RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 FOXA3P55318 350 aaPredicted RBP1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 WT1-ASQ06250 92 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 Q0VG73 95 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 LDLRAD2Q5SZI1 272 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 MIC13Q5XKP0 118 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 HCP5Q6MZN7 132 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 RASL11AQ6T310 242 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 PATE2Q6UY27 113 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 GPHB5Q86YW7 130 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 TTC9CQ8N5M4 171 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 FER1L6-AS1Q8NA97 138 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 ST20-AS1Q8NBB2 130 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 OR10D4PQ8NGN7 298 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 OR2T10Q8NGZ9 312 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 TOMM6Q96B49 74 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 SMIM7Q9BQ49 75 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 C2orf88Q9BSF0 95 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 OSTCQ9NRP0 149 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 SS18L2Q9UHA2 77 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 MRPS16Q9Y3D3 137 aaKnown RBP1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 ZNF706Q9Y5V0 76 aaPredicted RBP1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 TRBV20OR9-2A0A075B6H5 130 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 SMIM27A0A1W2PRY6 76 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 GGTLC3B5MD39 225 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 K7EIM0 57 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 LST1O00453 97 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 COX7A2LO14548 114 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 HIST1H2BKO60814 126 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 IGHV3-7P01780 117 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 MT-ND6P03923 174 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 TRGC2P03986 189 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 MT1FP04733 61 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 HIST1H2BJP06899 126 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 CTSGP08311 255 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 CXCL1P09341 107 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 IGLC1P0CG04 106 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 IGLC2P0DOY2 106 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 HIST1H2BOP23527 126 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 S100PP25815 95 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 BRS3P32247 399 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 HIST1H2BBP33778 126 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 RPL35P42766 123 aaKnown RBP1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 HIST1H2BDP58876 126 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 CKS1BP61024 79 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 HIST1H2BCP62807 126 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 PDE6HQ13956 83 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 DIAPH2-AS1Q14236 149 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 HIST2H2BEQ16778 126 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 LTC4SQ16873 150 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 C10orf113Q5VZT2 155 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 MIR17HGQ75NE6 70 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 HIST3H2BBQ8N257 126 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 EXOC3-AS1Q8N2X6 119 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 ZFAND2AQ8N6M9 145 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 C5orf17Q8NAS9 161 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 H1FXQ92522 213 aaKnown RBP1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 HIST1H2BHQ93079 126 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 LEAP2Q969E1 77 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 IGF2BP2-AS1Q96M15 143 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 HIST1H2BNQ99877 126 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 HIST1H2BMQ99879 126 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 SHANK2-AS3Q9BTD1 123 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 XAGE1AQ9HD64 81 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 OTORQ9NRC9 128 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 IL36BQ9NZH7 164 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 MRPL36Q9P0J6 103 aaKnown RBP1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 EPDR1Q9UM22 224 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 ZFP30Q9Y2G7 519 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 LAMTOR2Q9Y2Q5 125 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 V9GYV3 84 aa1.1□□□□□ -2.23
HMGB1P18-201ENST00000438801 TRBV7-1A0A0A6YYK4 115 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 TRAV5A0A0B4J249 113 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 RBAKDNA6NC62 111 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 C19orf71A6NCJ1 209 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 FAM223BA6NKX1 122 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 A8MWP6 167 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 LINC00587B1AMM8 73 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 H3BRN7 92 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 H3BUA1 57 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 DLEU1O43261 78 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 TCRAP04437 139 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 SLC25A5P05141 298 aaKnown RBP1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 TRGC1P0CF51 173 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 ZNF705DP0CH99 300 aaPredicted RBP1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 RPL7P18124 248 aaKnown RBP1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 CRYBB3P26998 211 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 S100A2P29034 98 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 ATP5G3P48201 142 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 GNG4P50150 75 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 EMP1P54849 157 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 NDUFA6P56556 154 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 TSPEAR-AS2P59090 65 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 ZNF90Q03938 601 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 FXYD3Q14802 87 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 ADIRFQ15847 76 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 TPRXLQ17RH7 258 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 LUZP6Q538Z0 58 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 SPINK9Q5DT21 86 aa1.09□□□□□ -2.23
HMGB1P18-201ENST00000438801 C10orf55Q5SWW7 151 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 466.2 ms