RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 C6orf48Q9UBA6 75 aa13.8□□□□□ -0.2
HDLBP-220ENST00000442730 A0A1W2PNN7 141 aa13.79□□□□□ -0.2
HDLBP-220ENST00000442730 PMVKQ15126 192 aa13.79□□□□□ -0.2
HDLBP-220ENST00000442730 LINC01561Q8N1V8 128 aa13.79□□□□□ -0.2
HDLBP-220ENST00000442730 CST9LQ9H4G1 147 aa13.79□□□□□ -0.2
HDLBP-220ENST00000442730 HSBP1O75506 76 aa13.77□□□□□ -0.21
HDLBP-220ENST00000442730 ATP5LO75964 103 aa13.77□□□□□ -0.21
HDLBP-220ENST00000442730 C9orf116Q5BN46 136 aaPredicted RBP13.77□□□□□ -0.21
HDLBP-220ENST00000442730 TLX1NBP0CAT3 122 aa13.76□□□□□ -0.21
HDLBP-220ENST00000442730 LINC00469Q8N7U9 141 aa13.76□□□□□ -0.21
HDLBP-220ENST00000442730 TINCRA0A1B0GVN0 87 aa13.75□□□□□ -0.21
HDLBP-220ENST00000442730 NDUFA6P56556 154 aa13.75□□□□□ -0.21
HDLBP-220ENST00000442730 C2orf82Q6UX34 121 aa13.75□□□□□ -0.21
HDLBP-220ENST00000442730 Q6ZRP5 223 aa13.75□□□□□ -0.21
HDLBP-220ENST00000442730 CDKN2A-AS1Q9UH64 79 aa13.75□□□□□ -0.21
HDLBP-220ENST00000442730 ATP6V1G1O75348 118 aa13.74□□□□□ -0.21
HDLBP-220ENST00000442730 SERF1AO75920 110 aa13.74□□□□□ -0.21
HDLBP-220ENST00000442730 PACRGQ96M98 296 aaPredicted RBP13.74□□□□□ -0.21
HDLBP-220ENST00000442730 TRBV30A0A0K0K1B3 111 aa13.73□□□□□ -0.21
HDLBP-220ENST00000442730 LINC00310P59036 64 aa13.73□□□□□ -0.21
HDLBP-220ENST00000442730 IGLV5-45A0A087WSX0 123 aa13.72□□□□□ -0.21
HDLBP-220ENST00000442730 FAM19A2Q8N3H0 131 aa13.72□□□□□ -0.21
HDLBP-220ENST00000442730 MT1HL1P0DM35 61 aa13.71□□□□□ -0.21
HDLBP-220ENST00000442730 S100A1P23297 94 aa13.71□□□□□ -0.21
HDLBP-220ENST00000442730 IGLC3P0DOY3 106 aa13.7□□□□□ -0.22
HDLBP-220ENST00000442730 FAM168BA1KXE4 195 aa13.69□□□□□ -0.22
HDLBP-220ENST00000442730 PRSS2P07478 247 aa13.69□□□□□ -0.22
HDLBP-220ENST00000442730 GAGE2EQ4V326 116 aa13.69□□□□□ -0.22
HDLBP-220ENST00000442730 Q8IZM0 81 aa13.69□□□□□ -0.22
HDLBP-220ENST00000442730 IFI27L1Q96BM0 104 aa13.69□□□□□ -0.22
HDLBP-220ENST00000442730 TOMM7Q9P0U1 55 aa13.69□□□□□ -0.22
HDLBP-220ENST00000442730 GAGE2DQ9UEU5 116 aa13.69□□□□□ -0.22
HDLBP-220ENST00000442730 SMIM1B2RUZ4 78 aa13.68□□□□□ -0.22
HDLBP-220ENST00000442730 PHF5AQ7RTV0 110 aaKnown RBP13.68□□□□□ -0.22
HDLBP-220ENST00000442730 HMCN2Q8NDA2 5059 aa13.67□□□□□ -0.22
HDLBP-220ENST00000442730 NDUFC2-KCTD14E9PQ53 114 aa13.67□□□□□ -0.22
HDLBP-220ENST00000442730 HIST1H2BKO60814 126 aa13.67□□□□□ -0.22
HDLBP-220ENST00000442730 HIST1H2BJP06899 126 aa13.67□□□□□ -0.22
HDLBP-220ENST00000442730 HIST1H2BOP23527 126 aa13.67□□□□□ -0.22
HDLBP-220ENST00000442730 HIST1H2BBP33778 126 aa13.67□□□□□ -0.22
HDLBP-220ENST00000442730 HIST1H2BDP58876 126 aa13.67□□□□□ -0.22
HDLBP-220ENST00000442730 HIST1H2BCP62807 126 aa13.67□□□□□ -0.22
HDLBP-220ENST00000442730 HIST2H2BEQ16778 126 aa13.67□□□□□ -0.22
HDLBP-220ENST00000442730 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.67□□□□□ -0.22
HDLBP-220ENST00000442730 HIST1H2BHQ93079 126 aa13.67□□□□□ -0.22
HDLBP-220ENST00000442730 HIST1H2BNQ99877 126 aa13.67□□□□□ -0.22
HDLBP-220ENST00000442730 HIST1H2BMQ99879 126 aa13.67□□□□□ -0.22
HDLBP-220ENST00000442730 H3BRM9 83 aa13.66□□□□□ -0.22
HDLBP-220ENST00000442730 SPINK8P0C7L1 97 aa13.66□□□□□ -0.22
HDLBP-220ENST00000442730 CKS1BP61024 79 aa13.66□□□□□ -0.22
HDLBP-220ENST00000442730 SPINK6Q6UWN8 80 aa13.66□□□□□ -0.22
HDLBP-220ENST00000442730 TNXBP22105 4242 aa13.66□□□□□ -0.22
HDLBP-220ENST00000442730 C6orf226Q5I0X4 101 aa13.65□□□□□ -0.22
HDLBP-220ENST00000442730 FAM19A5Q7Z5A7 132 aaPredicted RBP13.65□□□□□ -0.22
HDLBP-220ENST00000442730 PSORS1C2Q9UIG4 136 aa13.65□□□□□ -0.22
HDLBP-220ENST00000442730 NUPR1O60356 82 aa13.64□□□□□ -0.23
HDLBP-220ENST00000442730 LEPROTL1O95214 131 aa13.64□□□□□ -0.23
HDLBP-220ENST00000442730 ZNF22P17026 224 aaPredicted RBP13.64□□□□□ -0.23
HDLBP-220ENST00000442730 SRSF9Q13242 221 aaKnown RBP eCLIP13.64□□□□□ -0.23
HDLBP-220ENST00000442730 SERTAD4-AS1Q5TG53 156 aa13.64□□□□□ -0.23
HDLBP-220ENST00000442730 KRTAP7-1Q8IUC3 87 aa13.64□□□□□ -0.23
HDLBP-220ENST00000442730 CHTOPQ9Y3Y2 248 aaKnown RBP13.64□□□□□ -0.23
HDLBP-220ENST00000442730 TRAV12-1A0A0B4J245 112 aa13.63□□□□□ -0.23
HDLBP-220ENST00000442730 C11orf86A6NJI1 115 aa13.63□□□□□ -0.23
HDLBP-220ENST00000442730 C9orf129Q5T035 196 aaKnown RBP13.63□□□□□ -0.23
HDLBP-220ENST00000442730 F8VRH5 84 aa13.61□□□□□ -0.23
HDLBP-220ENST00000442730 CXCL5P42830 114 aa13.61□□□□□ -0.23
HDLBP-220ENST00000442730 COX7B2Q8TF08 81 aa13.61□□□□□ -0.23
HDLBP-220ENST00000442730 HSPB8Q9UJY1 196 aa13.61□□□□□ -0.23
HDLBP-220ENST00000442730 H0Y8G0 127 aa13.6□□□□□ -0.23
HDLBP-220ENST00000442730 KRTAP11-1Q8IUC1 163 aa13.6□□□□□ -0.23
HDLBP-220ENST00000442730 LINC01600Q96MT4 127 aa13.6□□□□□ -0.23
HDLBP-220ENST00000442730 M0QXV9 152 aa13.59□□□□□ -0.23
HDLBP-220ENST00000442730 TMEM170BQ5T4T1 132 aa13.59□□□□□ -0.23
HDLBP-220ENST00000442730 FABP4P15090 132 aa13.58□□□□□ -0.24
HDLBP-220ENST00000442730 C1orf137Q5JT78 98 aa13.58□□□□□ -0.24
HDLBP-220ENST00000442730 IGLV5-39A0A0G2JS06 123 aa13.57□□□□□ -0.24
HDLBP-220ENST00000442730 REG3GQ6UW15 175 aa13.57□□□□□ -0.24
HDLBP-220ENST00000442730 ODF1Q14990 250 aa13.56□□□□□ -0.24
HDLBP-220ENST00000442730 XAGE1AQ9HD64 81 aa13.54□□□□□ -0.24
HDLBP-220ENST00000442730 IGLV7-43P04211 117 aa13.52□□□□□ -0.25
HDLBP-220ENST00000442730 PLA2G2DQ9UNK4 145 aa13.52□□□□□ -0.25
HDLBP-220ENST00000442730 UBE2BP63146 152 aa13.51□□□□□ -0.25
HDLBP-220ENST00000442730 COA6Q5JTJ3 125 aaKnown RBP13.51□□□□□ -0.25
HDLBP-220ENST00000442730 TMEM223A0PJW6 202 aa13.5□□□□□ -0.25
HDLBP-220ENST00000442730 MAP1LC3CQ9BXW4 147 aa13.5□□□□□ -0.25
HDLBP-220ENST00000442730 PLNP26678 52 aa13.49□□□□□ -0.25
HDLBP-220ENST00000442730 KRTAP10-8P60410 259 aa13.48□□□□□ -0.25
HDLBP-220ENST00000442730 PMCHL2Q9BQD1 86 aa13.47□□□□□ -0.25
HDLBP-220ENST00000442730 C22orf24Q9Y442 160 aa13.47□□□□□ -0.25
HDLBP-220ENST00000442730 DPM2O94777 84 aa13.46□□□□□ -0.25
HDLBP-220ENST00000442730 DIRC1Q969H9 104 aa13.45□□□□□ -0.26
HDLBP-220ENST00000442730 SFTA2Q6UW10 78 aa13.44□□□□□ -0.26
HDLBP-220ENST00000442730 TP73-AS1Q9UF72 201 aa13.44□□□□□ -0.26
HDLBP-220ENST00000442730 SYS1-DBNDD2H3BUS1 97 aa13.43□□□□□ -0.26
HDLBP-220ENST00000442730 IGKCP01834 107 aa13.43□□□□□ -0.26
HDLBP-220ENST00000442730 H0Y9J4 135 aa13.42□□□□□ -0.26
HDLBP-220ENST00000442730 LBHQ53QV2 105 aaPredicted RBP13.42□□□□□ -0.26
HDLBP-220ENST00000442730 ZNF625Q96I27 306 aaPredicted RBP13.42□□□□□ -0.26
HDLBP-220ENST00000442730 MRPL55Q7Z7F7 128 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms