RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 C6orf226Q5I0X4 101 aa10.06□□□□□ -0.8
NCKIPSD-208ENST00000454134 C9orf129Q5T035 196 aaKnown RBP10.06□□□□□ -0.8
NCKIPSD-208ENST00000454134 M0QXV9 152 aa10.05□□□□□ -0.8
NCKIPSD-208ENST00000454134 ERASQ7Z444 233 aa10.05□□□□□ -0.8
NCKIPSD-208ENST00000454134 Q8IZM0 81 aa10.05□□□□□ -0.8
NCKIPSD-208ENST00000454134 IGLV7-43P04211 117 aa10.04□□□□□ -0.8
NCKIPSD-208ENST00000454134 SEC11AP67812 179 aa10.04□□□□□ -0.8
NCKIPSD-208ENST00000454134 LINC00469Q8N7U9 141 aa10.04□□□□□ -0.8
NCKIPSD-208ENST00000454134 C10orf91Q5T1B1 145 aa10.03□□□□□ -0.8
NCKIPSD-208ENST00000454134 MRPL18Q9H0U6 180 aaKnown RBP10.03□□□□□ -0.8
NCKIPSD-208ENST00000454134 RPS10P5Q9NQ39 176 aa10.03□□□□□ -0.8
NCKIPSD-208ENST00000454134 LINC01546A6NGU7 62 aa10.02□□□□□ -0.81
NCKIPSD-208ENST00000454134 UBE2BP63146 152 aa10.02□□□□□ -0.81
NCKIPSD-208ENST00000454134 FABP9Q0Z7S8 132 aa10.02□□□□□ -0.81
NCKIPSD-208ENST00000454134 FA2HQ7L5A8 372 aa10.01□□□□□ -0.81
NCKIPSD-208ENST00000454134 XAGE1AQ9HD64 81 aa10.01□□□□□ -0.81
NCKIPSD-208ENST00000454134 CARHSP1Q9Y2V2 147 aaKnown RBP10.01□□□□□ -0.81
NCKIPSD-208ENST00000454134 RHEBQ15382 184 aa10□□□□□ -0.81
NCKIPSD-208ENST00000454134 COX19Q49B96 90 aa10□□□□□ -0.81
NCKIPSD-208ENST00000454134 DIRC1Q969H9 104 aa10□□□□□ -0.81
NCKIPSD-208ENST00000454134 CST9LQ9H4G1 147 aa10□□□□□ -0.81
NCKIPSD-208ENST00000454134 UBR4Q5T4S7 5183 aa9.99□□□□□ -0.81
NCKIPSD-208ENST00000454134 TINCRA0A1B0GVN0 87 aa9.99□□□□□ -0.81
NCKIPSD-208ENST00000454134 SMIM1B2RUZ4 78 aa9.99□□□□□ -0.81
NCKIPSD-208ENST00000454134 F8VRH5 84 aa9.99□□□□□ -0.81
NCKIPSD-208ENST00000454134 SMCO4Q9NRQ5 59 aa9.99□□□□□ -0.81
NCKIPSD-208ENST00000454134 LINC01549A6NIU2 74 aa9.97□□□□□ -0.81
NCKIPSD-208ENST00000454134 H0Y9J4 135 aa9.97□□□□□ -0.81
NCKIPSD-208ENST00000454134 PMVKQ15126 192 aa9.97□□□□□ -0.81
NCKIPSD-208ENST00000454134 IGLV5-45A0A087WSX0 123 aa9.96□□□□□ -0.82
NCKIPSD-208ENST00000454134 SPINK8P0C7L1 97 aa9.96□□□□□ -0.82
NCKIPSD-208ENST00000454134 PDZD11Q5EBL8 140 aa9.96□□□□□ -0.82
NCKIPSD-208ENST00000454134 PRR26Q8N8Z3 221 aa9.96□□□□□ -0.82
NCKIPSD-208ENST00000454134 COX7B2Q8TF08 81 aa9.96□□□□□ -0.82
NCKIPSD-208ENST00000454134 C22orf24Q9Y442 160 aa9.96□□□□□ -0.82
NCKIPSD-208ENST00000454134 CXCL5P42830 114 aa9.95□□□□□ -0.82
NCKIPSD-208ENST00000454134 A0A096LNJ9 63 aa9.94□□□□□ -0.82
NCKIPSD-208ENST00000454134 URB1-AS1Q96HZ7 61 aa9.94□□□□□ -0.82
NCKIPSD-208ENST00000454134 TRAPPC1Q9Y5R8 145 aa9.94□□□□□ -0.82
NCKIPSD-208ENST00000454134 APOC3P02656 99 aa9.93□□□□□ -0.82
NCKIPSD-208ENST00000454134 NDUFA6P56556 154 aa9.93□□□□□ -0.82
NCKIPSD-208ENST00000454134 C18orf32Q8TCD1 76 aa9.93□□□□□ -0.82
NCKIPSD-208ENST00000454134 RAB5BP61020 215 aa9.92□□□□□ -0.82
NCKIPSD-208ENST00000454134 PMCHL1Q16048 86 aa9.92□□□□□ -0.82
NCKIPSD-208ENST00000454134 LINC00614P0C842 121 aa9.91□□□□□ -0.82
NCKIPSD-208ENST00000454134 LBHQ53QV2 105 aaPredicted RBP9.91□□□□□ -0.82
NCKIPSD-208ENST00000454134 KRTAP1-4P0C5Y4 121 aa9.9□□□□□ -0.82
NCKIPSD-208ENST00000454134 MRPL55Q7Z7F7 128 aaKnown RBP9.9□□□□□ -0.82
NCKIPSD-208ENST00000454134 H3BRM9 83 aa9.89□□□□□ -0.83
NCKIPSD-208ENST00000454134 IGLC3P0DOY3 106 aa9.89□□□□□ -0.83
NCKIPSD-208ENST00000454134 LRP2P98164 4655 aa9.88□□□□□ -0.83
NCKIPSD-208ENST00000454134 HBDP02042 147 aa9.88□□□□□ -0.83
NCKIPSD-208ENST00000454134 TP73-AS1Q9UF72 201 aa9.88□□□□□ -0.83
NCKIPSD-208ENST00000454134 GAGE10A6NGK3 116 aa9.87□□□□□ -0.83
NCKIPSD-208ENST00000454134 RPL37AP8A6NKH3 93 aa9.87□□□□□ -0.83
NCKIPSD-208ENST00000454134 NUPR1O60356 82 aa9.87□□□□□ -0.83
NCKIPSD-208ENST00000454134 ZNF861PO60384 105 aa9.87□□□□□ -0.83
NCKIPSD-208ENST00000454134 SNAPINO95295 136 aa9.87□□□□□ -0.83
NCKIPSD-208ENST00000454134 ZNF22P17026 224 aaPredicted RBP9.87□□□□□ -0.83
NCKIPSD-208ENST00000454134 SVBPQ8N300 66 aa9.87□□□□□ -0.83
NCKIPSD-208ENST00000454134 ATP5LO75964 103 aa9.86□□□□□ -0.83
NCKIPSD-208ENST00000454134 NDUFA5Q16718 116 aa9.86□□□□□ -0.83
NCKIPSD-208ENST00000454134 LINC00167Q96N53 147 aa9.86□□□□□ -0.83
NCKIPSD-208ENST00000454134 IGLV1-50A0A075B6I6 118 aa9.85□□□□□ -0.83
NCKIPSD-208ENST00000454134 IGLV5-39A0A0G2JS06 123 aa9.85□□□□□ -0.83
NCKIPSD-208ENST00000454134 PFN2P35080 140 aa9.85□□□□□ -0.83
NCKIPSD-208ENST00000454134 BAGE3Q86Y29 109 aa9.84□□□□□ -0.83
NCKIPSD-208ENST00000454134 C11orf86A6NJI1 115 aa9.83□□□□□ -0.84
NCKIPSD-208ENST00000454134 BCE1O60756 84 aa9.83□□□□□ -0.84
NCKIPSD-208ENST00000454134 SCO1O75880 301 aa9.83□□□□□ -0.84
NCKIPSD-208ENST00000454134 YPEL4Q96NS1 127 aa9.83□□□□□ -0.84
NCKIPSD-208ENST00000454134 NKAPP1Q8N9T2 125 aa9.82□□□□□ -0.84
NCKIPSD-208ENST00000454134 ZNF625Q96I27 306 aaPredicted RBP9.82□□□□□ -0.84
NCKIPSD-208ENST00000454134 IGLV5-37A0A075B6J1 123 aa9.81□□□□□ -0.84
NCKIPSD-208ENST00000454134 RPL28P46779 137 aaKnown RBP9.81□□□□□ -0.84
NCKIPSD-208ENST00000454134 TMEM170BQ5T4T1 132 aa9.81□□□□□ -0.84
NCKIPSD-208ENST00000454134 SND1-IT1Q9HBX3 110 aa9.8□□□□□ -0.84
NCKIPSD-208ENST00000454134 ERG28Q9UKR5 140 aa9.8□□□□□ -0.84
NCKIPSD-208ENST00000454134 RPL13AP40429 203 aaKnown RBP9.79□□□□□ -0.84
NCKIPSD-208ENST00000454134 CHTOPQ9Y3Y2 248 aaKnown RBP9.79□□□□□ -0.84
NCKIPSD-208ENST00000454134 IGKV2-28A0A075B6P5 120 aa9.78□□□□□ -0.84
NCKIPSD-208ENST00000454134 IGKV2D-28P01615 120 aa9.78□□□□□ -0.84
NCKIPSD-208ENST00000454134 CBLN2Q8IUK8 224 aa9.77□□□□□ -0.85
NCKIPSD-208ENST00000454134 VPREB1P12018 145 aa9.76□□□□□ -0.85
NCKIPSD-208ENST00000454134 IFI27L1Q96BM0 104 aa9.76□□□□□ -0.85
NCKIPSD-208ENST00000454134 CHCHD1Q96BP2 118 aaKnown RBP9.76□□□□□ -0.85
NCKIPSD-208ENST00000454134 A0A087X002 238 aa9.75□□□□□ -0.85
NCKIPSD-208ENST00000454134 UBE2AP49459 152 aa9.75□□□□□ -0.85
NCKIPSD-208ENST00000454134 COX17Q14061 63 aa9.75□□□□□ -0.85
NCKIPSD-208ENST00000454134 Q8NDZ9 215 aa9.75□□□□□ -0.85
NCKIPSD-208ENST00000454134 KRTAP13-1Q8IUC0 172 aa9.74□□□□□ -0.85
NCKIPSD-208ENST00000454134 ANAPC11Q9NYG5 84 aa9.74□□□□□ -0.85
NCKIPSD-208ENST00000454134 TRAV12-1A0A0B4J245 112 aa9.73□□□□□ -0.85
NCKIPSD-208ENST00000454134 TMEM223A0PJW6 202 aa9.73□□□□□ -0.85
NCKIPSD-208ENST00000454134 FAM19A2Q8N3H0 131 aa9.73□□□□□ -0.85
NCKIPSD-208ENST00000454134 A0A0U1RRA0 63 aa9.72□□□□□ -0.85
NCKIPSD-208ENST00000454134 TMEM238C9JI98 176 aa9.72□□□□□ -0.85
NCKIPSD-208ENST00000454134 LINC00158P58513 81 aa9.72□□□□□ -0.85
NCKIPSD-208ENST00000454134 RPL24P83731 157 aaKnown RBP9.72□□□□□ -0.85
NCKIPSD-208ENST00000454134 SFTA2Q6UW10 78 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms