RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 PMVKQ15126 192 aa15.73■□□□□ 0.11
HTATSF1-203ENST00000448450 PRSS2P07478 247 aa15.72■□□□□ 0.11
HTATSF1-203ENST00000448450 LINC00469Q8N7U9 141 aa15.72■□□□□ 0.11
HTATSF1-203ENST00000448450 C7orf33Q8WU49 177 aa15.72■□□□□ 0.11
HTATSF1-203ENST00000448450 PACRGQ96M98 296 aaPredicted RBP15.72■□□□□ 0.11
HTATSF1-203ENST00000448450 HBDP02042 147 aa15.71■□□□□ 0.11
HTATSF1-203ENST00000448450 NDUFA6P56556 154 aa15.71■□□□□ 0.11
HTATSF1-203ENST00000448450 TINCRA0A1B0GVN0 87 aa15.7■□□□□ 0.1
HTATSF1-203ENST00000448450 A0A1W2PNN7 141 aa15.69■□□□□ 0.1
HTATSF1-203ENST00000448450 C6orf226Q5I0X4 101 aa15.69■□□□□ 0.1
HTATSF1-203ENST00000448450 HNRNPA3P51991 378 aaKnown RBP15.68■□□□□ 0.1
HTATSF1-203ENST00000448450 CKS1BP61024 79 aa15.67■□□□□ 0.1
HTATSF1-203ENST00000448450 GAGE2EQ4V326 116 aa15.66■□□□□ 0.1
HTATSF1-203ENST00000448450 C9orf116Q5BN46 136 aaPredicted RBP15.66■□□□□ 0.1
HTATSF1-203ENST00000448450 PDZD11Q5EBL8 140 aa15.66■□□□□ 0.1
HTATSF1-203ENST00000448450 Q6ZRP5 223 aa15.66■□□□□ 0.1
HTATSF1-203ENST00000448450 Q8IZM0 81 aa15.66■□□□□ 0.1
HTATSF1-203ENST00000448450 GAGE2DQ9UEU5 116 aa15.66■□□□□ 0.1
HTATSF1-203ENST00000448450 TRBV30A0A0K0K1B3 111 aa15.65■□□□□ 0.1
HTATSF1-203ENST00000448450 TRGC2P03986 189 aa15.65■□□□□ 0.1
HTATSF1-203ENST00000448450 TLX1NBP0CAT3 122 aa15.64■□□□□ 0.09
HTATSF1-203ENST00000448450 IGLV5-45A0A087WSX0 123 aa15.63■□□□□ 0.09
HTATSF1-203ENST00000448450 SMIM1B2RUZ4 78 aa15.63■□□□□ 0.09
HTATSF1-203ENST00000448450 SPINK8P0C7L1 97 aa15.63■□□□□ 0.09
HTATSF1-203ENST00000448450 ATP5LO75964 103 aa15.62■□□□□ 0.09
HTATSF1-203ENST00000448450 CHCHD1Q96BP2 118 aaKnown RBP15.62■□□□□ 0.09
HTATSF1-203ENST00000448450 BAGE3Q86Y29 109 aa15.61■□□□□ 0.09
HTATSF1-203ENST00000448450 IGLC3P0DOY3 106 aa15.6■□□□□ 0.09
HTATSF1-203ENST00000448450 FAM168BA1KXE4 195 aa15.59■□□□□ 0.09
HTATSF1-203ENST00000448450 COLCA2A8K830 154 aa15.59■□□□□ 0.09
HTATSF1-203ENST00000448450 NDUFC2-KCTD14E9PQ53 114 aa15.59■□□□□ 0.09
HTATSF1-203ENST00000448450 COX7B2Q8TF08 81 aa15.59■□□□□ 0.09
HTATSF1-203ENST00000448450 H3BRM9 83 aa15.58■□□□□ 0.08
HTATSF1-203ENST00000448450 PRR3P79522 188 aaKnown RBP15.57■□□□□ 0.08
HTATSF1-203ENST00000448450 PHF5AQ7RTV0 110 aaKnown RBP15.57■□□□□ 0.08
HTATSF1-203ENST00000448450 F8VRH5 84 aa15.56■□□□□ 0.08
HTATSF1-203ENST00000448450 HSBP1O75506 76 aa15.56■□□□□ 0.08
HTATSF1-203ENST00000448450 MT1HL1P0DM35 61 aa15.56■□□□□ 0.08
HTATSF1-203ENST00000448450 FAM19A2Q8N3H0 131 aa15.56■□□□□ 0.08
HTATSF1-203ENST00000448450 FAM19A5Q7Z5A7 132 aaPredicted RBP15.55■□□□□ 0.08
HTATSF1-203ENST00000448450 SCO1O75880 301 aa15.54■□□□□ 0.08
HTATSF1-203ENST00000448450 ZNF22P17026 224 aaPredicted RBP15.54■□□□□ 0.08
HTATSF1-203ENST00000448450 CXCL5P42830 114 aa15.54■□□□□ 0.08
HTATSF1-203ENST00000448450 IFI27L1Q96BM0 104 aa15.53■□□□□ 0.08
HTATSF1-203ENST00000448450 C11orf86A6NJI1 115 aa15.52■□□□□ 0.08
HTATSF1-203ENST00000448450 C9orf129Q5T035 196 aaKnown RBP15.52■□□□□ 0.08
HTATSF1-203ENST00000448450 CHTOPQ9Y3Y2 248 aaKnown RBP15.52■□□□□ 0.08
HTATSF1-203ENST00000448450 SERF1AO75920 110 aa15.5■□□□□ 0.07
HTATSF1-203ENST00000448450 TMEM170BQ5T4T1 132 aa15.5■□□□□ 0.07
HTATSF1-203ENST00000448450 KRTAP7-1Q8IUC3 87 aa15.5■□□□□ 0.07
HTATSF1-203ENST00000448450 XAGE1AQ9HD64 81 aa15.49■□□□□ 0.07
HTATSF1-203ENST00000448450 LINC00310P59036 64 aa15.48■□□□□ 0.07
HTATSF1-203ENST00000448450 RNF213Q63HN8 5207 aa15.48■□□□□ 0.07
HTATSF1-203ENST00000448450 IGLV5-39A0A0G2JS06 123 aa15.47■□□□□ 0.07
HTATSF1-203ENST00000448450 PSORS1C2Q9UIG4 136 aa15.47■□□□□ 0.07
HTATSF1-203ENST00000448450 NUPR1O60356 82 aa15.46■□□□□ 0.07
HTATSF1-203ENST00000448450 TRAV12-1A0A0B4J245 112 aa15.45■□□□□ 0.06
HTATSF1-203ENST00000448450 M0QXV9 152 aa15.45■□□□□ 0.06
HTATSF1-203ENST00000448450 LRP2P98164 4655 aa15.45■□□□□ 0.06
HTATSF1-203ENST00000448450 H0Y8G0 127 aa15.43■□□□□ 0.06
HTATSF1-203ENST00000448450 KRTAP11-1Q8IUC1 163 aa15.43■□□□□ 0.06
HTATSF1-203ENST00000448450 LEPROTL1O95214 131 aa15.42■□□□□ 0.06
HTATSF1-203ENST00000448450 C1orf137Q5JT78 98 aa15.42■□□□□ 0.06
HTATSF1-203ENST00000448450 FABP4P15090 132 aa15.4■□□□□ 0.06
HTATSF1-203ENST00000448450 UBE2BP63146 152 aa15.4■□□□□ 0.06
HTATSF1-203ENST00000448450 SRSF9Q13242 221 aaKnown RBP eCLIP15.39■□□□□ 0.05
HTATSF1-203ENST00000448450 SPINK6Q6UWN8 80 aa15.39■□□□□ 0.05
HTATSF1-203ENST00000448450 PFN2P35080 140 aa15.38■□□□□ 0.05
HTATSF1-203ENST00000448450 ZNF625Q96I27 306 aaPredicted RBP15.38■□□□□ 0.05
HTATSF1-203ENST00000448450 C22orf24Q9Y442 160 aa15.38■□□□□ 0.05
HTATSF1-203ENST00000448450 TNXBP22105 4242 aa15.37■□□□□ 0.05
HTATSF1-203ENST00000448450 TMEM223A0PJW6 202 aa15.37■□□□□ 0.05
HTATSF1-203ENST00000448450 ODF1Q14990 250 aa15.35■□□□□ 0.05
HTATSF1-203ENST00000448450 HSPB8Q9UJY1 196 aa15.35■□□□□ 0.05
HTATSF1-203ENST00000448450 HIST1H2BKO60814 126 aa15.34■□□□□ 0.05
HTATSF1-203ENST00000448450 HIST1H2BJP06899 126 aa15.34■□□□□ 0.05
HTATSF1-203ENST00000448450 HIST1H2BOP23527 126 aa15.34■□□□□ 0.05
HTATSF1-203ENST00000448450 HIST1H2BBP33778 126 aa15.34■□□□□ 0.05
HTATSF1-203ENST00000448450 HIST1H2BDP58876 126 aa15.34■□□□□ 0.05
HTATSF1-203ENST00000448450 HIST1H2BCP62807 126 aa15.34■□□□□ 0.05
HTATSF1-203ENST00000448450 HIST2H2BEQ16778 126 aa15.34■□□□□ 0.05
HTATSF1-203ENST00000448450 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.34■□□□□ 0.05
HTATSF1-203ENST00000448450 HIST1H2BHQ93079 126 aa15.34■□□□□ 0.05
HTATSF1-203ENST00000448450 HIST1H2BNQ99877 126 aa15.34■□□□□ 0.05
HTATSF1-203ENST00000448450 HIST1H2BMQ99879 126 aa15.34■□□□□ 0.05
HTATSF1-203ENST00000448450 ERG28Q9UKR5 140 aa15.33■□□□□ 0.04
HTATSF1-203ENST00000448450 IGLV7-43P04211 117 aa15.31■□□□□ 0.04
HTATSF1-203ENST00000448450 LBHQ53QV2 105 aaPredicted RBP15.31■□□□□ 0.04
HTATSF1-203ENST00000448450 REG3GQ6UW15 175 aa15.29■□□□□ 0.04
HTATSF1-203ENST00000448450 MRPL55Q7Z7F7 128 aaKnown RBP15.29■□□□□ 0.04
HTATSF1-203ENST00000448450 PMCHL2Q9BQD1 86 aa15.29■□□□□ 0.04
HTATSF1-203ENST00000448450 SFTA2Q6UW10 78 aa15.28■□□□□ 0.04
HTATSF1-203ENST00000448450 LINC01600Q96MT4 127 aa15.28■□□□□ 0.04
HTATSF1-203ENST00000448450 SND1-IT1Q9HBX3 110 aa15.27■□□□□ 0.04
HTATSF1-203ENST00000448450 COX17Q14061 63 aa15.26■□□□□ 0.03
HTATSF1-203ENST00000448450 TP73-AS1Q9UF72 201 aa15.26■□□□□ 0.03
HTATSF1-203ENST00000448450 A0A0U1RRA0 63 aa15.25■□□□□ 0.03
HTATSF1-203ENST00000448450 GAGE10A6NGK3 116 aa15.25■□□□□ 0.03
HTATSF1-203ENST00000448450 LINC00158P58513 81 aa15.25■□□□□ 0.03
HTATSF1-203ENST00000448450 LINC00167Q96N53 147 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms