RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 SLC51BQ86UW2 128 aa9.7□□□□□ -0.86
UBE2D4-209ENST00000454428 ALKBH7Q9BT30 221 aaPredicted RBP9.7□□□□□ -0.86
UBE2D4-209ENST00000454428 IGLV5-37A0A075B6J1 123 aa9.69□□□□□ -0.86
UBE2D4-209ENST00000454428 F8VRH5 84 aa9.69□□□□□ -0.86
UBE2D4-209ENST00000454428 LINC00337Q8N6G1 96 aa9.69□□□□□ -0.86
UBE2D4-209ENST00000454428 PRLHP81277 87 aa9.68□□□□□ -0.86
UBE2D4-209ENST00000454428 KRTAP19-2Q3LHN2 52 aa9.68□□□□□ -0.86
UBE2D4-209ENST00000454428 AMELXQ99217 191 aa9.68□□□□□ -0.86
UBE2D4-209ENST00000454428 SMIM27A0A1W2PRY6 76 aa9.67□□□□□ -0.86
UBE2D4-209ENST00000454428 SCO1O75880 301 aa9.67□□□□□ -0.86
UBE2D4-209ENST00000454428 FAM19A3Q7Z5A8 133 aa9.67□□□□□ -0.86
UBE2D4-209ENST00000454428 BATF3Q9NR55 127 aa9.67□□□□□ -0.86
UBE2D4-209ENST00000454428 IGKV2-28A0A075B6P5 120 aa9.65□□□□□ -0.86
UBE2D4-209ENST00000454428 IGKV2D-28P01615 120 aa9.65□□□□□ -0.86
UBE2D4-209ENST00000454428 SEC61BP60468 96 aaKnown RBP9.65□□□□□ -0.86
UBE2D4-209ENST00000454428 C2orf66Q6UXQ4 117 aa9.65□□□□□ -0.86
UBE2D4-209ENST00000454428 C2orf88Q9BSF0 95 aa9.65□□□□□ -0.86
UBE2D4-209ENST00000454428 CDKN2A-AS1Q9UH64 79 aa9.65□□□□□ -0.86
UBE2D4-209ENST00000454428 A0A1B0GW15 77 aa9.64□□□□□ -0.87
UBE2D4-209ENST00000454428 RAB5AP20339 215 aa9.64□□□□□ -0.87
UBE2D4-209ENST00000454428 MT1HP80294 61 aa9.64□□□□□ -0.87
UBE2D4-209ENST00000454428 SPAG11AQ6PDA7 123 aa9.64□□□□□ -0.87
UBE2D4-209ENST00000454428 PLEKHB2Q96CS7 222 aa9.64□□□□□ -0.87
UBE2D4-209ENST00000454428 A0A1B0GXF2 115 aa9.63□□□□□ -0.87
UBE2D4-209ENST00000454428 SRP19P09132 144 aaKnown RBP9.63□□□□□ -0.87
UBE2D4-209ENST00000454428 PPBPP02775 128 aa9.62□□□□□ -0.87
UBE2D4-209ENST00000454428 RPL23P62829 140 aaKnown RBP9.62□□□□□ -0.87
UBE2D4-209ENST00000454428 MRPL54Q6P161 138 aaKnown RBP9.62□□□□□ -0.87
UBE2D4-209ENST00000454428 TMEM238C9JI98 176 aa9.61□□□□□ -0.87
UBE2D4-209ENST00000454428 BLOC1S1P78537 153 aa9.61□□□□□ -0.87
UBE2D4-209ENST00000454428 VCX2Q9H322 139 aa9.61□□□□□ -0.87
UBE2D4-209ENST00000454428 IGIPA6NJ69 53 aa9.6□□□□□ -0.87
UBE2D4-209ENST00000454428 PRSS47A8MTI9 375 aa9.6□□□□□ -0.87
UBE2D4-209ENST00000454428 CXCL5P42830 114 aa9.6□□□□□ -0.87
UBE2D4-209ENST00000454428 ALKAL2Q6UX46 152 aa9.6□□□□□ -0.87
UBE2D4-209ENST00000454428 FAM19A1Q7Z5A9 133 aa9.6□□□□□ -0.87
UBE2D4-209ENST00000454428 NKAPP1Q8N9T2 125 aa9.6□□□□□ -0.87
UBE2D4-209ENST00000454428 TMEM126AQ9H061 195 aa9.6□□□□□ -0.87
UBE2D4-209ENST00000454428 F8W036 122 aa9.59□□□□□ -0.87
UBE2D4-209ENST00000454428 ORMDL3Q8N138 153 aa9.59□□□□□ -0.87
UBE2D4-209ENST00000454428 PRELID3AQ96N28 172 aa9.59□□□□□ -0.87
UBE2D4-209ENST00000454428 CYSLTR1Q9Y271 337 aa9.59□□□□□ -0.87
UBE2D4-209ENST00000454428 SMIM1B2RUZ4 78 aa9.58□□□□□ -0.88
UBE2D4-209ENST00000454428 M0R378 163 aa9.58□□□□□ -0.88
UBE2D4-209ENST00000454428 LORP23490 312 aaPredicted RBP9.58□□□□□ -0.88
UBE2D4-209ENST00000454428 HERVK_113P63121 156 aa9.58□□□□□ -0.88
UBE2D4-209ENST00000454428 TMEM136Q6ZRR5 245 aa9.58□□□□□ -0.88
UBE2D4-209ENST00000454428 LOC389332A0A1B0GUA5 103 aa9.57□□□□□ -0.88
UBE2D4-209ENST00000454428 NPSP0C0P6 89 aa9.57□□□□□ -0.88
UBE2D4-209ENST00000454428 RAB5BP61020 215 aa9.57□□□□□ -0.88
UBE2D4-209ENST00000454428 ADIRFQ15847 76 aa9.56□□□□□ -0.88
UBE2D4-209ENST00000454428 TCTE3Q8IZS6 198 aa9.56□□□□□ -0.88
UBE2D4-209ENST00000454428 DAND5Q8N907 189 aa9.56□□□□□ -0.88
UBE2D4-209ENST00000454428 S100A8P05109 93 aa9.55□□□□□ -0.88
UBE2D4-209ENST00000454428 XP32Q5T750 250 aa9.55□□□□□ -0.88
UBE2D4-209ENST00000454428 Q8NBF4 154 aa9.55□□□□□ -0.88
UBE2D4-209ENST00000454428 COX7B2Q8TF08 81 aa9.55□□□□□ -0.88
UBE2D4-209ENST00000454428 SPRR4Q96PI1 79 aa9.55□□□□□ -0.88
UBE2D4-209ENST00000454428 FLGP20930 4061 aaPredicted RBP9.54□□□□□ -0.88
UBE2D4-209ENST00000454428 KRTAP10-6P60371 365 aaPredicted RBP9.54□□□□□ -0.88
UBE2D4-209ENST00000454428 CBLN2Q8IUK8 224 aa9.54□□□□□ -0.88
UBE2D4-209ENST00000454428 CFC1BP0CG36 223 aa9.53□□□□□ -0.88
UBE2D4-209ENST00000454428 VPREB1P12018 145 aa9.53□□□□□ -0.88
UBE2D4-209ENST00000454428 SEC11AP67812 179 aa9.53□□□□□ -0.88
UBE2D4-209ENST00000454428 Q8N8P6 123 aa9.53□□□□□ -0.88
UBE2D4-209ENST00000454428 GEMIN7Q9H840 131 aaKnown RBP9.53□□□□□ -0.88
UBE2D4-209ENST00000454428 C9JQL5 133 aa9.52□□□□□ -0.89
UBE2D4-209ENST00000454428 C4orf48Q5BLP8 95 aa9.52□□□□□ -0.89
UBE2D4-209ENST00000454428 PDZD11Q5EBL8 140 aa9.52□□□□□ -0.89
UBE2D4-209ENST00000454428 Q8NDZ9 215 aa9.52□□□□□ -0.89
UBE2D4-209ENST00000454428 HIGD2AQ9BW72 106 aa9.51□□□□□ -0.89
UBE2D4-209ENST00000454428 GNB1LQ9BYB4 327 aa9.51□□□□□ -0.89
UBE2D4-209ENST00000454428 MAP1LC3AQ9H492 121 aa9.51□□□□□ -0.89
UBE2D4-209ENST00000454428 NAT8Q9UHE5 227 aa9.51□□□□□ -0.89
UBE2D4-209ENST00000454428 KRTAP9-7A8MTY7 169 aa9.5□□□□□ -0.89
UBE2D4-209ENST00000454428 LAMTOR2Q9Y2Q5 125 aa9.5□□□□□ -0.89
UBE2D4-209ENST00000454428 IGLV5-45A0A087WSX0 123 aa9.49□□□□□ -0.89
UBE2D4-209ENST00000454428 SPINK1P00995 79 aa9.49□□□□□ -0.89
UBE2D4-209ENST00000454428 ORMDL2Q53FV1 153 aa9.49□□□□□ -0.89
UBE2D4-209ENST00000454428 ATP5L2Q7Z4Y8 100 aa9.47□□□□□ -0.89
UBE2D4-209ENST00000454428 Q8N377 158 aa9.47□□□□□ -0.89
UBE2D4-209ENST00000454428 TIMM17AQ99595 171 aa9.47□□□□□ -0.89
UBE2D4-209ENST00000454428 SND1-IT1Q9HBX3 110 aa9.47□□□□□ -0.89
UBE2D4-209ENST00000454428 TINCRA0A1B0GVN0 87 aa9.46□□□□□ -0.9
UBE2D4-209ENST00000454428 SPINK8P0C7L1 97 aa9.46□□□□□ -0.9
UBE2D4-209ENST00000454428 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.45□□□□□ -0.9
UBE2D4-209ENST00000454428 PFN2P35080 140 aa9.45□□□□□ -0.9
UBE2D4-209ENST00000454428 PAPPA-AS1Q5QFB9 102 aa9.45□□□□□ -0.9
UBE2D4-209ENST00000454428 TOMM6Q96B49 74 aa9.45□□□□□ -0.9
UBE2D4-209ENST00000454428 A0A1B0GVG6 124 aa9.44□□□□□ -0.9
UBE2D4-209ENST00000454428 K7EMI3 77 aa9.44□□□□□ -0.9
UBE2D4-209ENST00000454428 SSPOA2VEC9 5147 aa9.43□□□□□ -0.9
UBE2D4-209ENST00000454428 ADCYAP1P18509 176 aa9.42□□□□□ -0.9
UBE2D4-209ENST00000454428 ATP5LO75964 103 aa9.41□□□□□ -0.9
UBE2D4-209ENST00000454428 RAB14P61106 215 aa9.41□□□□□ -0.9
UBE2D4-209ENST00000454428 RPS29P62273 56 aaKnown RBP9.41□□□□□ -0.9
UBE2D4-209ENST00000454428 RPL24P83731 157 aaKnown RBP9.41□□□□□ -0.9
UBE2D4-209ENST00000454428 NDUFA12Q9UI09 145 aa9.41□□□□□ -0.9
UBE2D4-209ENST00000454428 ZNF706Q9Y5V0 76 aaPredicted RBP9.41□□□□□ -0.9
UBE2D4-209ENST00000454428 ERASQ7Z444 233 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms