RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 C2orf82Q6UX34 121 aa17.36■□□□□ 0.37
TMEM248-205ENST00000433271 C2orf48Q96LS8 159 aa17.36■□□□□ 0.37
TMEM248-205ENST00000433271 BOD1L2Q8IYS8 172 aa17.36■□□□□ 0.37
TMEM248-205ENST00000433271 HYDINQ4G0P3 5121 aa17.35■□□□□ 0.37
TMEM248-205ENST00000433271 F8WDY8 70 aa17.35■□□□□ 0.37
TMEM248-205ENST00000433271 DLEU1O43261 78 aa17.35■□□□□ 0.37
TMEM248-205ENST00000433271 RTL8CO15255 209 aa17.34■□□□□ 0.37
TMEM248-205ENST00000433271 SLC25A34Q6PIV7 304 aa17.33■□□□□ 0.37
TMEM248-205ENST00000433271 A0A087WTM6 91 aa17.32■□□□□ 0.36
TMEM248-205ENST00000433271 HERV-K104P63124 156 aa17.32■□□□□ 0.36
TMEM248-205ENST00000433271 CAMK2N2Q96S95 79 aa17.32■□□□□ 0.36
TMEM248-205ENST00000433271 PRO1933Q9H354 126 aa17.32■□□□□ 0.36
TMEM248-205ENST00000433271 UNQ6190/PRO20217Q6UXQ8 127 aa17.31■□□□□ 0.36
TMEM248-205ENST00000433271 C10orf25Q5T742 122 aa17.29■□□□□ 0.36
TMEM248-205ENST00000433271 TP73-AS1Q9UF72 201 aa17.29■□□□□ 0.36
TMEM248-205ENST00000433271 SLPIP03973 132 aa17.29■□□□□ 0.36
TMEM248-205ENST00000433271 SYCNQ0VAF6 134 aa17.29■□□□□ 0.36
TMEM248-205ENST00000433271 UQCR10Q9UDW1 63 aa17.29■□□□□ 0.36
TMEM248-205ENST00000433271 Q8N814 137 aa17.28■□□□□ 0.36
TMEM248-205ENST00000433271 A0A0J9YXY3 114 aa17.27■□□□□ 0.36
TMEM248-205ENST00000433271 SCGB1D4Q6XE38 83 aa17.27■□□□□ 0.36
TMEM248-205ENST00000433271 KMT2CQ8NEZ4 4911 aaKnown RBP17.27■□□□□ 0.35
TMEM248-205ENST00000433271 TSTD3H0UI37 97 aa17.26■□□□□ 0.35
TMEM248-205ENST00000433271 TNP2Q05952 138 aa17.26■□□□□ 0.35
TMEM248-205ENST00000433271 Q6ZRU5 148 aa17.26■□□□□ 0.35
TMEM248-205ENST00000433271 MIEN1Q9BRT3 115 aa17.25■□□□□ 0.35
TMEM248-205ENST00000433271 TRBV30A0A0K0K1B3 111 aa17.25■□□□□ 0.35
TMEM248-205ENST00000433271 CNBPP62633 177 aaKnown RBP17.25■□□□□ 0.35
TMEM248-205ENST00000433271 C6orf48Q9UBA6 75 aa17.25■□□□□ 0.35
TMEM248-205ENST00000433271 CARD19Q96LW7 228 aa17.24■□□□□ 0.35
TMEM248-205ENST00000433271 DNAH17Q9UFH2 4485 aa17.23■□□□□ 0.35
TMEM248-205ENST00000433271 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.22■□□□□ 0.35
TMEM248-205ENST00000433271 LINC00587B1AMM8 73 aa17.22■□□□□ 0.35
TMEM248-205ENST00000433271 EREGO14944 169 aa17.22■□□□□ 0.35
TMEM248-205ENST00000433271 ERG28Q9UKR5 140 aa17.22■□□□□ 0.35
TMEM248-205ENST00000433271 RNF151Q2KHN1 245 aa17.21■□□□□ 0.35
TMEM248-205ENST00000433271 MEIG1Q5JSS6 88 aa17.21■□□□□ 0.35
TMEM248-205ENST00000433271 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.21■□□□□ 0.35
TMEM248-205ENST00000433271 CIRBPQ14011 172 aaKnown RBP17.21■□□□□ 0.35
TMEM248-205ENST00000433271 C9orf116Q5BN46 136 aaPredicted RBP17.21■□□□□ 0.35
TMEM248-205ENST00000433271 TIMM17BO60830 172 aa17.2■□□□□ 0.34
TMEM248-205ENST00000433271 COX17Q14061 63 aa17.19■□□□□ 0.34
TMEM248-205ENST00000433271 C2orf91Q6ZV80 131 aa17.19■□□□□ 0.34
TMEM248-205ENST00000433271 HIGD1BQ9P298 99 aa17.19■□□□□ 0.34
TMEM248-205ENST00000433271 FRAS1Q86XX4 4008 aa17.18■□□□□ 0.34
TMEM248-205ENST00000433271 SMIM13P0DJ93 91 aa17.18■□□□□ 0.34
TMEM248-205ENST00000433271 LITAFQ99732 161 aa17.18■□□□□ 0.34
TMEM248-205ENST00000433271 RYR2Q92736 4967 aa17.17■□□□□ 0.34
TMEM248-205ENST00000433271 PFN2P35080 140 aa17.17■□□□□ 0.34
TMEM248-205ENST00000433271 LINC00158P58513 81 aa17.16■□□□□ 0.34
TMEM248-205ENST00000433271 LINC00336Q6ZUF6 198 aa17.16■□□□□ 0.34
TMEM248-205ENST00000433271 A0A0U1RRA0 63 aa17.15■□□□□ 0.34
TMEM248-205ENST00000433271 TMEM238C9JI98 176 aa17.15■□□□□ 0.34
TMEM248-205ENST00000433271 ADAMTSL4-AS1Q5T5F5 129 aa17.15■□□□□ 0.34
TMEM248-205ENST00000433271 HNRNPA3P51991 378 aaKnown RBP17.14■□□□□ 0.33
TMEM248-205ENST00000433271 C9orf163Q8N9P6 203 aa17.12■□□□□ 0.33
TMEM248-205ENST00000433271 SPANXB1Q9NS25 103 aaPredicted RBP17.12■□□□□ 0.33
TMEM248-205ENST00000433271 NDUFC2-KCTD14E9PQ53 114 aa17.11■□□□□ 0.33
TMEM248-205ENST00000433271 TLX1NBP0CAT3 122 aa17.1■□□□□ 0.33
TMEM248-205ENST00000433271 SRSF9Q13242 221 aaKnown RBP eCLIP17.1■□□□□ 0.33
TMEM248-205ENST00000433271 MIR7-3HGQ8N6C7 128 aa17.1■□□□□ 0.33
TMEM248-205ENST00000433271 DAND5Q8N907 189 aa17.1■□□□□ 0.33
TMEM248-205ENST00000433271 SPANXDQ9BXN6 97 aa17.1■□□□□ 0.33
TMEM248-205ENST00000433271 SPANXCQ9NY87 97 aa17.1■□□□□ 0.33
TMEM248-205ENST00000433271 Q6ZVH6 145 aa17.09■□□□□ 0.33
TMEM248-205ENST00000433271 DDTP30046 118 aa17.08■□□□□ 0.32
TMEM248-205ENST00000433271 FAT2Q9NYQ8 4349 aa17.08■□□□□ 0.32
TMEM248-205ENST00000433271 IGLV5-52A0A0A0MRZ9 124 aa17.07■□□□□ 0.32
TMEM248-205ENST00000433271 HIST1H4GQ99525 98 aa17.07■□□□□ 0.32
TMEM248-205ENST00000433271 LOC107984640A0A0U1RRK4 108 aa17.06■□□□□ 0.32
TMEM248-205ENST00000433271 Q6ZRP5 223 aa17.06■□□□□ 0.32
TMEM248-205ENST00000433271 PGPEP1Q9NXJ5 209 aa17.05■□□□□ 0.32
TMEM248-205ENST00000433271 FUSP35637 526 aaKnown RBP eCLIP17.04■□□□□ 0.32
TMEM248-205ENST00000433271 TAL2Q16559 108 aa17.04■□□□□ 0.32
TMEM248-205ENST00000433271 SND1-IT1Q9HBX3 110 aa17.04■□□□□ 0.32
TMEM248-205ENST00000433271 PTTG1IPP53801 180 aa17.03■□□□□ 0.32
TMEM248-205ENST00000433271 KRTAP10-2P60368 255 aa17.03■□□□□ 0.32
TMEM248-205ENST00000433271 RPL18AQ02543 176 aaKnown RBP17.03■□□□□ 0.32
TMEM248-205ENST00000433271 PKIGQ9Y2B9 76 aa17.03■□□□□ 0.32
TMEM248-205ENST00000433271 IFITM1P13164 125 aa17.03■□□□□ 0.32
TMEM248-205ENST00000433271 CTAG1AP78358 180 aa17.02■□□□□ 0.31
TMEM248-205ENST00000433271 HSD52Q0P140 79 aa17.02■□□□□ 0.31
TMEM248-205ENST00000433271 LINC01620Q4KN68 170 aa17.02■□□□□ 0.31
TMEM248-205ENST00000433271 GAGE2EQ4V326 116 aa17.02■□□□□ 0.31
TMEM248-205ENST00000433271 LINC00308Q8TCZ7 52 aa17.02■□□□□ 0.31
TMEM248-205ENST00000433271 GAGE2DQ9UEU5 116 aa17.02■□□□□ 0.31
TMEM248-205ENST00000433271 GCSHP23434 173 aa17.01■□□□□ 0.31
TMEM248-205ENST00000433271 SDIM1Q6ZPB5 146 aa17.01■□□□□ 0.31
TMEM248-205ENST00000433271 NPC2P61916 151 aa17■□□□□ 0.31
TMEM248-205ENST00000433271 MUSTN1Q8IVN3 82 aa17■□□□□ 0.31
TMEM248-205ENST00000433271 COPS9Q8WXC6 57 aa17■□□□□ 0.31
TMEM248-205ENST00000433271 PCP4L1A6NKN8 68 aa16.99■□□□□ 0.31
TMEM248-205ENST00000433271 LOC107984156A0A0G2JMH3 177 aa16.99■□□□□ 0.31
TMEM248-205ENST00000433271 EIF4EBP3O60516 100 aaPredicted RBP16.99■□□□□ 0.31
TMEM248-205ENST00000433271 GAGE2BQ13066 116 aa16.99■□□□□ 0.31
TMEM248-205ENST00000433271 SOSTDC1Q6X4U4 206 aa16.99■□□□□ 0.31
TMEM248-205ENST00000433271 ARL17AQ8IVW1 177 aa16.99■□□□□ 0.31
TMEM248-205ENST00000433271 XAGE1AQ9HD64 81 aa16.99■□□□□ 0.31
TMEM248-205ENST00000433271 C16orf90A8MZG2 172 aa16.98■□□□□ 0.31
TMEM248-205ENST00000433271 PPDPFQ9H3Y8 114 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms