RNA–Protein interactions for RNA: ENST00000449538.3

HIST1H2BN-202, Transcript of histone cluster 1 H2B family member n, humanhuman

TSL 1 (best)

Gene HIST1H2BN, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BN-202ENST00000449538 KRTAP29-1A8MX34 341 aaPredicted RBP10.94□□□□□ -0.66
HIST1H2BN-202ENST00000449538 PMCHL1Q16048 86 aa10.94□□□□□ -0.66
HIST1H2BN-202ENST00000449538 C9orf116Q5BN46 136 aaPredicted RBP10.94□□□□□ -0.66
HIST1H2BN-202ENST00000449538 Q6ZRP5 223 aa10.94□□□□□ -0.66
HIST1H2BN-202ENST00000449538 A0A1W2PNN7 141 aa10.93□□□□□ -0.66
HIST1H2BN-202ENST00000449538 ATP5LO75964 103 aa10.93□□□□□ -0.66
HIST1H2BN-202ENST00000449538 HNRNPA3P51991 378 aaKnown RBP10.93□□□□□ -0.66
HIST1H2BN-202ENST00000449538 NDUFA6P56556 154 aa10.93□□□□□ -0.66
HIST1H2BN-202ENST00000449538 PDZD11Q5EBL8 140 aa10.93□□□□□ -0.66
HIST1H2BN-202ENST00000449538 SMIM1B2RUZ4 78 aa10.92□□□□□ -0.66
HIST1H2BN-202ENST00000449538 CXCL5P42830 114 aa10.92□□□□□ -0.66
HIST1H2BN-202ENST00000449538 PRR3P79522 188 aaKnown RBP10.92□□□□□ -0.66
HIST1H2BN-202ENST00000449538 GAGE2EQ4V326 116 aa10.92□□□□□ -0.66
HIST1H2BN-202ENST00000449538 CHCHD1Q96BP2 118 aaKnown RBP10.92□□□□□ -0.66
HIST1H2BN-202ENST00000449538 GAGE2DQ9UEU5 116 aa10.92□□□□□ -0.66
HIST1H2BN-202ENST00000449538 NDUFC2-KCTD14E9PQ53 114 aa10.91□□□□□ -0.66
HIST1H2BN-202ENST00000449538 H3BRM9 83 aa10.91□□□□□ -0.66
HIST1H2BN-202ENST00000449538 OXTP01178 125 aa10.91□□□□□ -0.66
HIST1H2BN-202ENST00000449538 F8VRH5 84 aa10.9□□□□□ -0.66
HIST1H2BN-202ENST00000449538 IGLC3P0DOY3 106 aa10.9□□□□□ -0.66
HIST1H2BN-202ENST00000449538 COX7B2Q8TF08 81 aa10.89□□□□□ -0.67
HIST1H2BN-202ENST00000449538 TRGC2P03986 189 aa10.88□□□□□ -0.67
HIST1H2BN-202ENST00000449538 SPINK8P0C7L1 97 aa10.88□□□□□ -0.67
HIST1H2BN-202ENST00000449538 BAGE3Q86Y29 109 aa10.88□□□□□ -0.67
HIST1H2BN-202ENST00000449538 DMBT1Q9UGM3 2413 aaPredicted RBP10.88□□□□□ -0.67
HIST1H2BN-202ENST00000449538 MYCBP2O75592 4640 aa10.88□□□□□ -0.67
HIST1H2BN-202ENST00000449538 FAM168BA1KXE4 195 aa10.86□□□□□ -0.67
HIST1H2BN-202ENST00000449538 HSBP1O75506 76 aa10.86□□□□□ -0.67
HIST1H2BN-202ENST00000449538 FAM19A5Q7Z5A7 132 aaPredicted RBP10.86□□□□□ -0.67
HIST1H2BN-202ENST00000449538 PHF5AQ7RTV0 110 aaKnown RBP10.85□□□□□ -0.67
HIST1H2BN-202ENST00000449538 ZNF22P17026 224 aaPredicted RBP10.84□□□□□ -0.67
HIST1H2BN-202ENST00000449538 IFI27L1Q96BM0 104 aa10.84□□□□□ -0.67
HIST1H2BN-202ENST00000449538 COLCA2A8K830 154 aa10.83□□□□□ -0.68
HIST1H2BN-202ENST00000449538 C9orf129Q5T035 196 aaKnown RBP10.83□□□□□ -0.68
HIST1H2BN-202ENST00000449538 CHTOPQ9Y3Y2 248 aaKnown RBP10.82□□□□□ -0.68
HIST1H2BN-202ENST00000449538 TRAV12-1A0A0B4J245 112 aa10.81□□□□□ -0.68
HIST1H2BN-202ENST00000449538 IGLV5-39A0A0G2JS06 123 aa10.81□□□□□ -0.68
HIST1H2BN-202ENST00000449538 C11orf86A6NJI1 115 aa10.81□□□□□ -0.68
HIST1H2BN-202ENST00000449538 M0QXV9 152 aa10.81□□□□□ -0.68
HIST1H2BN-202ENST00000449538 TMEM170BQ5T4T1 132 aa10.81□□□□□ -0.68
HIST1H2BN-202ENST00000449538 SPINK6Q6UWN8 80 aa10.81□□□□□ -0.68
HIST1H2BN-202ENST00000449538 FAM19A2Q8N3H0 131 aa10.81□□□□□ -0.68
HIST1H2BN-202ENST00000449538 PSORS1C2Q9UIG4 136 aa10.81□□□□□ -0.68
HIST1H2BN-202ENST00000449538 XAGE1AQ9HD64 81 aa10.8□□□□□ -0.68
HIST1H2BN-202ENST00000449538 SERF1AO75920 110 aa10.79□□□□□ -0.68
HIST1H2BN-202ENST00000449538 KRTAP7-1Q8IUC3 87 aa10.79□□□□□ -0.68
HIST1H2BN-202ENST00000449538 UBE2BP63146 152 aa10.78□□□□□ -0.68
HIST1H2BN-202ENST00000449538 C1orf137Q5JT78 98 aa10.78□□□□□ -0.68
HIST1H2BN-202ENST00000449538 LEPROTL1O95214 131 aa10.76□□□□□ -0.69
HIST1H2BN-202ENST00000449538 SRSF9Q13242 221 aaKnown RBP eCLIP10.76□□□□□ -0.69
HIST1H2BN-202ENST00000449538 SFTA2Q6UW10 78 aa10.76□□□□□ -0.69
HIST1H2BN-202ENST00000449538 LINC00310P59036 64 aa10.75□□□□□ -0.69
HIST1H2BN-202ENST00000449538 SERTAD4-AS1Q5TG53 156 aa10.75□□□□□ -0.69
HIST1H2BN-202ENST00000449538 REG3GQ6UW15 175 aa10.75□□□□□ -0.69
HIST1H2BN-202ENST00000449538 SCO1O75880 301 aa10.74□□□□□ -0.69
HIST1H2BN-202ENST00000449538 ODF1Q14990 250 aa10.74□□□□□ -0.69
HIST1H2BN-202ENST00000449538 LBHQ53QV2 105 aaPredicted RBP10.74□□□□□ -0.69
HIST1H2BN-202ENST00000449538 HSPB8Q9UJY1 196 aa10.74□□□□□ -0.69
HIST1H2BN-202ENST00000449538 C22orf24Q9Y442 160 aa10.74□□□□□ -0.69
HIST1H2BN-202ENST00000449538 PKHD1L1Q86WI1 4243 aa10.73□□□□□ -0.69
HIST1H2BN-202ENST00000449538 TMEM223A0PJW6 202 aa10.73□□□□□ -0.69
HIST1H2BN-202ENST00000449538 H0Y8G0 127 aa10.73□□□□□ -0.69
HIST1H2BN-202ENST00000449538 PFN2P35080 140 aa10.73□□□□□ -0.69
HIST1H2BN-202ENST00000449538 KRTAP11-1Q8IUC1 163 aa10.73□□□□□ -0.69
HIST1H2BN-202ENST00000449538 IGLV7-43P04211 117 aa10.72□□□□□ -0.69
HIST1H2BN-202ENST00000449538 TP73-AS1Q9UF72 201 aa10.72□□□□□ -0.69
HIST1H2BN-202ENST00000449538 ERG28Q9UKR5 140 aa10.72□□□□□ -0.69
HIST1H2BN-202ENST00000449538 HERC1Q15751 4861 aa10.72□□□□□ -0.69
HIST1H2BN-202ENST00000449538 LRP1Q07954 4544 aaKnown RBP10.71□□□□□ -0.69
HIST1H2BN-202ENST00000449538 NUPR1O60356 82 aa10.71□□□□□ -0.69
HIST1H2BN-202ENST00000449538 COX17Q14061 63 aa10.71□□□□□ -0.69
HIST1H2BN-202ENST00000449538 LINC01600Q96MT4 127 aa10.71□□□□□ -0.69
HIST1H2BN-202ENST00000449538 PLA2G2DQ9UNK4 145 aa10.71□□□□□ -0.69
HIST1H2BN-202ENST00000449538 MT1HL1P0DM35 61 aa10.7□□□□□ -0.7
HIST1H2BN-202ENST00000449538 MRPL55Q7Z7F7 128 aaKnown RBP10.7□□□□□ -0.7
HIST1H2BN-202ENST00000449538 ZNF625Q96I27 306 aaPredicted RBP10.7□□□□□ -0.7
HIST1H2BN-202ENST00000449538 FABP4P15090 132 aa10.69□□□□□ -0.7
HIST1H2BN-202ENST00000449538 DIRC1Q969H9 104 aa10.68□□□□□ -0.7
HIST1H2BN-202ENST00000449538 HIST1H2BKO60814 126 aa10.67□□□□□ -0.7
HIST1H2BN-202ENST00000449538 HIST1H2BJP06899 126 aa10.67□□□□□ -0.7
HIST1H2BN-202ENST00000449538 HIST1H2BOP23527 126 aa10.67□□□□□ -0.7
HIST1H2BN-202ENST00000449538 PLNP26678 52 aa10.67□□□□□ -0.7
HIST1H2BN-202ENST00000449538 HIST1H2BBP33778 126 aa10.67□□□□□ -0.7
HIST1H2BN-202ENST00000449538 HIST1H2BDP58876 126 aa10.67□□□□□ -0.7
HIST1H2BN-202ENST00000449538 HIST1H2BCP62807 126 aa10.67□□□□□ -0.7
HIST1H2BN-202ENST00000449538 HIST2H2BEQ16778 126 aa10.67□□□□□ -0.7
HIST1H2BN-202ENST00000449538 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.67□□□□□ -0.7
HIST1H2BN-202ENST00000449538 NKAPP1Q8N9T2 125 aa10.67□□□□□ -0.7
HIST1H2BN-202ENST00000449538 HIST1H2BHQ93079 126 aa10.67□□□□□ -0.7
HIST1H2BN-202ENST00000449538 HIST1H2BNQ99877 126 aa10.67□□□□□ -0.7
HIST1H2BN-202ENST00000449538 HIST1H2BMQ99879 126 aa10.67□□□□□ -0.7
HIST1H2BN-202ENST00000449538 FAT3Q8TDW7 4589 aa10.66□□□□□ -0.7
HIST1H2BN-202ENST00000449538 IGLV5-37A0A075B6J1 123 aa10.66□□□□□ -0.7
HIST1H2BN-202ENST00000449538 SND1-IT1Q9HBX3 110 aa10.66□□□□□ -0.7
HIST1H2BN-202ENST00000449538 MAP1LC3CQ9BXW4 147 aa10.65□□□□□ -0.7
HIST1H2BN-202ENST00000449538 DPM2O94777 84 aa10.64□□□□□ -0.71
HIST1H2BN-202ENST00000449538 LINC00158P58513 81 aa10.64□□□□□ -0.71
HIST1H2BN-202ENST00000449538 LINC00167Q96N53 147 aa10.64□□□□□ -0.71
HIST1H2BN-202ENST00000449538 H0Y9J4 135 aa10.63□□□□□ -0.71
HIST1H2BN-202ENST00000449538 GAGE10A6NGK3 116 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms