RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 C9JAW5 83 aa8.1□□□□□ -1.11
VTA1-203ENST00000452973 C2orf82Q6UX34 121 aa8.1□□□□□ -1.11
VTA1-203ENST00000452973 REG3AQ06141 175 aa8.1□□□□□ -1.11
VTA1-203ENST00000452973 CLEC2BQ92478 149 aa8.1□□□□□ -1.11
VTA1-203ENST00000452973 Q6ZTC4 211 aa8.09□□□□□ -1.11
VTA1-203ENST00000452973 CHCHD10Q8WYQ3 142 aaPredicted RBP8.09□□□□□ -1.11
VTA1-203ENST00000452973 KLK12Q9UKR0 248 aa8.09□□□□□ -1.11
VTA1-203ENST00000452973 MGAM2Q2M2H8 2515 aa8.08□□□□□ -1.12
VTA1-203ENST00000452973 MALP21145 153 aa8.08□□□□□ -1.12
VTA1-203ENST00000452973 COX6CP09669 75 aa8.08□□□□□ -1.12
VTA1-203ENST00000452973 A0A0J9YWU9 116 aa8.07□□□□□ -1.12
VTA1-203ENST00000452973 TRBV30A0A0K0K1B3 111 aa8.07□□□□□ -1.12
VTA1-203ENST00000452973 EGFEM1PQ0D2K5 195 aa8.07□□□□□ -1.12
VTA1-203ENST00000452973 SLC25A20O43772 301 aa8.06□□□□□ -1.12
VTA1-203ENST00000452973 CKS1BP61024 79 aa8.06□□□□□ -1.12
VTA1-203ENST00000452973 ATXN8Q156A1 80 aa8.06□□□□□ -1.12
VTA1-203ENST00000452973 LELP1Q5T871 98 aa8.06□□□□□ -1.12
VTA1-203ENST00000452973 COX7A2LO14548 114 aa8.06□□□□□ -1.12
VTA1-203ENST00000452973 NANOS2P60321 138 aaKnown RBP8.06□□□□□ -1.12
VTA1-203ENST00000452973 MRAPQ8TCY5 172 aa8.06□□□□□ -1.12
VTA1-203ENST00000452973 COPS9Q8WXC6 57 aa8.06□□□□□ -1.12
VTA1-203ENST00000452973 KPRPQ5T749 579 aaPredicted RBP8.06□□□□□ -1.12
VTA1-203ENST00000452973 LINC00526Q96FQ7 95 aa8.06□□□□□ -1.12
VTA1-203ENST00000452973 SND1-IT1Q9HBX3 110 aa8.06□□□□□ -1.12
VTA1-203ENST00000452973 CD164L2Q6UWJ8 174 aa8.05□□□□□ -1.12
VTA1-203ENST00000452973 LYPD5Q6UWN5 251 aa8.05□□□□□ -1.12
VTA1-203ENST00000452973 LINC01620Q4KN68 170 aa8.05□□□□□ -1.12
VTA1-203ENST00000452973 DEFB121Q5J5C9 76 aa8.04□□□□□ -1.12
VTA1-203ENST00000452973 J3QR89 54 aa8.04□□□□□ -1.12
VTA1-203ENST00000452973 ANKRD29Q8N6D5 301 aa8.04□□□□□ -1.12
VTA1-203ENST00000452973 CCL18P55774 89 aa8.04□□□□□ -1.12
VTA1-203ENST00000452973 UBE2WQ96B02 151 aa8.04□□□□□ -1.12
VTA1-203ENST00000452973 GAGE12HA6NDE8 117 aa8.03□□□□□ -1.12
VTA1-203ENST00000452973 C9orf116Q5BN46 136 aaPredicted RBP8.03□□□□□ -1.12
VTA1-203ENST00000452973 WFDC10BQ8IUB3 73 aa8.03□□□□□ -1.12
VTA1-203ENST00000452973 IBA57-AS1B1ANH7 110 aa8.03□□□□□ -1.12
VTA1-203ENST00000452973 FOXI1Q12951 378 aa8.03□□□□□ -1.12
VTA1-203ENST00000452973 TEN1Q86WV5 123 aa8.02□□□□□ -1.13
VTA1-203ENST00000452973 Q8IZM0 81 aa8.02□□□□□ -1.13
VTA1-203ENST00000452973 CRPP02741 224 aa8.02□□□□□ -1.13
VTA1-203ENST00000452973 LINC00337Q8N6G1 96 aa8.02□□□□□ -1.13
VTA1-203ENST00000452973 OR13C6PQ8NH95 151 aa8.02□□□□□ -1.13
VTA1-203ENST00000452973 C6orf223Q8N319 242 aa8.02□□□□□ -1.13
VTA1-203ENST00000452973 C11orf45Q8TAV5 145 aa8.02□□□□□ -1.13
VTA1-203ENST00000452973 CMYA5Q8N3K9 4069 aa8.01□□□□□ -1.13
VTA1-203ENST00000452973 IGKV2-28A0A075B6P5 120 aa8.01□□□□□ -1.13
VTA1-203ENST00000452973 DEFB131BA0A096LNP1 70 aa8.01□□□□□ -1.13
VTA1-203ENST00000452973 IGKV2D-28P01615 120 aa8.01□□□□□ -1.13
VTA1-203ENST00000452973 CARD19Q96LW7 228 aa8.01□□□□□ -1.13
VTA1-203ENST00000452973 ENHOQ6UWT2 76 aa8□□□□□ -1.13
VTA1-203ENST00000452973 NTN5Q8WTR8 489 aaPredicted RBP8□□□□□ -1.13
VTA1-203ENST00000452973 A0A1B0GV72 72 aa8□□□□□ -1.13
VTA1-203ENST00000452973 PRR3P79522 188 aaKnown RBP8□□□□□ -1.13
VTA1-203ENST00000452973 KIAA0087Q14695 138 aa7.99□□□□□ -1.13
VTA1-203ENST00000452973 PPDPFLQ8WWR9 84 aa7.99□□□□□ -1.13
VTA1-203ENST00000452973 TRAV13-2A0A0B4J235 113 aa7.99□□□□□ -1.13
VTA1-203ENST00000452973 LST1O00453 97 aa7.99□□□□□ -1.13
VTA1-203ENST00000452973 ESRGQ1W209 222 aa7.98□□□□□ -1.13
VTA1-203ENST00000452973 UNQ6190/PRO20217Q6UXQ8 127 aa7.98□□□□□ -1.13
VTA1-203ENST00000452973 TRBV10-2A0A0K0K1G8 114 aa7.98□□□□□ -1.13
VTA1-203ENST00000452973 TEX49A0A1B0GTD5 131 aa7.98□□□□□ -1.13
VTA1-203ENST00000452973 SPAG11BQ08648 103 aa7.98□□□□□ -1.13
VTA1-203ENST00000452973 C10orf25Q5T742 122 aa7.98□□□□□ -1.13
VTA1-203ENST00000452973 PRR34Q9NV39 138 aa7.97□□□□□ -1.13
VTA1-203ENST00000452973 SMIM11BQ8TCY0 68 aa7.96□□□□□ -1.14
VTA1-203ENST00000452973 FAM218AQ96MZ4 157 aa7.96□□□□□ -1.14
VTA1-203ENST00000452973 HIGD2BQ4VC39 106 aa7.95□□□□□ -1.14
VTA1-203ENST00000452973 LINC01561Q8N1V8 128 aa7.95□□□□□ -1.14
VTA1-203ENST00000452973 Q9HAA7 133 aa7.95□□□□□ -1.14
VTA1-203ENST00000452973 K7EIL1 84 aa7.94□□□□□ -1.14
VTA1-203ENST00000452973 H3BNG1 76 aa7.94□□□□□ -1.14
VTA1-203ENST00000452973 CXCL5P42830 114 aa7.94□□□□□ -1.14
VTA1-203ENST00000452973 TRAV8-4A0A0B4J246 113 aa7.94□□□□□ -1.14
VTA1-203ENST00000452973 SS18L2Q9UHA2 77 aa7.94□□□□□ -1.14
VTA1-203ENST00000452973 RPL28P46779 137 aaKnown RBP7.93□□□□□ -1.14
VTA1-203ENST00000452973 SPATA25Q9BR10 227 aa7.93□□□□□ -1.14
VTA1-203ENST00000452973 KLK5Q9Y337 293 aaPredicted RBP7.93□□□□□ -1.14
VTA1-203ENST00000452973 NCR3O14931 201 aa7.92□□□□□ -1.14
VTA1-203ENST00000452973 SIGMAR1Q99720 223 aa7.92□□□□□ -1.14
VTA1-203ENST00000452973 IGKV2D-24A0A075B6R9 120 aa7.91□□□□□ -1.14
VTA1-203ENST00000452973 H3BT86 120 aa7.91□□□□□ -1.14
VTA1-203ENST00000452973 A0A087WYN8 130 aa7.91□□□□□ -1.14
VTA1-203ENST00000452973 ZNF561-AS1K7EIQ3 104 aa7.91□□□□□ -1.14
VTA1-203ENST00000452973 PPDPFQ9H3Y8 114 aa7.91□□□□□ -1.14
VTA1-203ENST00000452973 COX17Q14061 63 aa7.9□□□□□ -1.14
VTA1-203ENST00000452973 Q8NDZ9 215 aa7.9□□□□□ -1.14
VTA1-203ENST00000452973 XAGE1AQ9HD64 81 aa7.9□□□□□ -1.14
VTA1-203ENST00000452973 STAB2Q8WWQ8 2551 aa7.9□□□□□ -1.14
VTA1-203ENST00000452973 BAALC-AS2P0C853 105 aa7.9□□□□□ -1.14
VTA1-203ENST00000452973 MDFIQ99750 246 aa7.89□□□□□ -1.15
VTA1-203ENST00000452973 CDIP1Q9H305 208 aa7.89□□□□□ -1.15
VTA1-203ENST00000452973 M0QXV9 152 aa7.89□□□□□ -1.15
VTA1-203ENST00000452973 C1orf43Q9BWL3 253 aa7.89□□□□□ -1.15
VTA1-203ENST00000452973 DNAL4O96015 105 aa7.89□□□□□ -1.15
VTA1-203ENST00000452973 CAMK2N2Q96S95 79 aa7.89□□□□□ -1.15
VTA1-203ENST00000452973 LECT2O14960 151 aa7.88□□□□□ -1.15
VTA1-203ENST00000452973 TRAV10A0A0B4J240 114 aa7.88□□□□□ -1.15
VTA1-203ENST00000452973 TM2D3Q9BRN9 247 aa7.88□□□□□ -1.15
VTA1-203ENST00000452973 C6orf48Q9UBA6 75 aa7.88□□□□□ -1.15
VTA1-203ENST00000452973 DNAH3Q8TD57 4116 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms