RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 SPART-AS1P0CW21 52 aa7.38□□□□□ -1.23
PKP4-206ENST00000452162 MTURNQ8N3F0 131 aa7.38□□□□□ -1.23
PKP4-206ENST00000452162 SIGMAR1Q99720 223 aa7.38□□□□□ -1.23
PKP4-206ENST00000452162 TRBV20-1A0A075B6N2 111 aa7.37□□□□□ -1.23
PKP4-206ENST00000452162 COX7B2Q8TF08 81 aa7.37□□□□□ -1.23
PKP4-206ENST00000452162 A0A087WZ39 114 aa7.37□□□□□ -1.23
PKP4-206ENST00000452162 LINC00308Q8TCZ7 52 aa7.37□□□□□ -1.23
PKP4-206ENST00000452162 PLECQ15149 4684 aaKnown RBP7.36□□□□□ -1.23
PKP4-206ENST00000452162 TEX48A0A1B0GUV7 120 aa7.36□□□□□ -1.23
PKP4-206ENST00000452162 TMEM262E9PQX1 116 aa7.36□□□□□ -1.23
PKP4-206ENST00000452162 H7C2G1 150 aa7.36□□□□□ -1.23
PKP4-206ENST00000452162 SMCPP49901 116 aaPredicted RBP7.35□□□□□ -1.23
PKP4-206ENST00000452162 NANOS2P60321 138 aaKnown RBP7.35□□□□□ -1.23
PKP4-206ENST00000452162 SCGB1C2P0DMR2 95 aa7.35□□□□□ -1.23
PKP4-206ENST00000452162 SOSTDC1Q6X4U4 206 aa7.35□□□□□ -1.23
PKP4-206ENST00000452162 C11orf45Q8TAV5 145 aa7.35□□□□□ -1.23
PKP4-206ENST00000452162 DYNC2H1Q8NCM8 4307 aaKnown RBP7.35□□□□□ -1.23
PKP4-206ENST00000452162 TRBV30A0A0K0K1B3 111 aa7.34□□□□□ -1.23
PKP4-206ENST00000452162 C3orf84H3BNL1 204 aa7.34□□□□□ -1.23
PKP4-206ENST00000452162 Q1RN00 199 aa7.34□□□□□ -1.23
PKP4-206ENST00000452162 MEIG1Q5JSS6 88 aa7.34□□□□□ -1.23
PKP4-206ENST00000452162 CASC10Q5T4H9 136 aa7.34□□□□□ -1.23
PKP4-206ENST00000452162 PPDPFQ9H3Y8 114 aa7.34□□□□□ -1.23
PKP4-206ENST00000452162 A0A0U1RRA0 63 aa7.34□□□□□ -1.23
PKP4-206ENST00000452162 ETDBQ3ZM63 59 aa7.34□□□□□ -1.23
PKP4-206ENST00000452162 SH2D6Q7Z4S9 175 aa7.34□□□□□ -1.23
PKP4-206ENST00000452162 C5orf38Q86SI9 138 aa7.34□□□□□ -1.23
PKP4-206ENST00000452162 SMIM20Q8N5G0 67 aa7.34□□□□□ -1.23
PKP4-206ENST00000452162 M0QXV9 152 aa7.33□□□□□ -1.24
PKP4-206ENST00000452162 TRIAP1O43715 76 aa7.33□□□□□ -1.24
PKP4-206ENST00000452162 SS18Q15532 418 aa7.33□□□□□ -1.24
PKP4-206ENST00000452162 COPS9Q8WXC6 57 aa7.33□□□□□ -1.24
PKP4-206ENST00000452162 KMT2CQ8NEZ4 4911 aaKnown RBP7.33□□□□□ -1.24
PKP4-206ENST00000452162 MRPL23Q16540 153 aaKnown RBP7.33□□□□□ -1.24
PKP4-206ENST00000452162 TOMM7Q9P0U1 55 aa7.33□□□□□ -1.24
PKP4-206ENST00000452162 ICOSQ9Y6W8 199 aa7.33□□□□□ -1.24
PKP4-206ENST00000452162 HTN3P15516 51 aa7.32□□□□□ -1.24
PKP4-206ENST00000452162 RPL13AP40429 203 aaKnown RBP7.32□□□□□ -1.24
PKP4-206ENST00000452162 XCL1P47992 114 aa7.32□□□□□ -1.24
PKP4-206ENST00000452162 CLPSL2Q6UWE3 100 aa7.32□□□□□ -1.24
PKP4-206ENST00000452162 LINC01561Q8N1V8 128 aa7.32□□□□□ -1.24
PKP4-206ENST00000452162 Q8N3U1 123 aa7.32□□□□□ -1.24
PKP4-206ENST00000452162 Q6ZTC4 211 aa7.31□□□□□ -1.24
PKP4-206ENST00000452162 LELP1Q5T871 98 aa7.31□□□□□ -1.24
PKP4-206ENST00000452162 LINC00269Q8N2A0 174 aa7.31□□□□□ -1.24
PKP4-206ENST00000452162 ATXN8Q156A1 80 aa7.3□□□□□ -1.24
PKP4-206ENST00000452162 C5orf47Q569G3 176 aa7.3□□□□□ -1.24
PKP4-206ENST00000452162 SACSQ9NZJ4 4579 aa7.3□□□□□ -1.24
PKP4-206ENST00000452162 LYSTQ99698 3801 aa7.29□□□□□ -1.24
PKP4-206ENST00000452162 IBA57-AS1B1ANH7 110 aa7.29□□□□□ -1.24
PKP4-206ENST00000452162 ANGP03950 147 aaKnown RBP7.29□□□□□ -1.24
PKP4-206ENST00000452162 MIR7-3HGQ8N6C7 128 aa7.29□□□□□ -1.24
PKP4-206ENST00000452162 REG3AQ06141 175 aa7.28□□□□□ -1.24
PKP4-206ENST00000452162 CD164L2Q6UWJ8 174 aa7.28□□□□□ -1.24
PKP4-206ENST00000452162 Q8IZM0 81 aa7.28□□□□□ -1.24
PKP4-206ENST00000452162 C9JAW5 83 aa7.28□□□□□ -1.24
PKP4-206ENST00000452162 LINC01620Q4KN68 170 aa7.28□□□□□ -1.24
PKP4-206ENST00000452162 CHCHD10Q8WYQ3 142 aaPredicted RBP7.28□□□□□ -1.24
PKP4-206ENST00000452162 NUPR2A6NF83 97 aa7.27□□□□□ -1.24
PKP4-206ENST00000452162 SLC25A20O43772 301 aa7.27□□□□□ -1.24
PKP4-206ENST00000452162 COX6CP09669 75 aa7.27□□□□□ -1.24
PKP4-206ENST00000452162 LINC00158P58513 81 aa7.27□□□□□ -1.25
PKP4-206ENST00000452162 C6orf226Q5I0X4 101 aa7.27□□□□□ -1.25
PKP4-206ENST00000452162 TEN1Q86WV5 123 aa7.27□□□□□ -1.25
PKP4-206ENST00000452162 LINC01600Q96MT4 127 aa7.27□□□□□ -1.25
PKP4-206ENST00000452162 DEFB131BA0A096LNP1 70 aa7.26□□□□□ -1.25
PKP4-206ENST00000452162 TRAV10A0A0B4J240 114 aa7.26□□□□□ -1.25
PKP4-206ENST00000452162 GAGE12HA6NDE8 117 aa7.26□□□□□ -1.25
PKP4-206ENST00000452162 J3QR89 54 aa7.26□□□□□ -1.25
PKP4-206ENST00000452162 COX7A2LO14548 114 aa7.26□□□□□ -1.25
PKP4-206ENST00000452162 FOXI1Q12951 378 aa7.26□□□□□ -1.25
PKP4-206ENST00000452162 H3BNG1 76 aa7.26□□□□□ -1.25
PKP4-206ENST00000452162 KIAA0087Q14695 138 aa7.26□□□□□ -1.25
PKP4-206ENST00000452162 LYPD5Q6UWN5 251 aa7.26□□□□□ -1.25
PKP4-206ENST00000452162 CLEC2BQ92478 149 aa7.26□□□□□ -1.25
PKP4-206ENST00000452162 DNAH1Q9P2D7 4330 aa7.25□□□□□ -1.25
PKP4-206ENST00000452162 IGLV10-54A0A075B6I4 117 aa7.25□□□□□ -1.25
PKP4-206ENST00000452162 LST1O00453 97 aa7.25□□□□□ -1.25
PKP4-206ENST00000452162 CCL18P55774 89 aa7.25□□□□□ -1.25
PKP4-206ENST00000452162 ANKRD29Q8N6D5 301 aa7.25□□□□□ -1.25
PKP4-206ENST00000452162 CARD19Q96LW7 228 aa7.25□□□□□ -1.25
PKP4-206ENST00000452162 SND1-IT1Q9HBX3 110 aa7.25□□□□□ -1.25
PKP4-206ENST00000452162 PRR34Q9NV39 138 aa7.25□□□□□ -1.25
PKP4-206ENST00000452162 KLK5Q9Y337 293 aaPredicted RBP7.25□□□□□ -1.25
PKP4-206ENST00000452162 IGKV2-28A0A075B6P5 120 aa7.25□□□□□ -1.25
PKP4-206ENST00000452162 IGKV2D-28P01615 120 aa7.25□□□□□ -1.25
PKP4-206ENST00000452162 PFN2P35080 140 aa7.25□□□□□ -1.25
PKP4-206ENST00000452162 C2orf82Q6UX34 121 aa7.25□□□□□ -1.25
PKP4-206ENST00000452162 PPDPFLQ8WWR9 84 aa7.25□□□□□ -1.25
PKP4-206ENST00000452162 TRBV10-2A0A0K0K1G8 114 aa7.24□□□□□ -1.25
PKP4-206ENST00000452162 ALMS1Q8TCU4 4167 aa7.23□□□□□ -1.25
PKP4-206ENST00000452162 TRAV13-2A0A0B4J235 113 aa7.23□□□□□ -1.25
PKP4-206ENST00000452162 B5MCH6 92 aa7.23□□□□□ -1.25
PKP4-206ENST00000452162 LINC00337Q8N6G1 96 aa7.23□□□□□ -1.25
PKP4-206ENST00000452162 CRPP02741 224 aa7.23□□□□□ -1.25
PKP4-206ENST00000452162 CXCL5P42830 114 aa7.23□□□□□ -1.25
PKP4-206ENST00000452162 KLK12Q9UKR0 248 aa7.23□□□□□ -1.25
PKP4-206ENST00000452162 RYR3Q15413 4870 aa7.23□□□□□ -1.25
PKP4-206ENST00000452162 VPS13DQ5THJ4 4388 aa7.22□□□□□ -1.25
PKP4-206ENST00000452162 MALP21145 153 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms