RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 CFAP54Q96N23 3096 aa11.74□□□□□ -0.53
TCOF1-206ENST00000445265 FHL3Q13643 280 aa11.74□□□□□ -0.53
TCOF1-206ENST00000445265 SHISA2Q6UWI4 295 aa11.73□□□□□ -0.53
TCOF1-206ENST00000445265 TRBV7-7A0A0K0K1E9 115 aa11.73□□□□□ -0.53
TCOF1-206ENST00000445265 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-206ENST00000445265 KLK5Q9Y337 293 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-206ENST00000445265 ZNF73O43830 326 aaPredicted RBP11.72□□□□□ -0.53
TCOF1-206ENST00000445265 FSHBP01225 129 aa11.72□□□□□ -0.53
TCOF1-206ENST00000445265 C9orf116Q5BN46 136 aaPredicted RBP11.72□□□□□ -0.53
TCOF1-206ENST00000445265 LITAFQ99732 161 aa11.72□□□□□ -0.53
TCOF1-206ENST00000445265 PRR3P79522 188 aaKnown RBP11.71□□□□□ -0.54
TCOF1-206ENST00000445265 CDH23Q9H251 3354 aa11.7□□□□□ -0.54
TCOF1-206ENST00000445265 A8MTW9 85 aa11.7□□□□□ -0.54
TCOF1-206ENST00000445265 SOSTDC1Q6X4U4 206 aa11.7□□□□□ -0.54
TCOF1-206ENST00000445265 PLA2G2AP14555 144 aa11.69□□□□□ -0.54
TCOF1-206ENST00000445265 SCXQ7RTU7 201 aa11.69□□□□□ -0.54
TCOF1-206ENST00000445265 FAM236DA0A1B0GTK5 79 aa11.69□□□□□ -0.54
TCOF1-206ENST00000445265 FAM236CP0DP71 79 aa11.69□□□□□ -0.54
TCOF1-206ENST00000445265 ZNF575Q86XF7 245 aa11.69□□□□□ -0.54
TCOF1-206ENST00000445265 IGHV4-30-4P0DP06 118 aa11.69□□□□□ -0.54
TCOF1-206ENST00000445265 ACANP16112 2415 aa11.68□□□□□ -0.54
TCOF1-206ENST00000445265 MP68P56378 58 aa11.67□□□□□ -0.54
TCOF1-206ENST00000445265 EGFEM1PQ0D2K5 195 aa11.67□□□□□ -0.54
TCOF1-206ENST00000445265 TRBV10-3A0A0K0K1G6 114 aa11.65□□□□□ -0.54
TCOF1-206ENST00000445265 SMR3AQ99954 134 aa11.65□□□□□ -0.54
TCOF1-206ENST00000445265 A0A087WVE0 104 aa11.64□□□□□ -0.55
TCOF1-206ENST00000445265 LINC00846Q9NV44 126 aa11.64□□□□□ -0.55
TCOF1-206ENST00000445265 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.63□□□□□ -0.55
TCOF1-206ENST00000445265 WFDC9Q8NEX5 89 aa11.63□□□□□ -0.55
TCOF1-206ENST00000445265 DHRS4-AS1Q9P1J3 65 aa11.63□□□□□ -0.55
TCOF1-206ENST00000445265 IGKV2-28A0A075B6P5 120 aa11.62□□□□□ -0.55
TCOF1-206ENST00000445265 IGKV2D-28P01615 120 aa11.62□□□□□ -0.55
TCOF1-206ENST00000445265 UBE2AP49459 152 aa11.62□□□□□ -0.55
TCOF1-206ENST00000445265 NDUFB1O75438 58 aa11.61□□□□□ -0.55
TCOF1-206ENST00000445265 TRAV10A0A0B4J240 114 aa11.61□□□□□ -0.55
TCOF1-206ENST00000445265 FAM218AQ96MZ4 157 aa11.61□□□□□ -0.55
TCOF1-206ENST00000445265 NDUFC1O43677 76 aa11.61□□□□□ -0.55
TCOF1-206ENST00000445265 C14orf177Q52M58 125 aa11.61□□□□□ -0.55
TCOF1-206ENST00000445265 LINC00575Q6W349 94 aa11.61□□□□□ -0.55
TCOF1-206ENST00000445265 IGKV2-24A0A0C4DH68 120 aa11.6□□□□□ -0.55
TCOF1-206ENST00000445265 HIGD2AQ9BW72 106 aa11.59□□□□□ -0.55
TCOF1-206ENST00000445265 C3orf84H3BNL1 204 aa11.59□□□□□ -0.55
TCOF1-206ENST00000445265 C6orf223Q8N319 242 aa11.59□□□□□ -0.55
TCOF1-206ENST00000445265 FAM19A3Q7Z5A8 133 aa11.58□□□□□ -0.56
TCOF1-206ENST00000445265 EPG5Q9HCE0 2579 aa11.58□□□□□ -0.56
TCOF1-206ENST00000445265 FAM19A5Q7Z5A7 132 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-206ENST00000445265 TRAV7A0A075B6U4 112 aa11.57□□□□□ -0.56
TCOF1-206ENST00000445265 PPDPFQ9H3Y8 114 aa11.57□□□□□ -0.56
TCOF1-206ENST00000445265 MGAQ8IWI9 3026 aa11.56□□□□□ -0.56
TCOF1-206ENST00000445265 OXLD1Q5BKU9 147 aa11.56□□□□□ -0.56
TCOF1-206ENST00000445265 ZNF292O60281 2723 aa11.55□□□□□ -0.56
TCOF1-206ENST00000445265 FAM19A1Q7Z5A9 133 aa11.55□□□□□ -0.56
TCOF1-206ENST00000445265 A0A096LNT2 108 aa11.55□□□□□ -0.56
TCOF1-206ENST00000445265 ATP5EP56381 51 aaPredicted RBP11.55□□□□□ -0.56
TCOF1-206ENST00000445265 LYPD5Q6UWN5 251 aa11.55□□□□□ -0.56
TCOF1-206ENST00000445265 NDUFC2-KCTD14E9PQ53 114 aa11.54□□□□□ -0.56
TCOF1-206ENST00000445265 SNURFQ9Y675 71 aa11.53□□□□□ -0.56
TCOF1-206ENST00000445265 VPS13AQ96RL7 3174 aa11.53□□□□□ -0.56
TCOF1-206ENST00000445265 NANOS2P60321 138 aaKnown RBP11.53□□□□□ -0.56
TCOF1-206ENST00000445265 C2orf48Q96LS8 159 aa11.53□□□□□ -0.56
TCOF1-206ENST00000445265 B9D2Q9BPU9 175 aa11.53□□□□□ -0.56
TCOF1-206ENST00000445265 F8WDY8 70 aa11.52□□□□□ -0.56
TCOF1-206ENST00000445265 X6R8D5 127 aa11.52□□□□□ -0.56
TCOF1-206ENST00000445265 A0A0J9YWU9 116 aa11.52□□□□□ -0.57
TCOF1-206ENST00000445265 NDUFS5O43920 106 aa11.52□□□□□ -0.57
TCOF1-206ENST00000445265 XIRP2A4UGR9 3374 aa11.52□□□□□ -0.57
TCOF1-206ENST00000445265 C5orf47Q569G3 176 aa11.51□□□□□ -0.57
TCOF1-206ENST00000445265 Q6ZTC4 211 aa11.51□□□□□ -0.57
TCOF1-206ENST00000445265 WDFY4Q6ZS81 3184 aa11.51□□□□□ -0.57
TCOF1-206ENST00000445265 EIF4EBP3O60516 100 aaPredicted RBP11.51□□□□□ -0.57
TCOF1-206ENST00000445265 LOC107984640A0A0U1RRK4 108 aa11.51□□□□□ -0.57
TCOF1-206ENST00000445265 RPL37AP8A6NKH3 93 aa11.5□□□□□ -0.57
TCOF1-206ENST00000445265 RETNQ9HD89 108 aa11.5□□□□□ -0.57
TCOF1-206ENST00000445265 LAMA1P25391 3075 aa11.5□□□□□ -0.57
TCOF1-206ENST00000445265 Q6ZVQ6 151 aa11.49□□□□□ -0.57
TCOF1-206ENST00000445265 WFDC10BQ8IUB3 73 aa11.49□□□□□ -0.57
TCOF1-206ENST00000445265 IL17DQ8TAD2 202 aa11.49□□□□□ -0.57
TCOF1-206ENST00000445265 CELA1Q9UNI1 258 aa11.48□□□□□ -0.57
TCOF1-206ENST00000445265 Q8N3U1 123 aa11.47□□□□□ -0.57
TCOF1-206ENST00000445265 H0Y9J4 135 aa11.47□□□□□ -0.57
TCOF1-206ENST00000445265 LINC01547P58512 204 aaPredicted RBP11.45□□□□□ -0.58
TCOF1-206ENST00000445265 Q6ZRU5 148 aa11.45□□□□□ -0.58
TCOF1-206ENST00000445265 SZT2Q5T011 3432 aa11.45□□□□□ -0.58
TCOF1-206ENST00000445265 CRYGAP11844 174 aa11.45□□□□□ -0.58
TCOF1-206ENST00000445265 CSNK1G2-AS1Q8NCQ2 148 aa11.44□□□□□ -0.58
TCOF1-206ENST00000445265 FASNP49327 2511 aaKnown RBP11.43□□□□□ -0.58
TCOF1-206ENST00000445265 DNAH14Q0VDD8 3507 aa11.43□□□□□ -0.58
TCOF1-206ENST00000445265 C1orf137Q5JT78 98 aa11.43□□□□□ -0.58
TCOF1-206ENST00000445265 CXCL6P80162 114 aa11.42□□□□□ -0.58
TCOF1-206ENST00000445265 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.42□□□□□ -0.58
TCOF1-206ENST00000445265 PRB2P02812 416 aaPredicted RBP11.42□□□□□ -0.58
TCOF1-206ENST00000445265 C10orf25Q5T742 122 aa11.42□□□□□ -0.58
TCOF1-206ENST00000445265 C6orf48Q9UBA6 75 aa11.41□□□□□ -0.58
TCOF1-206ENST00000445265 SERP1Q9Y6X1 66 aa11.41□□□□□ -0.58
TCOF1-206ENST00000445265 A0A096LNI7 61 aa11.4□□□□□ -0.58
TCOF1-206ENST00000445265 GIG44P09565 113 aaPredicted RBP11.39□□□□□ -0.59
TCOF1-206ENST00000445265 BRK1Q8WUW1 75 aa11.39□□□□□ -0.59
TCOF1-206ENST00000445265 SMIM26A0A096LP01 95 aa11.38□□□□□ -0.59
TCOF1-206ENST00000445265 MPLKIPQ8TAP9 179 aa11.38□□□□□ -0.59
TCOF1-206ENST00000445265 PLAC8L1A1L4L8 177 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms