RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 C9orf163Q8N9P6 203 aa11.51□□□□□ -0.57
COPS7A-202ENST00000455113 MAJINQ3KP22 176 aa11.5□□□□□ -0.57
COPS7A-202ENST00000455113 MALP21145 153 aa11.49□□□□□ -0.57
COPS7A-202ENST00000455113 IGHV3-64A0A075B6Q5 118 aa11.49□□□□□ -0.57
COPS7A-202ENST00000455113 SMIM1B2RUZ4 78 aa11.49□□□□□ -0.57
COPS7A-202ENST00000455113 CNBPP62633 177 aaKnown RBP11.49□□□□□ -0.57
COPS7A-202ENST00000455113 LINC01561Q8N1V8 128 aa11.49□□□□□ -0.57
COPS7A-202ENST00000455113 HERVK_113P61574 105 aa11.48□□□□□ -0.57
COPS7A-202ENST00000455113 SMIM6P0DI80 62 aa11.47□□□□□ -0.57
COPS7A-202ENST00000455113 SCXQ7RTU7 201 aa11.47□□□□□ -0.57
COPS7A-202ENST00000455113 HSBP1L1C9JCN9 74 aa11.46□□□□□ -0.57
COPS7A-202ENST00000455113 IGHV1-58A0A0C4DH39 117 aa11.46□□□□□ -0.58
COPS7A-202ENST00000455113 IGLV5-39A0A0G2JS06 123 aa11.46□□□□□ -0.58
COPS7A-202ENST00000455113 APOMO95445 188 aa11.46□□□□□ -0.58
COPS7A-202ENST00000455113 HIGD2BQ4VC39 106 aa11.46□□□□□ -0.58
COPS7A-202ENST00000455113 ANKRD39Q53RE8 183 aa11.46□□□□□ -0.58
COPS7A-202ENST00000455113 C15orf56Q8N910 161 aa11.46□□□□□ -0.58
COPS7A-202ENST00000455113 ORAOV1Q8WV07 137 aa11.45□□□□□ -0.58
COPS7A-202ENST00000455113 VAMP8Q9BV40 100 aa11.45□□□□□ -0.58
COPS7A-202ENST00000455113 E9PLD3 99 aa11.44□□□□□ -0.58
COPS7A-202ENST00000455113 PLA2G1BP04054 148 aaKnown RBP11.44□□□□□ -0.58
COPS7A-202ENST00000455113 INAFM2P0DMQ5 153 aa11.43□□□□□ -0.58
COPS7A-202ENST00000455113 CIRBP-AS1Q8TBR5 109 aa11.43□□□□□ -0.58
COPS7A-202ENST00000455113 PAM16Q9Y3D7 125 aa11.43□□□□□ -0.58
COPS7A-202ENST00000455113 GVQW2A0A096LPI5 108 aaPredicted RBP11.43□□□□□ -0.58
COPS7A-202ENST00000455113 IGKV2D-26A0A0A0MRZ7 120 aa11.43□□□□□ -0.58
COPS7A-202ENST00000455113 LEPROTO15243 131 aa11.43□□□□□ -0.58
COPS7A-202ENST00000455113 LINC00528Q8N1L1 170 aa11.43□□□□□ -0.58
COPS7A-202ENST00000455113 DPH3Q96FX2 82 aa11.43□□□□□ -0.58
COPS7A-202ENST00000455113 TOMM7Q9P0U1 55 aa11.43□□□□□ -0.58
COPS7A-202ENST00000455113 ABCA13Q86UQ4 5058 aa11.43□□□□□ -0.58
COPS7A-202ENST00000455113 ZNF561-AS1K7EIQ3 104 aa11.42□□□□□ -0.58
COPS7A-202ENST00000455113 SPATA45Q537H7 98 aa11.41□□□□□ -0.58
COPS7A-202ENST00000455113 SDIM1Q6ZPB5 146 aa11.41□□□□□ -0.58
COPS7A-202ENST00000455113 COX7B2Q8TF08 81 aa11.41□□□□□ -0.58
COPS7A-202ENST00000455113 PLEKHB2Q96CS7 222 aa11.41□□□□□ -0.58
COPS7A-202ENST00000455113 NMUP48645 174 aa11.4□□□□□ -0.58
COPS7A-202ENST00000455113 TSPEAR-AS2P59090 65 aa11.4□□□□□ -0.58
COPS7A-202ENST00000455113 S100A12P80511 92 aa11.4□□□□□ -0.58
COPS7A-202ENST00000455113 SPAG11BQ08648 103 aa11.4□□□□□ -0.58
COPS7A-202ENST00000455113 Q8IZM0 81 aa11.4□□□□□ -0.58
COPS7A-202ENST00000455113 J3QQQ9 107 aa11.4□□□□□ -0.58
COPS7A-202ENST00000455113 SLPIP03973 132 aa11.4□□□□□ -0.58
COPS7A-202ENST00000455113 PRSS2P07478 247 aa11.4□□□□□ -0.58
COPS7A-202ENST00000455113 KIAA0087Q14695 138 aa11.4□□□□□ -0.58
COPS7A-202ENST00000455113 LINC00526Q96FQ7 95 aa11.4□□□□□ -0.58
COPS7A-202ENST00000455113 C6orf226Q5I0X4 101 aa11.39□□□□□ -0.59
COPS7A-202ENST00000455113 C12orf57Q99622 126 aa11.39□□□□□ -0.59
COPS7A-202ENST00000455113 PKIGQ9Y2B9 76 aa11.39□□□□□ -0.59
COPS7A-202ENST00000455113 LGALS3P17931 250 aaKnown RBP11.38□□□□□ -0.59
COPS7A-202ENST00000455113 TTTY13Q9BZ97 58 aa11.38□□□□□ -0.59
COPS7A-202ENST00000455113 LINC00518Q8N0U6 118 aa11.37□□□□□ -0.59
COPS7A-202ENST00000455113 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.37□□□□□ -0.59
COPS7A-202ENST00000455113 PCP2Q8IVA1 136 aa11.36□□□□□ -0.59
COPS7A-202ENST00000455113 CKS1BP61024 79 aa11.35□□□□□ -0.59
COPS7A-202ENST00000455113 C2orf82Q6UX34 121 aa11.35□□□□□ -0.59
COPS7A-202ENST00000455113 CARD19Q96LW7 228 aa11.35□□□□□ -0.59
COPS7A-202ENST00000455113 NDUFA12Q9UI09 145 aa11.35□□□□□ -0.59
COPS7A-202ENST00000455113 DNAH8Q96JB1 4490 aa11.34□□□□□ -0.59
COPS7A-202ENST00000455113 ZNF625Q96I27 306 aaPredicted RBP11.34□□□□□ -0.59
COPS7A-202ENST00000455113 C2orf48Q96LS8 159 aa11.34□□□□□ -0.59
COPS7A-202ENST00000455113 NDUFA1O15239 70 aa11.33□□□□□ -0.6
COPS7A-202ENST00000455113 CXCL5P42830 114 aa11.33□□□□□ -0.6
COPS7A-202ENST00000455113 SYCNQ0VAF6 134 aa11.33□□□□□ -0.6
COPS7A-202ENST00000455113 C14orf144Q96I85 54 aa11.33□□□□□ -0.6
COPS7A-202ENST00000455113 CAMK2N2Q96S95 79 aa11.33□□□□□ -0.6
COPS7A-202ENST00000455113 FAT1Q14517 4588 aa11.33□□□□□ -0.6
COPS7A-202ENST00000455113 ZNF815PA8K554 130 aa11.32□□□□□ -0.6
COPS7A-202ENST00000455113 COX8AP10176 69 aa11.32□□□□□ -0.6
COPS7A-202ENST00000455113 CIRBPQ14011 172 aaKnown RBP11.32□□□□□ -0.6
COPS7A-202ENST00000455113 MYMXA0A1B0GTQ4 84 aa11.32□□□□□ -0.6
COPS7A-202ENST00000455113 PANO1I0J062 215 aa11.32□□□□□ -0.6
COPS7A-202ENST00000455113 UNQ6190/PRO20217Q6UXQ8 127 aa11.32□□□□□ -0.6
COPS7A-202ENST00000455113 LINC00474Q9P2X8 69 aa11.32□□□□□ -0.6
COPS7A-202ENST00000455113 IGKV2-24A0A0C4DH68 120 aa11.31□□□□□ -0.6
COPS7A-202ENST00000455113 CHTF8P0CG12 524 aa11.31□□□□□ -0.6
COPS7A-202ENST00000455113 C10orf25Q5T742 122 aa11.31□□□□□ -0.6
COPS7A-202ENST00000455113 SPACA4Q8TDM5 124 aa11.31□□□□□ -0.6
COPS7A-202ENST00000455113 TP73-AS1Q9UF72 201 aa11.31□□□□□ -0.6
COPS7A-202ENST00000455113 F8WDY8 70 aa11.3□□□□□ -0.6
COPS7A-202ENST00000455113 SFTA2Q6UW10 78 aa11.3□□□□□ -0.6
COPS7A-202ENST00000455113 A0A087WYN8 130 aa11.29□□□□□ -0.6
COPS7A-202ENST00000455113 RPL37AP61513 92 aaKnown RBP11.29□□□□□ -0.6
COPS7A-202ENST00000455113 Q6ZRU5 148 aa11.29□□□□□ -0.6
COPS7A-202ENST00000455113 BOD1L2Q8IYS8 172 aa11.29□□□□□ -0.6
COPS7A-202ENST00000455113 HERV-K104P63124 156 aa11.29□□□□□ -0.6
COPS7A-202ENST00000455113 SLC25A34Q6PIV7 304 aa11.28□□□□□ -0.6
COPS7A-202ENST00000455113 PRO1933Q9H354 126 aa11.28□□□□□ -0.6
COPS7A-202ENST00000455113 C6orf48Q9UBA6 75 aa11.27□□□□□ -0.61
COPS7A-202ENST00000455113 A0A0J9YXY3 114 aa11.26□□□□□ -0.61
COPS7A-202ENST00000455113 DLEU1O43261 78 aa11.26□□□□□ -0.61
COPS7A-202ENST00000455113 A0A096LNI7 61 aa11.26□□□□□ -0.61
COPS7A-202ENST00000455113 TRBV30A0A0K0K1B3 111 aa11.26□□□□□ -0.61
COPS7A-202ENST00000455113 LOC107984640A0A0U1RRK4 108 aa11.26□□□□□ -0.61
COPS7A-202ENST00000455113 C9orf116Q5BN46 136 aaPredicted RBP11.26□□□□□ -0.61
COPS7A-202ENST00000455113 SCGB1D4Q6XE38 83 aa11.26□□□□□ -0.61
COPS7A-202ENST00000455113 C7orf33Q8WU49 177 aa11.26□□□□□ -0.61
COPS7A-202ENST00000455113 PLAC8Q9NZF1 115 aa11.25□□□□□ -0.61
COPS7A-202ENST00000455113 SRRM2Q9UQ35 2752 aaKnown RBP11.25□□□□□ -0.61
COPS7A-202ENST00000455113 MEIG1Q5JSS6 88 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms