RNA–Protein interactions for RNA: ENST00000436493.2

SDHAP3-201, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene SDHAP3, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP3-201ENST00000436493 A0A1W2PNN7 141 aa13.45□□□□□ -0.26
SDHAP3-201ENST00000436493 PMCHL1Q16048 86 aa13.45□□□□□ -0.26
SDHAP3-201ENST00000436493 C9orf116Q5BN46 136 aaPredicted RBP13.45□□□□□ -0.26
SDHAP3-201ENST00000436493 KRTAP29-1A8MX34 341 aaPredicted RBP13.44□□□□□ -0.26
SDHAP3-201ENST00000436493 HNRNPA3P51991 378 aaKnown RBP13.44□□□□□ -0.26
SDHAP3-201ENST00000436493 GAGE2EQ4V326 116 aa13.44□□□□□ -0.26
SDHAP3-201ENST00000436493 Q6ZRP5 223 aa13.44□□□□□ -0.26
SDHAP3-201ENST00000436493 GAGE2DQ9UEU5 116 aa13.44□□□□□ -0.26
SDHAP3-201ENST00000436493 IGLV5-45A0A087WSX0 123 aa13.43□□□□□ -0.26
SDHAP3-201ENST00000436493 ATP5LO75964 103 aa13.43□□□□□ -0.26
SDHAP3-201ENST00000436493 PDZD11Q5EBL8 140 aa13.43□□□□□ -0.26
SDHAP3-201ENST00000436493 MYCBP2O75592 4640 aa13.42□□□□□ -0.26
SDHAP3-201ENST00000436493 CHCHD1Q96BP2 118 aaKnown RBP13.42□□□□□ -0.26
SDHAP3-201ENST00000436493 SMIM1B2RUZ4 78 aa13.41□□□□□ -0.26
SDHAP3-201ENST00000436493 NDUFC2-KCTD14E9PQ53 114 aa13.41□□□□□ -0.26
SDHAP3-201ENST00000436493 H3BRM9 83 aa13.41□□□□□ -0.26
SDHAP3-201ENST00000436493 OXTP01178 125 aa13.41□□□□□ -0.26
SDHAP3-201ENST00000436493 PRR3P79522 188 aaKnown RBP13.41□□□□□ -0.26
SDHAP3-201ENST00000436493 CXCL5P42830 114 aa13.4□□□□□ -0.26
SDHAP3-201ENST00000436493 COX7B2Q8TF08 81 aa13.4□□□□□ -0.26
SDHAP3-201ENST00000436493 F8VRH5 84 aa13.39□□□□□ -0.27
SDHAP3-201ENST00000436493 SPINK8P0C7L1 97 aa13.39□□□□□ -0.27
SDHAP3-201ENST00000436493 TRGC2P03986 189 aa13.38□□□□□ -0.27
SDHAP3-201ENST00000436493 IGLC3P0DOY3 106 aa13.38□□□□□ -0.27
SDHAP3-201ENST00000436493 BAGE3Q86Y29 109 aa13.38□□□□□ -0.27
SDHAP3-201ENST00000436493 PHF5AQ7RTV0 110 aaKnown RBP13.36□□□□□ -0.27
SDHAP3-201ENST00000436493 FAM168BA1KXE4 195 aa13.35□□□□□ -0.27
SDHAP3-201ENST00000436493 HSBP1O75506 76 aa13.35□□□□□ -0.27
SDHAP3-201ENST00000436493 FAM19A5Q7Z5A7 132 aaPredicted RBP13.35□□□□□ -0.27
SDHAP3-201ENST00000436493 ZNF22P17026 224 aaPredicted RBP13.32□□□□□ -0.28
SDHAP3-201ENST00000436493 IFI27L1Q96BM0 104 aa13.32□□□□□ -0.28
SDHAP3-201ENST00000436493 COLCA2A8K830 154 aa13.31□□□□□ -0.28
SDHAP3-201ENST00000436493 C9orf129Q5T035 196 aaKnown RBP13.31□□□□□ -0.28
SDHAP3-201ENST00000436493 CHTOPQ9Y3Y2 248 aaKnown RBP13.31□□□□□ -0.28
SDHAP3-201ENST00000436493 TMEM170BQ5T4T1 132 aa13.3□□□□□ -0.28
SDHAP3-201ENST00000436493 FAM19A2Q8N3H0 131 aa13.3□□□□□ -0.28
SDHAP3-201ENST00000436493 PSORS1C2Q9UIG4 136 aa13.3□□□□□ -0.28
SDHAP3-201ENST00000436493 C11orf86A6NJI1 115 aa13.29□□□□□ -0.28
SDHAP3-201ENST00000436493 M0QXV9 152 aa13.29□□□□□ -0.28
SDHAP3-201ENST00000436493 TRAV12-1A0A0B4J245 112 aa13.28□□□□□ -0.28
SDHAP3-201ENST00000436493 IGLV5-39A0A0G2JS06 123 aa13.28□□□□□ -0.28
SDHAP3-201ENST00000436493 SPINK6Q6UWN8 80 aa13.28□□□□□ -0.28
SDHAP3-201ENST00000436493 XAGE1AQ9HD64 81 aa13.28□□□□□ -0.28
SDHAP3-201ENST00000436493 PKHD1L1Q86WI1 4243 aa13.27□□□□□ -0.29
SDHAP3-201ENST00000436493 SERF1AO75920 110 aa13.26□□□□□ -0.29
SDHAP3-201ENST00000436493 UBE2BP63146 152 aa13.26□□□□□ -0.29
SDHAP3-201ENST00000436493 C1orf137Q5JT78 98 aa13.26□□□□□ -0.29
SDHAP3-201ENST00000436493 KRTAP7-1Q8IUC3 87 aa13.26□□□□□ -0.29
SDHAP3-201ENST00000436493 LRP1Q07954 4544 aaKnown RBP13.24□□□□□ -0.29
SDHAP3-201ENST00000436493 SRSF9Q13242 221 aaKnown RBP eCLIP13.24□□□□□ -0.29
SDHAP3-201ENST00000436493 HERC1Q15751 4861 aa13.23□□□□□ -0.29
SDHAP3-201ENST00000436493 LEPROTL1O95214 131 aa13.23□□□□□ -0.29
SDHAP3-201ENST00000436493 SERTAD4-AS1Q5TG53 156 aa13.22□□□□□ -0.29
SDHAP3-201ENST00000436493 REG3GQ6UW15 175 aa13.22□□□□□ -0.29
SDHAP3-201ENST00000436493 SCO1O75880 301 aa13.21□□□□□ -0.29
SDHAP3-201ENST00000436493 LBHQ53QV2 105 aaPredicted RBP13.21□□□□□ -0.29
SDHAP3-201ENST00000436493 C22orf24Q9Y442 160 aa13.21□□□□□ -0.29
SDHAP3-201ENST00000436493 H0Y8G0 127 aa13.2□□□□□ -0.3
SDHAP3-201ENST00000436493 LINC00310P59036 64 aa13.2□□□□□ -0.3
SDHAP3-201ENST00000436493 SFTA2Q6UW10 78 aa13.2□□□□□ -0.3
SDHAP3-201ENST00000436493 KRTAP11-1Q8IUC1 163 aa13.2□□□□□ -0.3
SDHAP3-201ENST00000436493 FAT3Q8TDW7 4589 aa13.19□□□□□ -0.3
SDHAP3-201ENST00000436493 PFN2P35080 140 aa13.19□□□□□ -0.3
SDHAP3-201ENST00000436493 HSPB8Q9UJY1 196 aa13.19□□□□□ -0.3
SDHAP3-201ENST00000436493 TMEM223A0PJW6 202 aa13.18□□□□□ -0.3
SDHAP3-201ENST00000436493 IGLV7-43P04211 117 aa13.18□□□□□ -0.3
SDHAP3-201ENST00000436493 NUPR1O60356 82 aa13.17□□□□□ -0.3
SDHAP3-201ENST00000436493 FABP4P15090 132 aa13.17□□□□□ -0.3
SDHAP3-201ENST00000436493 ZNF625Q96I27 306 aaPredicted RBP13.17□□□□□ -0.3
SDHAP3-201ENST00000436493 ERG28Q9UKR5 140 aa13.17□□□□□ -0.3
SDHAP3-201ENST00000436493 COX17Q14061 63 aa13.16□□□□□ -0.3
SDHAP3-201ENST00000436493 ODF1Q14990 250 aa13.16□□□□□ -0.3
SDHAP3-201ENST00000436493 LINC01600Q96MT4 127 aa13.16□□□□□ -0.3
SDHAP3-201ENST00000436493 TP73-AS1Q9UF72 201 aa13.16□□□□□ -0.3
SDHAP3-201ENST00000436493 PLA2G2DQ9UNK4 145 aa13.16□□□□□ -0.3
SDHAP3-201ENST00000436493 MT1HL1P0DM35 61 aa13.15□□□□□ -0.3
SDHAP3-201ENST00000436493 MRPL55Q7Z7F7 128 aaKnown RBP13.15□□□□□ -0.3
SDHAP3-201ENST00000436493 NKAPP1Q8N9T2 125 aa13.13□□□□□ -0.31
SDHAP3-201ENST00000436493 DIRC1Q969H9 104 aa13.13□□□□□ -0.31
SDHAP3-201ENST00000436493 HIST1H2BKO60814 126 aa13.11□□□□□ -0.31
SDHAP3-201ENST00000436493 HIST1H2BJP06899 126 aa13.11□□□□□ -0.31
SDHAP3-201ENST00000436493 HIST1H2BOP23527 126 aa13.11□□□□□ -0.31
SDHAP3-201ENST00000436493 HIST1H2BBP33778 126 aa13.11□□□□□ -0.31
SDHAP3-201ENST00000436493 HIST1H2BDP58876 126 aa13.11□□□□□ -0.31
SDHAP3-201ENST00000436493 HIST1H2BCP62807 126 aa13.11□□□□□ -0.31
SDHAP3-201ENST00000436493 HIST2H2BEQ16778 126 aa13.11□□□□□ -0.31
SDHAP3-201ENST00000436493 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.11□□□□□ -0.31
SDHAP3-201ENST00000436493 HIST1H2BHQ93079 126 aa13.11□□□□□ -0.31
SDHAP3-201ENST00000436493 HIST1H2BNQ99877 126 aa13.11□□□□□ -0.31
SDHAP3-201ENST00000436493 HIST1H2BMQ99879 126 aa13.11□□□□□ -0.31
SDHAP3-201ENST00000436493 SND1-IT1Q9HBX3 110 aa13.11□□□□□ -0.31
SDHAP3-201ENST00000436493 PLNP26678 52 aa13.1□□□□□ -0.31
SDHAP3-201ENST00000436493 LINC00167Q96N53 147 aa13.1□□□□□ -0.31
SDHAP3-201ENST00000436493 IGLV5-37A0A075B6J1 123 aa13.09□□□□□ -0.31
SDHAP3-201ENST00000436493 LINC00158P58513 81 aa13.09□□□□□ -0.31
SDHAP3-201ENST00000436493 MAP1LC3CQ9BXW4 147 aa13.09□□□□□ -0.31
SDHAP3-201ENST00000436493 GAGE10A6NGK3 116 aa13.08□□□□□ -0.32
SDHAP3-201ENST00000436493 DPM2O94777 84 aa13.08□□□□□ -0.32
SDHAP3-201ENST00000436493 RPL37AP8A6NKH3 93 aa13.07□□□□□ -0.32
SDHAP3-201ENST00000436493 RPL24P83731 157 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms