RNA–Protein interactions for RNA: ENST00000435197.2

SMG1P3-201, Transcript of SMG1 pseudogene 3, humanhuman

TSL 3

Gene SMG1P3, Length 416 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-201ENST00000435197 PET117Q6UWS5 81 aa11.61□□□□□ -0.55
SMG1P3-201ENST00000435197 LINC01561Q8N1V8 128 aa11.61□□□□□ -0.55
SMG1P3-201ENST00000435197 MRPL35Q9NZE8 188 aaKnown RBP11.61□□□□□ -0.55
SMG1P3-201ENST00000435197 IGLV4-69A0A075B6H9 119 aa11.6□□□□□ -0.55
SMG1P3-201ENST00000435197 IGLV5-45A0A087WSX0 123 aa11.6□□□□□ -0.55
SMG1P3-201ENST00000435197 IGHV1-58A0A0C4DH39 117 aa11.6□□□□□ -0.55
SMG1P3-201ENST00000435197 C3orf79P0CE67 100 aa11.6□□□□□ -0.55
SMG1P3-201ENST00000435197 KRTDAPP60985 99 aa11.6□□□□□ -0.55
SMG1P3-201ENST00000435197 Q6ZRU5 148 aa11.6□□□□□ -0.55
SMG1P3-201ENST00000435197 LINC00469Q8N7U9 141 aa11.6□□□□□ -0.55
SMG1P3-201ENST00000435197 LRP2P98164 4655 aa11.6□□□□□ -0.55
SMG1P3-201ENST00000435197 USP17L23D6RBM5 183 aa11.59□□□□□ -0.55
SMG1P3-201ENST00000435197 H3BRM9 83 aa11.59□□□□□ -0.55
SMG1P3-201ENST00000435197 CDKN2A-AS1Q9UH64 79 aa11.59□□□□□ -0.55
SMG1P3-201ENST00000435197 PLNP26678 52 aa11.58□□□□□ -0.56
SMG1P3-201ENST00000435197 C20orf202A1L168 122 aa11.57□□□□□ -0.56
SMG1P3-201ENST00000435197 C11orf86A6NJI1 115 aa11.57□□□□□ -0.56
SMG1P3-201ENST00000435197 DPM2O94777 84 aa11.57□□□□□ -0.56
SMG1P3-201ENST00000435197 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.57□□□□□ -0.56
SMG1P3-201ENST00000435197 AKR1D1P51857 326 aa11.56□□□□□ -0.56
SMG1P3-201ENST00000435197 TMEM170BQ5T4T1 132 aa11.56□□□□□ -0.56
SMG1P3-201ENST00000435197 LINC01545Q5VT33 79 aa11.56□□□□□ -0.56
SMG1P3-201ENST00000435197 IGHV3-64A0A075B6Q5 118 aa11.55□□□□□ -0.56
SMG1P3-201ENST00000435197 IGKCP01834 107 aa11.55□□□□□ -0.56
SMG1P3-201ENST00000435197 ZNF22P17026 224 aaPredicted RBP11.55□□□□□ -0.56
SMG1P3-201ENST00000435197 C15orf56Q8N910 161 aa11.55□□□□□ -0.56
SMG1P3-201ENST00000435197 OR10D4PQ8NGN7 298 aa11.55□□□□□ -0.56
SMG1P3-201ENST00000435197 GVQW2A0A096LPI5 108 aaPredicted RBP11.54□□□□□ -0.56
SMG1P3-201ENST00000435197 hDV102S1A0JD36 115 aa11.54□□□□□ -0.56
SMG1P3-201ENST00000435197 PANO1I0J062 215 aa11.54□□□□□ -0.56
SMG1P3-201ENST00000435197 ZNF561-AS1K7EIQ3 104 aa11.54□□□□□ -0.56
SMG1P3-201ENST00000435197 TNXBP22105 4242 aa11.53□□□□□ -0.56
SMG1P3-201ENST00000435197 C9orf163Q8N9P6 203 aa11.53□□□□□ -0.56
SMG1P3-201ENST00000435197 ORAOV1Q8WV07 137 aa11.53□□□□□ -0.56
SMG1P3-201ENST00000435197 PMCHL2Q9BQD1 86 aa11.53□□□□□ -0.56
SMG1P3-201ENST00000435197 SMIM1B2RUZ4 78 aa11.51□□□□□ -0.57
SMG1P3-201ENST00000435197 SPINK8P0C7L1 97 aa11.51□□□□□ -0.57
SMG1P3-201ENST00000435197 HIGD2BQ4VC39 106 aa11.51□□□□□ -0.57
SMG1P3-201ENST00000435197 F8WDY8 70 aa11.5□□□□□ -0.57
SMG1P3-201ENST00000435197 PRSS2P07478 247 aa11.5□□□□□ -0.57
SMG1P3-201ENST00000435197 SPAG11BQ08648 103 aa11.5□□□□□ -0.57
SMG1P3-201ENST00000435197 TMEM223A0PJW6 202 aa11.49□□□□□ -0.57
SMG1P3-201ENST00000435197 C6orf226Q5I0X4 101 aa11.49□□□□□ -0.57
SMG1P3-201ENST00000435197 C2orf48Q96LS8 159 aa11.49□□□□□ -0.57
SMG1P3-201ENST00000435197 IGLV5-39A0A0G2JS06 123 aa11.48□□□□□ -0.57
SMG1P3-201ENST00000435197 HERVK_113P61574 105 aa11.48□□□□□ -0.57
SMG1P3-201ENST00000435197 SDIM1Q6ZPB5 146 aa11.48□□□□□ -0.57
SMG1P3-201ENST00000435197 Q8IZM0 81 aa11.48□□□□□ -0.57
SMG1P3-201ENST00000435197 TOMM7Q9P0U1 55 aa11.48□□□□□ -0.57
SMG1P3-201ENST00000435197 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.47□□□□□ -0.57
SMG1P3-201ENST00000435197 CNBPP62633 177 aaKnown RBP11.47□□□□□ -0.57
SMG1P3-201ENST00000435197 CIRBPQ14011 172 aaKnown RBP11.47□□□□□ -0.57
SMG1P3-201ENST00000435197 COX7B2Q8TF08 81 aa11.47□□□□□ -0.57
SMG1P3-201ENST00000435197 SCGB1D1O95968 90 aa11.46□□□□□ -0.57
SMG1P3-201ENST00000435197 CKS1BP61024 79 aa11.46□□□□□ -0.57
SMG1P3-201ENST00000435197 KIAA0087Q14695 138 aa11.46□□□□□ -0.57
SMG1P3-201ENST00000435197 CAMK2N2Q96S95 79 aa11.46□□□□□ -0.57
SMG1P3-201ENST00000435197 LINC00526Q96FQ7 95 aa11.45□□□□□ -0.58
SMG1P3-201ENST00000435197 NDUFA1O15239 70 aa11.44□□□□□ -0.58
SMG1P3-201ENST00000435197 CXCL5P42830 114 aa11.44□□□□□ -0.58
SMG1P3-201ENST00000435197 SYCNQ0VAF6 134 aa11.44□□□□□ -0.58
SMG1P3-201ENST00000435197 SLPIP03973 132 aa11.43□□□□□ -0.58
SMG1P3-201ENST00000435197 PLEKHB2Q96CS7 222 aa11.43□□□□□ -0.58
SMG1P3-201ENST00000435197 LEPROTO15243 131 aa11.42□□□□□ -0.58
SMG1P3-201ENST00000435197 CARD19Q96LW7 228 aa11.42□□□□□ -0.58
SMG1P3-201ENST00000435197 LINC01600Q96MT4 127 aa11.42□□□□□ -0.58
SMG1P3-201ENST00000435197 SFTA2Q6UW10 78 aa11.41□□□□□ -0.58
SMG1P3-201ENST00000435197 ATOH7Q8N100 152 aa11.41□□□□□ -0.58
SMG1P3-201ENST00000435197 STPG4Q8N801 248 aa11.41□□□□□ -0.58
SMG1P3-201ENST00000435197 A0A087WYN8 130 aa11.4□□□□□ -0.58
SMG1P3-201ENST00000435197 E9PLD3 99 aa11.4□□□□□ -0.58
SMG1P3-201ENST00000435197 JOSD1Q15040 202 aaPredicted RBP11.4□□□□□ -0.58
SMG1P3-201ENST00000435197 RNF151Q2KHN1 245 aa11.4□□□□□ -0.58
SMG1P3-201ENST00000435197 UNQ6190/PRO20217Q6UXQ8 127 aa11.4□□□□□ -0.58
SMG1P3-201ENST00000435197 TRBV30A0A0K0K1B3 111 aa11.39□□□□□ -0.59
SMG1P3-201ENST00000435197 HSBP1L1C9JCN9 74 aa11.39□□□□□ -0.59
SMG1P3-201ENST00000435197 CHTF8P0CG12 524 aa11.39□□□□□ -0.59
SMG1P3-201ENST00000435197 C2orf82Q6UX34 121 aa11.39□□□□□ -0.59
SMG1P3-201ENST00000435197 PKIGQ9Y2B9 76 aa11.39□□□□□ -0.59
SMG1P3-201ENST00000435197 J3QQQ9 107 aa11.38□□□□□ -0.59
SMG1P3-201ENST00000435197 SPACA4Q8TDM5 124 aa11.38□□□□□ -0.59
SMG1P3-201ENST00000435197 DPH3Q96FX2 82 aa11.38□□□□□ -0.59
SMG1P3-201ENST00000435197 LGALS3P17931 250 aaKnown RBP11.37□□□□□ -0.59
SMG1P3-201ENST00000435197 C10orf25Q5T742 122 aa11.37□□□□□ -0.59
SMG1P3-201ENST00000435197 NMUP48645 174 aa11.36□□□□□ -0.59
SMG1P3-201ENST00000435197 MYMXA0A1B0GTQ4 84 aa11.35□□□□□ -0.59
SMG1P3-201ENST00000435197 C7orf33Q8WU49 177 aa11.35□□□□□ -0.59
SMG1P3-201ENST00000435197 ZNF625Q96I27 306 aaPredicted RBP11.35□□□□□ -0.59
SMG1P3-201ENST00000435197 PLAC8Q9NZF1 115 aa11.35□□□□□ -0.59
SMG1P3-201ENST00000435197 C6orf48Q9UBA6 75 aa11.35□□□□□ -0.59
SMG1P3-201ENST00000435197 NDUFA12Q9UI09 145 aa11.35□□□□□ -0.59
SMG1P3-201ENST00000435197 HERV-K104P63124 156 aa11.34□□□□□ -0.59
SMG1P3-201ENST00000435197 LOC107984640A0A0U1RRK4 108 aa11.33□□□□□ -0.6
SMG1P3-201ENST00000435197 TSPEAR-AS2P59090 65 aa11.33□□□□□ -0.6
SMG1P3-201ENST00000435197 LINC00587B1AMM8 73 aa11.32□□□□□ -0.6
SMG1P3-201ENST00000435197 ANKRD39Q53RE8 183 aa11.32□□□□□ -0.6
SMG1P3-201ENST00000435197 IGKV2D-26A0A0A0MRZ7 120 aa11.31□□□□□ -0.6
SMG1P3-201ENST00000435197 TLX1NBP0CAT3 122 aa11.31□□□□□ -0.6
SMG1P3-201ENST00000435197 KRTAP10-8P60410 259 aa11.31□□□□□ -0.6
SMG1P3-201ENST00000435197 PRR3P79522 188 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms