RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 IGHV3-64DA0A0J9YX35 117 aa2.36□□□□□ -2.03
HMGB3P8-201ENST00000449709 PINLYPA6NC86 204 aa2.36□□□□□ -2.03
HMGB3P8-201ENST00000449709 ODF3BA8MYP8 253 aa2.36□□□□□ -2.03
HMGB3P8-201ENST00000449709 IGHV1-8P0DP01 117 aa2.36□□□□□ -2.03
HMGB3P8-201ENST00000449709 HAMPP81172 84 aa2.36□□□□□ -2.03
HMGB3P8-201ENST00000449709 BSPH1Q075Z2 132 aa2.36□□□□□ -2.03
HMGB3P8-201ENST00000449709 KRTAP24-1Q3LI83 254 aa2.36□□□□□ -2.03
HMGB3P8-201ENST00000449709 CSNK1G2-AS1Q8NCQ2 148 aa2.36□□□□□ -2.03
HMGB3P8-201ENST00000449709 LINC00208Q96KT6 92 aa2.36□□□□□ -2.03
HMGB3P8-201ENST00000449709 B9D2Q9BPU9 175 aa2.36□□□□□ -2.03
HMGB3P8-201ENST00000449709 PRR15LQ9BU68 103 aa2.36□□□□□ -2.03
HMGB3P8-201ENST00000449709 PTPRQQ9UMZ3 2332 aa2.36□□□□□ -2.03
HMGB3P8-201ENST00000449709 TRGV2A0A075B6R0 118 aa2.35□□□□□ -2.03
HMGB3P8-201ENST00000449709 IGHV6-1A0A0B4J1U7 121 aa2.35□□□□□ -2.03
HMGB3P8-201ENST00000449709 IGHV3-35A0A0C4DH35 117 aa2.35□□□□□ -2.03
HMGB3P8-201ENST00000449709 ETDCA0A1B0GVM5 59 aa2.35□□□□□ -2.03
HMGB3P8-201ENST00000449709 IGLV1-51P01701 117 aa2.35□□□□□ -2.03
HMGB3P8-201ENST00000449709 IGHV3-23P01764 117 aa2.35□□□□□ -2.03
HMGB3P8-201ENST00000449709 CCL3L1P16619 93 aa2.35□□□□□ -2.03
HMGB3P8-201ENST00000449709 COX7BP24311 80 aa2.35□□□□□ -2.03
HMGB3P8-201ENST00000449709 CASC2Q6XLA1 102 aa2.35□□□□□ -2.03
HMGB3P8-201ENST00000449709 C9orf163Q8N9P6 203 aa2.35□□□□□ -2.03
HMGB3P8-201ENST00000449709 SPTSSBQ8NFR3 76 aa2.35□□□□□ -2.03
HMGB3P8-201ENST00000449709 LINC01006Q8NI28 216 aa2.35□□□□□ -2.03
HMGB3P8-201ENST00000449709 LINC00467Q9BRT7 94 aa2.35□□□□□ -2.03
HMGB3P8-201ENST00000449709 UNC80Q8N2C7 3258 aa2.34□□□□□ -2.03
HMGB3P8-201ENST00000449709 LRCOL1A6NCL2 159 aa2.34□□□□□ -2.03
HMGB3P8-201ENST00000449709 A6NED7 52 aa2.34□□□□□ -2.03
HMGB3P8-201ENST00000449709 A8MTW9 85 aa2.34□□□□□ -2.03
HMGB3P8-201ENST00000449709 KRTAP10-7P60409 375 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P8-201ENST00000449709 COX7B2Q8TF08 81 aa2.34□□□□□ -2.03
HMGB3P8-201ENST00000449709 ZNF702PQ9H963 129 aa2.34□□□□□ -2.03
HMGB3P8-201ENST00000449709 ASCC3Q8N3C0 2202 aaKnown RBP2.34□□□□□ -2.04
HMGB3P8-201ENST00000449709 CNTRLQ7Z7A1 2325 aa2.33□□□□□ -2.04
HMGB3P8-201ENST00000449709 A0A1W2PNM2 257 aa2.33□□□□□ -2.04
HMGB3P8-201ENST00000449709 NDUFA4O00483 81 aa2.33□□□□□ -2.04
HMGB3P8-201ENST00000449709 APELAP0DMC3 54 aa2.33□□□□□ -2.04
HMGB3P8-201ENST00000449709 C6orf99Q4VX62 202 aa2.33□□□□□ -2.04
HMGB3P8-201ENST00000449709 RNASE13Q5GAN3 156 aaKnown RBP2.33□□□□□ -2.04
HMGB3P8-201ENST00000449709 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.33□□□□□ -2.04
HMGB3P8-201ENST00000449709 DHRS4-AS1Q9P1J3 65 aa2.33□□□□□ -2.04
HMGB3P8-201ENST00000449709 DNAH12Q6ZR08 3092 aa2.33□□□□□ -2.04
HMGB3P8-201ENST00000449709 ABCA1O95477 2261 aa2.33□□□□□ -2.04
HMGB3P8-201ENST00000449709 DNAJC13O75165 2243 aa2.32□□□□□ -2.04
HMGB3P8-201ENST00000449709 IGHV3-72A0A0B4J1Y9 119 aa2.32□□□□□ -2.04
HMGB3P8-201ENST00000449709 A0A1W2PPR1 153 aa2.32□□□□□ -2.04
HMGB3P8-201ENST00000449709 SCXQ7RTU7 201 aa2.32□□□□□ -2.04
HMGB3P8-201ENST00000449709 Q8N377 158 aa2.32□□□□□ -2.04
HMGB3P8-201ENST00000449709 KRTAP2-2Q9BYT5 123 aa2.32□□□□□ -2.04
HMGB3P8-201ENST00000449709 TTTY12Q9BZ98 90 aa2.32□□□□□ -2.04
HMGB3P8-201ENST00000449709 IGHV3OR16-8A0A075B7F1 116 aa2.31□□□□□ -2.04
HMGB3P8-201ENST00000449709 B4DSR2 109 aa2.31□□□□□ -2.04
HMGB3P8-201ENST00000449709 IGLV6-57P01721 117 aa2.31□□□□□ -2.04
HMGB3P8-201ENST00000449709 CCL5P13501 91 aa2.31□□□□□ -2.04
HMGB3P8-201ENST00000449709 SPINK7P58062 85 aa2.31□□□□□ -2.04
HMGB3P8-201ENST00000449709 DEFB103AP81534 67 aa2.31□□□□□ -2.04
HMGB3P8-201ENST00000449709 COX17Q14061 63 aa2.31□□□□□ -2.04
HMGB3P8-201ENST00000449709 KPRPQ5T749 579 aaPredicted RBP2.31□□□□□ -2.04
HMGB3P8-201ENST00000449709 MINOS1Q5TGZ0 78 aa2.31□□□□□ -2.04
HMGB3P8-201ENST00000449709 Q8NAQ8 132 aa2.31□□□□□ -2.04
HMGB3P8-201ENST00000449709 ST20-AS1Q8NBB2 130 aa2.31□□□□□ -2.04
HMGB3P8-201ENST00000449709 FDCSPQ8NFU4 85 aa2.31□□□□□ -2.04
HMGB3P8-201ENST00000449709 ASXL3Q9C0F0 2248 aa2.31□□□□□ -2.04
HMGB3P8-201ENST00000449709 ZNF318Q5VUA4 2279 aa2.3□□□□□ -2.04
HMGB3P8-201ENST00000449709 PLCE1Q9P212 2302 aa2.3□□□□□ -2.04
HMGB3P8-201ENST00000449709 RANBP2P49792 3224 aaKnown RBP2.3□□□□□ -2.04
HMGB3P8-201ENST00000449709 IGLV5-48A0A075B6I7 105 aa2.3□□□□□ -2.04
HMGB3P8-201ENST00000449709 LINC00959A0A1B0GUT2 108 aa2.3□□□□□ -2.04
HMGB3P8-201ENST00000449709 KRTAP10-6P60371 365 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P8-201ENST00000449709 DEFB133Q30KQ1 61 aa2.3□□□□□ -2.04
HMGB3P8-201ENST00000449709 SPINK14Q6IE38 97 aa2.3□□□□□ -2.04
HMGB3P8-201ENST00000449709 ADM2Q7Z4H4 148 aa2.3□□□□□ -2.04
HMGB3P8-201ENST00000449709 COA5Q86WW8 74 aa2.3□□□□□ -2.04
HMGB3P8-201ENST00000449709 Q8IZM0 81 aa2.3□□□□□ -2.04
HMGB3P8-201ENST00000449709 Q8N9W7 124 aa2.3□□□□□ -2.04
HMGB3P8-201ENST00000449709 DEFB104AQ8WTQ1 72 aa2.3□□□□□ -2.04
HMGB3P8-201ENST00000449709 RETNLBQ9BQ08 111 aa2.3□□□□□ -2.04
HMGB3P8-201ENST00000449709 DPM3Q9P2X0 92 aa2.3□□□□□ -2.04
HMGB3P8-201ENST00000449709 U3KQA8 63 aa2.3□□□□□ -2.04
HMGB3P8-201ENST00000449709 WDR87Q6ZQQ6 2873 aa2.29□□□□□ -2.04
HMGB3P8-201ENST00000449709 NDUFAF8A1L188 74 aa2.29□□□□□ -2.04
HMGB3P8-201ENST00000449709 LINC00158P58513 81 aa2.29□□□□□ -2.04
HMGB3P8-201ENST00000449709 DSCR10P59022 87 aa2.29□□□□□ -2.04
HMGB3P8-201ENST00000449709 ROMO1P60602 79 aa2.29□□□□□ -2.04
HMGB3P8-201ENST00000449709 SPATA8Q6RVD6 105 aa2.29□□□□□ -2.04
HMGB3P8-201ENST00000449709 Q6ZQY7 126 aa2.29□□□□□ -2.04
HMGB3P8-201ENST00000449709 Q8N9L7 120 aa2.29□□□□□ -2.04
HMGB3P8-201ENST00000449709 SPRR4Q96PI1 79 aa2.29□□□□□ -2.04
HMGB3P8-201ENST00000449709 XAGE1AQ9HD64 81 aa2.29□□□□□ -2.04
HMGB3P8-201ENST00000449709 CFAP54Q96N23 3096 aa2.29□□□□□ -2.04
HMGB3P8-201ENST00000449709 USP34Q70CQ2 3546 aa2.29□□□□□ -2.04
HMGB3P8-201ENST00000449709 XIRP2A4UGR9 3374 aa2.29□□□□□ -2.04
HMGB3P8-201ENST00000449709 IGKV2D-24A0A075B6R9 120 aa2.28□□□□□ -2.04
HMGB3P8-201ENST00000449709 PRR4Q16378 134 aa2.28□□□□□ -2.04
HMGB3P8-201ENST00000449709 C11orf71Q6IPW1 123 aa2.28□□□□□ -2.04
HMGB3P8-201ENST00000449709 LYPD2Q6UXB3 125 aa2.28□□□□□ -2.04
HMGB3P8-201ENST00000449709 Q6ZR54 194 aa2.28□□□□□ -2.04
HMGB3P8-201ENST00000449709 Q8NDZ9 215 aa2.28□□□□□ -2.04
HMGB3P8-201ENST00000449709 DEFB108BQ8NET1 73 aa2.28□□□□□ -2.04
HMGB3P8-201ENST00000449709 CHCHD10Q8WYQ3 142 aaPredicted RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms