RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 LINC00269Q8N2A0 174 aa7.68□□□□□ -1.18
AC004540.1-204ENST00000449537 TIMM17AQ99595 171 aa7.68□□□□□ -1.18
AC004540.1-204ENST00000449537 FGF6P10767 208 aa7.67□□□□□ -1.18
AC004540.1-204ENST00000449537 MRPS36P82909 103 aaKnown RBP7.67□□□□□ -1.18
AC004540.1-204ENST00000449537 TEX43Q6ZNM6 134 aa7.67□□□□□ -1.18
AC004540.1-204ENST00000449537 ERASQ7Z444 233 aa7.67□□□□□ -1.18
AC004540.1-204ENST00000449537 OR5A1Q8NGJ0 315 aa7.67□□□□□ -1.18
AC004540.1-204ENST00000449537 UBE2D4Q9Y2X8 147 aa7.67□□□□□ -1.18
AC004540.1-204ENST00000449537 IGLV10-54A0A075B6I4 117 aa7.66□□□□□ -1.18
AC004540.1-204ENST00000449537 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.66□□□□□ -1.18
AC004540.1-204ENST00000449537 IGKV2-29A2NJV5 120 aaPredicted RBP7.66□□□□□ -1.18
AC004540.1-204ENST00000449537 LINC01545Q5VT33 79 aa7.66□□□□□ -1.18
AC004540.1-204ENST00000449537 TRAV12-1A0A0B4J245 112 aa7.65□□□□□ -1.18
AC004540.1-204ENST00000449537 CCL25O15444 150 aa7.65□□□□□ -1.18
AC004540.1-204ENST00000449537 PLNP26678 52 aa7.65□□□□□ -1.18
AC004540.1-204ENST00000449537 RBX1P62877 108 aa7.65□□□□□ -1.18
AC004540.1-204ENST00000449537 GAGE6Q13070 117 aa7.65□□□□□ -1.18
AC004540.1-204ENST00000449537 LINC00173Q6ZV60 143 aa7.65□□□□□ -1.18
AC004540.1-204ENST00000449537 C2orf88Q9BSF0 95 aa7.64□□□□□ -1.19
AC004540.1-204ENST00000449537 LINC00474Q9P2X8 69 aa7.64□□□□□ -1.19
AC004540.1-204ENST00000449537 TRAV8-4A0A0B4J246 113 aa7.63□□□□□ -1.19
AC004540.1-204ENST00000449537 DPM2O94777 84 aa7.63□□□□□ -1.19
AC004540.1-204ENST00000449537 PAM16Q9Y3D7 125 aa7.63□□□□□ -1.19
AC004540.1-204ENST00000449537 A0A096LNI7 61 aa7.62□□□□□ -1.19
AC004540.1-204ENST00000449537 IGIPA6NJ69 53 aa7.62□□□□□ -1.19
AC004540.1-204ENST00000449537 F8VRH5 84 aa7.62□□□□□ -1.19
AC004540.1-204ENST00000449537 IGKCP01834 107 aa7.62□□□□□ -1.19
AC004540.1-204ENST00000449537 RPL39P62891 51 aaKnown RBP7.62□□□□□ -1.19
AC004540.1-204ENST00000449537 PMVKQ15126 192 aa7.62□□□□□ -1.19
AC004540.1-204ENST00000449537 SPATA45Q537H7 98 aa7.62□□□□□ -1.19
AC004540.1-204ENST00000449537 CDC42SE2Q9NRR3 84 aa7.62□□□□□ -1.19
AC004540.1-204ENST00000449537 IGLV1-50A0A075B6I6 118 aa7.61□□□□□ -1.19
AC004540.1-204ENST00000449537 IGLV4-3A0A075B6K6 122 aa7.61□□□□□ -1.19
AC004540.1-204ENST00000449537 LINC01547P58512 204 aaPredicted RBP7.61□□□□□ -1.19
AC004540.1-204ENST00000449537 SEC11AP67812 179 aa7.61□□□□□ -1.19
AC004540.1-204ENST00000449537 REG3AQ06141 175 aa7.61□□□□□ -1.19
AC004540.1-204ENST00000449537 CFAP161Q6P656 301 aa7.61□□□□□ -1.19
AC004540.1-204ENST00000449537 CHTOPQ9Y3Y2 248 aaKnown RBP7.61□□□□□ -1.19
AC004540.1-204ENST00000449537 IGLV4-60A0A075B6I1 120 aa7.6□□□□□ -1.19
AC004540.1-204ENST00000449537 PCP4L1A6NKN8 68 aa7.6□□□□□ -1.19
AC004540.1-204ENST00000449537 KRTAP9-7A8MTY7 169 aa7.6□□□□□ -1.19
AC004540.1-204ENST00000449537 HERVK_113P61574 105 aa7.6□□□□□ -1.19
AC004540.1-204ENST00000449537 Q6ZUT4 128 aa7.6□□□□□ -1.19
AC004540.1-204ENST00000449537 ATOH7Q8N100 152 aa7.6□□□□□ -1.19
AC004540.1-204ENST00000449537 DIRC1Q969H9 104 aa7.6□□□□□ -1.19
AC004540.1-204ENST00000449537 VCX2Q9H322 139 aa7.6□□□□□ -1.19
AC004540.1-204ENST00000449537 AMELXQ99217 191 aa7.59□□□□□ -1.19
AC004540.1-204ENST00000449537 SS18Q15532 418 aa7.58□□□□□ -1.2
AC004540.1-204ENST00000449537 PMCHL2Q9BQD1 86 aa7.58□□□□□ -1.2
AC004540.1-204ENST00000449537 PRO1933Q9H354 126 aa7.58□□□□□ -1.2
AC004540.1-204ENST00000449537 UQCR10Q9UDW1 63 aa7.58□□□□□ -1.2
AC004540.1-204ENST00000449537 FAM19A3Q7Z5A8 133 aa7.57□□□□□ -1.2
AC004540.1-204ENST00000449537 CST9LQ9H4G1 147 aa7.57□□□□□ -1.2
AC004540.1-204ENST00000449537 MRPL35Q9NZE8 188 aaKnown RBP7.57□□□□□ -1.2
AC004540.1-204ENST00000449537 LINC00959A0A1B0GUT2 108 aa7.56□□□□□ -1.2
AC004540.1-204ENST00000449537 HIGD2BQ4VC39 106 aa7.56□□□□□ -1.2
AC004540.1-204ENST00000449537 C1orf137Q5JT78 98 aa7.56□□□□□ -1.2
AC004540.1-204ENST00000449537 C15orf56Q8N910 161 aa7.56□□□□□ -1.2
AC004540.1-204ENST00000449537 PKIGQ9Y2B9 76 aa7.56□□□□□ -1.2
AC004540.1-204ENST00000449537 TSPAN13O95857 204 aa7.55□□□□□ -1.2
AC004540.1-204ENST00000449537 DDTP30046 118 aa7.55□□□□□ -1.2
AC004540.1-204ENST00000449537 UBE2D1P51668 147 aa7.55□□□□□ -1.2
AC004540.1-204ENST00000449537 HERVK_113P63121 156 aa7.55□□□□□ -1.2
AC004540.1-204ENST00000449537 MIEN1Q9BRT3 115 aa7.55□□□□□ -1.2
AC004540.1-204ENST00000449537 IGLC3P0DOY3 106 aa7.54□□□□□ -1.2
AC004540.1-204ENST00000449537 ZC2HC1BQ5TFG8 222 aa7.54□□□□□ -1.2
AC004540.1-204ENST00000449537 SLC25A34Q6PIV7 304 aa7.54□□□□□ -1.2
AC004540.1-204ENST00000449537 CD164L2Q6UWJ8 174 aa7.54□□□□□ -1.2
AC004540.1-204ENST00000449537 FAM104AQ969W3 186 aa7.54□□□□□ -1.2
AC004540.1-204ENST00000449537 GEMIN7Q9H840 131 aaKnown RBP7.54□□□□□ -1.2
AC004540.1-204ENST00000449537 TRAV13-1A0A0B4J241 112 aa7.53□□□□□ -1.2
AC004540.1-204ENST00000449537 TINCRA0A1B0GVN0 87 aa7.53□□□□□ -1.2
AC004540.1-204ENST00000449537 C11orf86A6NJI1 115 aa7.53□□□□□ -1.2
AC004540.1-204ENST00000449537 H3BRM9 83 aa7.53□□□□□ -1.2
AC004540.1-204ENST00000449537 RPL13AP40429 203 aaKnown RBP7.53□□□□□ -1.2
AC004540.1-204ENST00000449537 NMUP48645 174 aa7.53□□□□□ -1.2
AC004540.1-204ENST00000449537 LINC01561Q8N1V8 128 aa7.53□□□□□ -1.2
AC004540.1-204ENST00000449537 CHCHD10Q8WYQ3 142 aaPredicted RBP7.53□□□□□ -1.2
AC004540.1-204ENST00000449537 CDIP1Q9H305 208 aa7.53□□□□□ -1.2
AC004540.1-204ENST00000449537 H0Y9J4 135 aa7.52□□□□□ -1.21
AC004540.1-204ENST00000449537 RNASE13Q5GAN3 156 aaKnown RBP7.52□□□□□ -1.21
AC004540.1-204ENST00000449537 TMEM170BQ5T4T1 132 aa7.52□□□□□ -1.21
AC004540.1-204ENST00000449537 OPRPNQ99935 248 aaPredicted RBP7.52□□□□□ -1.21
AC004540.1-204ENST00000449537 IGLV4-69A0A075B6H9 119 aa7.51□□□□□ -1.21
AC004540.1-204ENST00000449537 IGLV5-45A0A087WSX0 123 aa7.51□□□□□ -1.21
AC004540.1-204ENST00000449537 IGKV3OR2-268A0A0C4DH90 116 aa7.51□□□□□ -1.21
AC004540.1-204ENST00000449537 GAGE12HA6NDE8 117 aa7.51□□□□□ -1.21
AC004540.1-204ENST00000449537 APOMO95445 188 aa7.51□□□□□ -1.21
AC004540.1-204ENST00000449537 IGLV7-43P04211 117 aa7.51□□□□□ -1.21
AC004540.1-204ENST00000449537 COX8AP10176 69 aa7.51□□□□□ -1.21
AC004540.1-204ENST00000449537 LINC00242Q5T6M2 205 aa7.51□□□□□ -1.21
AC004540.1-204ENST00000449537 IGHV3OR16-9A0A0B4J2B5 98 aa7.5□□□□□ -1.21
AC004540.1-204ENST00000449537 COX7A2LO14548 114 aa7.5□□□□□ -1.21
AC004540.1-204ENST00000449537 KRTAP1-4P0C5Y4 121 aa7.5□□□□□ -1.21
AC004540.1-204ENST00000449537 XCL1P47992 114 aa7.5□□□□□ -1.21
AC004540.1-204ENST00000449537 C14orf144Q96I85 54 aa7.5□□□□□ -1.21
AC004540.1-204ENST00000449537 GVQW2A0A096LPI5 108 aaPredicted RBP7.49□□□□□ -1.21
AC004540.1-204ENST00000449537 E9PLD3 99 aa7.49□□□□□ -1.21
AC004540.1-204ENST00000449537 DLEU1O43261 78 aa7.49□□□□□ -1.21
AC004540.1-204ENST00000449537 FOXI1Q12951 378 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms