aa11.26□□□□□ -0.61
RUNX1-208ENST00000455571 FABP4P15090 132 aa11.26□□□□□ -0.61
RUNX1-208ENST00000455571 PFN2P35080 140 aa11.26□□□□□ -0.61
RUNX1-208ENST00000455571 SFTA2Q6UW10 78 aa11.26□□□□□ -0.61
RUNX1-208ENST00000455571 FAT3Q8TDW7 4589 aa11.26□□□□□ -0.61
RUNX1-208ENST00000455571 HERC1Q15751 4861 aa11.25□□□□□ -0.61
RUNX1-208ENST00000455571 ODF1Q14990 250 aa11.25□□□□□ -0.61
RUNX1-208ENST00000455571 KRTAP11-1Q8IUC1 163 aa11.25□□□□□ -0.61
RUNX1-208ENST00000455571 ZNF625Q96I27 306 aaPredicted RBP11.25□□□□□ -0.61
RUNX1-208ENST00000455571 ERG28Q9UKR5 140 aa11.25□□□□□ -0.61
RUNX1-208ENST00000455571 HIST1H2BKO60814 126 aa11.24□□□□□ -0.61
RUNX1-208ENST00000455571 HIST1H2BJP06899 126 aa11.24□□□□□ -0.61
RUNX1-208ENST00000455571 HIST1H2BOP23527 126 aa11.24□□□□□ -0.61
RUNX1-208ENST00000455571 HIST1H2BBP33778 126 aa11.24□□□□□ -0.61
RUNX1-208ENST00000455571 HIST1H2BDP58876 126 aa11.24□□□□□ -0.61
RUNX1-208ENST00000455571 HIST1H2BCP62807 126 aa11.24□□□□□ -0.61
RUNX1-208ENST00000455571 HIST2H2BEQ16778 126 aa11.24□□□□□ -0.61
RUNX1-208ENST00000455571 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.24□□□□□ -0.61
RUNX1-208ENST00000455571 HIST1H2BHQ93079 126 aa11.24□□□□□ -0.61
RUNX1-208ENST00000455571 HIST1H2BNQ99877 126 aa11.24□□□□□ -0.61
RUNX1-208ENST00000455571 HIST1H2BMQ99879 126 aa11.24□□□□□ -0.61
RUNX1-208ENST00000455571 C22orf24Q9Y442 160 aa11.24□□□□□ -0.61
RUNX1-208ENST00000455571 SRSF9Q13242 221 aaKnown RBP eCLIP11.23□□□□□ -0.61
RUNX1-208ENST00000455571 LBHQ53QV2 105 aaPredicted RBP11.23□□□□□ -0.61
RUNX1-208ENST00000455571 REG3GQ6UW15 175 aa11.23□□□□□ -0.61
RUNX1-208ENST00000455571 IGLV7-43P04211 117 aa11.22□□□□□ -0.61
RUNX1-208ENST00000455571 PLNP26678 52 aa11.21□□□□□ -0.61
RUNX1-208ENST00000455571 COX17Q14061 63 aa11.21□□□□□ -0.61
RUNX1-208ENST00000455571 MRPL55Q7Z7F7 128 aaKnown RBP11.21□□□□□ -0.61
RUNX1-208ENST00000455571 TP73-AS1Q9UF72 201 aa11.21□□□□□ -0.61
RUNX1-208ENST00000455571 NKAPP1Q8N9T2 125 aa11.2□□□□□ -0.62
RUNX1-208ENST00000455571 PLA2G2DQ9UNK4 145 aa11.2□□□□□ -0.62
RUNX1-208ENST00000455571 PMCHL2Q9BQD1 86 aa11.19□□□□□ -0.62
RUNX1-208ENST00000455571 MAP1LC3CQ9BXW4 147 aa11.19□□□□□ -0.62
RUNX1-208ENST00000455571 DPM2O94777 84 aa11.18□□□□□ -0.62
RUNX1-208ENST00000455571 MT1HL1P0DM35 61 aa11.18□□□□□ -0.62
RUNX1-208ENST00000455571 SND1-IT1Q9HBX3 110 aa11.18□□□□□ -0.62
RUNX1-208ENST00000455571 LINC00158P58513 81 aa11.17□□□□□ -0.62
RUNX1-208ENST00000455571 LINC01600Q96MT4 127 aa11.17□□□□□ -0.62
RUNX1-208ENST00000455571 IGLV5-37A0A075B6J1 123 aa11.16□□□□□ -0.62
RUNX1-208ENST00000455571 GAGE10A6NGK3 116 aa11.16□□□□□ -0.62
RUNX1-208ENST00000455571 DIRC1Q969H9 104 aa11.16□□□□□ -0.62
RUNX1-208ENST00000455571 IGKCP01834 107 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms