RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 CDKN2A-AS1Q9UH64 79 aa13.42□□□□□ -0.26
CPSF7-208ENST00000450000 TNXBP22105 4242 aa13.41□□□□□ -0.26
CPSF7-208ENST00000450000 ODF1Q14990 250 aa13.41□□□□□ -0.26
CPSF7-208ENST00000450000 LINC00469Q8N7U9 141 aa13.41□□□□□ -0.26
CPSF7-208ENST00000450000 SEC11CQ9BY50 192 aa13.41□□□□□ -0.26
CPSF7-208ENST00000450000 GNB1LQ9BYB4 327 aa13.41□□□□□ -0.26
CPSF7-208ENST00000450000 COX19Q49B96 90 aa13.4□□□□□ -0.26
CPSF7-208ENST00000450000 SMCO4Q9NRQ5 59 aa13.4□□□□□ -0.26
CPSF7-208ENST00000450000 CXCL5P42830 114 aa13.39□□□□□ -0.27
CPSF7-208ENST00000450000 C9orf129Q5T035 196 aaKnown RBP13.39□□□□□ -0.27
CPSF7-208ENST00000450000 FA2HQ7L5A8 372 aa13.39□□□□□ -0.27
CPSF7-208ENST00000450000 F8VRH5 84 aa13.38□□□□□ -0.27
CPSF7-208ENST00000450000 UBR4Q5T4S7 5183 aa13.38□□□□□ -0.27
CPSF7-208ENST00000450000 H0Y9J4 135 aa13.37□□□□□ -0.27
CPSF7-208ENST00000450000 LBHQ53QV2 105 aaPredicted RBP13.37□□□□□ -0.27
CPSF7-208ENST00000450000 FABP9Q0Z7S8 132 aa13.36□□□□□ -0.27
CPSF7-208ENST00000450000 COMMD7Q86VX2 200 aa13.36□□□□□ -0.27
CPSF7-208ENST00000450000 KRTAP11-1Q8IUC1 163 aa13.36□□□□□ -0.27
CPSF7-208ENST00000450000 XAGE1AQ9HD64 81 aa13.36□□□□□ -0.27
CPSF7-208ENST00000450000 TINCRA0A1B0GVN0 87 aa13.34□□□□□ -0.27
CPSF7-208ENST00000450000 KRTAP7-1Q8IUC3 87 aa13.34□□□□□ -0.27
CPSF7-208ENST00000450000 IFITM2Q01629 132 aa13.33□□□□□ -0.28
CPSF7-208ENST00000450000 PDZD11Q5EBL8 140 aa13.33□□□□□ -0.28
CPSF7-208ENST00000450000 PRR26Q8N8Z3 221 aa13.33□□□□□ -0.28
CPSF7-208ENST00000450000 COX7B2Q8TF08 81 aa13.33□□□□□ -0.28
CPSF7-208ENST00000450000 MRPL18Q9H0U6 180 aaKnown RBP13.33□□□□□ -0.28
CPSF7-208ENST00000450000 RPS10P5Q9NQ39 176 aa13.33□□□□□ -0.28
CPSF7-208ENST00000450000 C22orf24Q9Y442 160 aa13.33□□□□□ -0.28
CPSF7-208ENST00000450000 H3BRM9 83 aa13.31□□□□□ -0.28
CPSF7-208ENST00000450000 PMVKQ15126 192 aa13.31□□□□□ -0.28
CPSF7-208ENST00000450000 RHEBQ15382 184 aa13.31□□□□□ -0.28
CPSF7-208ENST00000450000 CST9LQ9H4G1 147 aa13.31□□□□□ -0.28
CPSF7-208ENST00000450000 SMIM1B2RUZ4 78 aa13.3□□□□□ -0.28
CPSF7-208ENST00000450000 NUPR1O60356 82 aa13.3□□□□□ -0.28
CPSF7-208ENST00000450000 IGLV1-50A0A075B6I6 118 aa13.29□□□□□ -0.28
CPSF7-208ENST00000450000 NDUFA6P56556 154 aa13.29□□□□□ -0.28
CPSF7-208ENST00000450000 LINC01546A6NGU7 62 aa13.28□□□□□ -0.28
CPSF7-208ENST00000450000 SPINK8P0C7L1 97 aa13.28□□□□□ -0.28
CPSF7-208ENST00000450000 RAB5BP61020 215 aa13.27□□□□□ -0.29
CPSF7-208ENST00000450000 MRPL55Q7Z7F7 128 aaKnown RBP13.27□□□□□ -0.29
CPSF7-208ENST00000450000 IGLV5-45A0A087WSX0 123 aa13.26□□□□□ -0.29
CPSF7-208ENST00000450000 ZNF861PO60384 105 aa13.26□□□□□ -0.29
CPSF7-208ENST00000450000 ATP5LO75964 103 aa13.25□□□□□ -0.29
CPSF7-208ENST00000450000 RPL13AP40429 203 aaKnown RBP13.25□□□□□ -0.29
CPSF7-208ENST00000450000 TP73-AS1Q9UF72 201 aa13.25□□□□□ -0.29
CPSF7-208ENST00000450000 TRAPPC1Q9Y5R8 145 aa13.25□□□□□ -0.29
CPSF7-208ENST00000450000 CARHSP1Q9Y2V2 147 aaKnown RBP13.23□□□□□ -0.29
CPSF7-208ENST00000450000 RPL28P46779 137 aaKnown RBP13.22□□□□□ -0.29
CPSF7-208ENST00000450000 C10orf91Q5T1B1 145 aa13.22□□□□□ -0.29
CPSF7-208ENST00000450000 NKAPP1Q8N9T2 125 aa13.22□□□□□ -0.29
CPSF7-208ENST00000450000 LINC00614P0C842 121 aa13.2□□□□□ -0.3
CPSF7-208ENST00000450000 NDUFA5Q16718 116 aa13.2□□□□□ -0.3
CPSF7-208ENST00000450000 GAGE10A6NGK3 116 aa13.19□□□□□ -0.3
CPSF7-208ENST00000450000 RPL37AP8A6NKH3 93 aa13.19□□□□□ -0.3
CPSF7-208ENST00000450000 BCE1O60756 84 aa13.19□□□□□ -0.3
CPSF7-208ENST00000450000 HBDP02042 147 aa13.19□□□□□ -0.3
CPSF7-208ENST00000450000 KRTAP1-4P0C5Y4 121 aa13.19□□□□□ -0.3
CPSF7-208ENST00000450000 LINC00167Q96N53 147 aa13.18□□□□□ -0.3
CPSF7-208ENST00000450000 APOC3P02656 99 aa13.17□□□□□ -0.3
CPSF7-208ENST00000450000 IGLC3P0DOY3 106 aa13.17□□□□□ -0.3
CPSF7-208ENST00000450000 PFN2P35080 140 aa13.17□□□□□ -0.3
CPSF7-208ENST00000450000 C18orf32Q8TCD1 76 aa13.16□□□□□ -0.3
CPSF7-208ENST00000450000 SNAPINO95295 136 aa13.15□□□□□ -0.3
CPSF7-208ENST00000450000 LRP2P98164 4655 aa13.15□□□□□ -0.3
CPSF7-208ENST00000450000 UBE2AP49459 152 aa13.14□□□□□ -0.31
CPSF7-208ENST00000450000 PMCHL1Q16048 86 aa13.13□□□□□ -0.31
CPSF7-208ENST00000450000 TMEM170BQ5T4T1 132 aa13.13□□□□□ -0.31
CPSF7-208ENST00000450000 BAGE3Q86Y29 109 aa13.13□□□□□ -0.31
CPSF7-208ENST00000450000 SVBPQ8N300 66 aa13.13□□□□□ -0.31
CPSF7-208ENST00000450000 ZNF22P17026 224 aaPredicted RBP13.12□□□□□ -0.31
CPSF7-208ENST00000450000 ERG28Q9UKR5 140 aa13.11□□□□□ -0.31
CPSF7-208ENST00000450000 IGLV5-37A0A075B6J1 123 aa13.1□□□□□ -0.31
CPSF7-208ENST00000450000 A0A096LNJ9 63 aa13.1□□□□□ -0.31
CPSF7-208ENST00000450000 IGLV5-39A0A0G2JS06 123 aa13.1□□□□□ -0.31
CPSF7-208ENST00000450000 RPL24P83731 157 aaKnown RBP13.1□□□□□ -0.31
CPSF7-208ENST00000450000 SFTA2Q6UW10 78 aa13.1□□□□□ -0.31
CPSF7-208ENST00000450000 CRYGAP11844 174 aa13.09□□□□□ -0.31
CPSF7-208ENST00000450000 PRR4Q16378 134 aa13.09□□□□□ -0.31
CPSF7-208ENST00000450000 URB1-AS1Q96HZ7 61 aa13.09□□□□□ -0.31
CPSF7-208ENST00000450000 ZNF625Q96I27 306 aaPredicted RBP13.09□□□□□ -0.31
CPSF7-208ENST00000450000 IGKV2-28A0A075B6P5 120 aa13.08□□□□□ -0.32
CPSF7-208ENST00000450000 IGKV2D-28P01615 120 aa13.08□□□□□ -0.32
CPSF7-208ENST00000450000 COX17Q14061 63 aa13.08□□□□□ -0.32
CPSF7-208ENST00000450000 CHTOPQ9Y3Y2 248 aaKnown RBP13.07□□□□□ -0.32
CPSF7-208ENST00000450000 C11orf86A6NJI1 115 aa13.06□□□□□ -0.32
CPSF7-208ENST00000450000 TYMSOSQ8TAI1 123 aa13.06□□□□□ -0.32
CPSF7-208ENST00000450000 SND1-IT1Q9HBX3 110 aa13.06□□□□□ -0.32
CPSF7-208ENST00000450000 TSPAN13O95857 204 aa13.04□□□□□ -0.32
CPSF7-208ENST00000450000 ATP6V1G1O75348 118 aa13.03□□□□□ -0.32
CPSF7-208ENST00000450000 SCO1O75880 301 aa13.03□□□□□ -0.32
CPSF7-208ENST00000450000 LINC00158P58513 81 aa13.02□□□□□ -0.33
CPSF7-208ENST00000450000 FAM19A1Q7Z5A9 133 aa13.02□□□□□ -0.33
CPSF7-208ENST00000450000 CHCHD1Q96BP2 118 aaKnown RBP13.02□□□□□ -0.33
CPSF7-208ENST00000450000 VPREB1P12018 145 aa13□□□□□ -0.33
CPSF7-208ENST00000450000 IFI27L1Q96BM0 104 aa13□□□□□ -0.33
CPSF7-208ENST00000450000 A0A087X002 238 aa12.99□□□□□ -0.33
CPSF7-208ENST00000450000 TMEM126AQ9H061 195 aa12.98□□□□□ -0.33
CPSF7-208ENST00000450000 TRAV12-1A0A0B4J245 112 aa12.97□□□□□ -0.33
CPSF7-208ENST00000450000 A0A0U1RRA0 63 aa12.97□□□□□ -0.33
CPSF7-208ENST00000450000 HSBP1O75506 76 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms