RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 LINC00482Q8N8I6 264 aa8.2□□□□□ -1.1
CD44-209ENST00000433892 MRPL23Q16540 153 aaKnown RBP8.2□□□□□ -1.1
CD44-209ENST00000433892 LINC00612Q8N6U2 182 aa8.2□□□□□ -1.1
CD44-209ENST00000433892 X6R8D5 127 aa8.2□□□□□ -1.1
CD44-209ENST00000433892 HECTD1Q9ULT8 2610 aa8.2□□□□□ -1.1
CD44-209ENST00000433892 OTOGQ6ZRI0 2925 aa8.19□□□□□ -1.1
CD44-209ENST00000433892 A0A087WYN8 130 aa8.19□□□□□ -1.1
CD44-209ENST00000433892 PAX4O43316 350 aa8.19□□□□□ -1.1
CD44-209ENST00000433892 SPATA3Q8NHX4 192 aa8.19□□□□□ -1.1
CD44-209ENST00000433892 PRO0255Q9UI72 69 aa8.18□□□□□ -1.1
CD44-209ENST00000433892 DEFB4AO15263 64 aa8.18□□□□□ -1.1
CD44-209ENST00000433892 SS18Q15532 418 aa8.18□□□□□ -1.1
CD44-209ENST00000433892 TRRAPQ9Y4A5 3859 aa8.17□□□□□ -1.1
CD44-209ENST00000433892 A0A1B0GUV1 79 aa8.17□□□□□ -1.1
CD44-209ENST00000433892 ACYP1P07311 99 aa8.17□□□□□ -1.1
CD44-209ENST00000433892 MALP21145 153 aa8.17□□□□□ -1.1
CD44-209ENST00000433892 OR13C6PQ8NH95 151 aa8.17□□□□□ -1.1
CD44-209ENST00000433892 ATP5G1P05496 136 aa8.17□□□□□ -1.1
CD44-209ENST00000433892 SMCR5Q8TEV8 140 aa8.17□□□□□ -1.1
CD44-209ENST00000433892 DNAL4O96015 105 aa8.16□□□□□ -1.1
CD44-209ENST00000433892 TRBV7-7A0A0K0K1E9 115 aa8.15□□□□□ -1.1
CD44-209ENST00000433892 B5MCH6 92 aa8.15□□□□□ -1.1
CD44-209ENST00000433892 DEFB135Q30KP9 77 aa8.15□□□□□ -1.1
CD44-209ENST00000433892 LINC00269Q8N2A0 174 aa8.15□□□□□ -1.1
CD44-209ENST00000433892 Q8N3U1 123 aa8.15□□□□□ -1.1
CD44-209ENST00000433892 SMIM9A6NGZ8 99 aa8.14□□□□□ -1.11
CD44-209ENST00000433892 CCDC179H3BU77 68 aa8.14□□□□□ -1.11
CD44-209ENST00000433892 J3QKU1 62 aa8.14□□□□□ -1.11
CD44-209ENST00000433892 Q8IZM0 81 aa8.14□□□□□ -1.11
CD44-209ENST00000433892 H0YGX0 51 aa8.14□□□□□ -1.11
CD44-209ENST00000433892 C9orf129Q5T035 196 aaKnown RBP8.14□□□□□ -1.11
CD44-209ENST00000433892 GAGE2AQ6NT46 116 aa8.14□□□□□ -1.11
CD44-209ENST00000433892 NSD1Q96L73 2696 aaPredicted RBP8.13□□□□□ -1.11
CD44-209ENST00000433892 IGLV10-54A0A075B6I4 117 aa8.13□□□□□ -1.11
CD44-209ENST00000433892 LECT2O14960 151 aa8.13□□□□□ -1.11
CD44-209ENST00000433892 INAFM2P0DMQ5 153 aa8.13□□□□□ -1.11
CD44-209ENST00000433892 ATRQ13535 2644 aa8.13□□□□□ -1.11
CD44-209ENST00000433892 LYRM9A8MSI8 78 aa8.12□□□□□ -1.11
CD44-209ENST00000433892 LY6G6DO95868 133 aa8.12□□□□□ -1.11
CD44-209ENST00000433892 PRR3P79522 188 aaKnown RBP8.12□□□□□ -1.11
CD44-209ENST00000433892 KMT2BQ9UMN6 2715 aaPredicted RBP8.12□□□□□ -1.11
CD44-209ENST00000433892 SLPIP03973 132 aa8.12□□□□□ -1.11
CD44-209ENST00000433892 LINC00643Q86TS7 51 aa8.12□□□□□ -1.11
CD44-209ENST00000433892 ANGP03950 147 aaKnown RBP8.11□□□□□ -1.11
CD44-209ENST00000433892 CHCHD10Q8WYQ3 142 aaPredicted RBP8.11□□□□□ -1.11
CD44-209ENST00000433892 SS18L2Q9UHA2 77 aa8.11□□□□□ -1.11
CD44-209ENST00000433892 IGHV4-28A0A0C4DH34 117 aa8.1□□□□□ -1.11
CD44-209ENST00000433892 KIAA0087Q14695 138 aa8.1□□□□□ -1.11
CD44-209ENST00000433892 C9orf66Q5T8R8 295 aa8.1□□□□□ -1.11
CD44-209ENST00000433892 CD164L2Q6UWJ8 174 aa8.1□□□□□ -1.11
CD44-209ENST00000433892 C14orf132Q9NPU4 83 aa8.1□□□□□ -1.11
CD44-209ENST00000433892 FAM236AA0A1B0GUQ0 79 aa8.1□□□□□ -1.11
CD44-209ENST00000433892 FAM236BA0A1B0GV22 79 aa8.1□□□□□ -1.11
CD44-209ENST00000433892 SDIM1Q6ZPB5 146 aa8.1□□□□□ -1.11
CD44-209ENST00000433892 DAD1P61803 113 aa8.09□□□□□ -1.11
CD44-209ENST00000433892 REG3AQ06141 175 aa8.09□□□□□ -1.11
CD44-209ENST00000433892 C9orf116Q5BN46 136 aaPredicted RBP8.09□□□□□ -1.11
CD44-209ENST00000433892 HIVEP1P15822 2718 aa8.09□□□□□ -1.11
CD44-209ENST00000433892 CFAP161Q6P656 301 aa8.09□□□□□ -1.11
CD44-209ENST00000433892 LINC01561Q8N1V8 128 aa8.09□□□□□ -1.11
CD44-209ENST00000433892 IMUPQ9GZP8 106 aa8.09□□□□□ -1.11
CD44-209ENST00000433892 CELA1Q9UNI1 258 aa8.09□□□□□ -1.11
CD44-209ENST00000433892 TEP1Q99973 2627 aaKnown RBP8.08□□□□□ -1.12
CD44-209ENST00000433892 NCR3O14931 201 aa8.08□□□□□ -1.12
CD44-209ENST00000433892 INAFM1C9JVW0 142 aa8.08□□□□□ -1.12
CD44-209ENST00000433892 NANOS2P60321 138 aaKnown RBP8.08□□□□□ -1.12
CD44-209ENST00000433892 HTN3P15516 51 aa8.07□□□□□ -1.12
CD44-209ENST00000433892 APOC4P55056 127 aa8.07□□□□□ -1.12
CD44-209ENST00000433892 OBSCN-AS1Q96MR7 158 aa8.06□□□□□ -1.12
CD44-209ENST00000433892 COX17Q14061 63 aa8.05□□□□□ -1.12
CD44-209ENST00000433892 Q8NAQ8 132 aa8.05□□□□□ -1.12
CD44-209ENST00000433892 ORMDL1Q9P0S3 153 aa8.05□□□□□ -1.12
CD44-209ENST00000433892 KLK5Q9Y337 293 aaPredicted RBP8.05□□□□□ -1.12
CD44-209ENST00000433892 CXCL5P42830 114 aa8.05□□□□□ -1.12
CD44-209ENST00000433892 Q8NDZ9 215 aa8.05□□□□□ -1.12
CD44-209ENST00000433892 C6orf223Q8N319 242 aa8.04□□□□□ -1.12
CD44-209ENST00000433892 LINC00526Q96FQ7 95 aa8.04□□□□□ -1.12
CD44-209ENST00000433892 NDUFC2O95298 119 aa8.04□□□□□ -1.12
CD44-209ENST00000433892 TMEM126AQ9H061 195 aa8.04□□□□□ -1.12
CD44-209ENST00000433892 C10orf25Q5T742 122 aa8.03□□□□□ -1.12
CD44-209ENST00000433892 Q8N814 137 aa8.03□□□□□ -1.12
CD44-209ENST00000433892 LINC00846Q9NV44 126 aa8.03□□□□□ -1.12
CD44-209ENST00000433892 MIFP14174 115 aa8.03□□□□□ -1.12
CD44-209ENST00000433892 UNQ6190/PRO20217Q6UXQ8 127 aa8.03□□□□□ -1.12
CD44-209ENST00000433892 SPART-AS1P0CW21 52 aa8.02□□□□□ -1.13
CD44-209ENST00000433892 SPAG11BQ08648 103 aa8.01□□□□□ -1.13
CD44-209ENST00000433892 KLK12Q9UKR0 248 aa8.01□□□□□ -1.13
CD44-209ENST00000433892 PKD1L1Q8TDX9 2849 aa8.01□□□□□ -1.13
CD44-209ENST00000433892 C6orf99Q4VX62 202 aa8.01□□□□□ -1.13
CD44-209ENST00000433892 LELP1Q5T871 98 aa8.01□□□□□ -1.13
CD44-209ENST00000433892 C3orf56Q8N813 242 aa8.01□□□□□ -1.13
CD44-209ENST00000433892 LINC00167Q96N53 147 aa8.01□□□□□ -1.13
CD44-209ENST00000433892 ANK2Q01484 3957 aa8□□□□□ -1.13
CD44-209ENST00000433892 IGKV3D-7A0A0C4DH55 119 aa8□□□□□ -1.13
CD44-209ENST00000433892 CYSRT1A8MQ03 144 aa8□□□□□ -1.13
CD44-209ENST00000433892 IGHV4-30-4P0DP06 118 aa8□□□□□ -1.13
CD44-209ENST00000433892 S100A7L2Q5SY68 101 aa8□□□□□ -1.13
CD44-209ENST00000433892 A0A1B0GX51 115 aa7.99□□□□□ -1.13
CD44-209ENST00000433892 TMEM256-PLSCR3K7ERE1 68 aa7.98□□□□□ -1.13
CD44-209ENST00000433892 ENHOQ6UWT2 76 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms