RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 BAGE3Q86Y29 109 aa10.98□□□□□ -0.65
CTDSP1-203ENST00000431127 C7orf33Q8WU49 177 aa10.98□□□□□ -0.65
CTDSP1-203ENST00000431127 TOMM7Q9P0U1 55 aa10.98□□□□□ -0.65
CTDSP1-203ENST00000431127 C6orf48Q9UBA6 75 aa10.97□□□□□ -0.65
CTDSP1-203ENST00000431127 H3BRM9 83 aa10.96□□□□□ -0.65
CTDSP1-203ENST00000431127 TLX1NBP0CAT3 122 aa10.96□□□□□ -0.65
CTDSP1-203ENST00000431127 C2orf82Q6UX34 121 aa10.96□□□□□ -0.65
CTDSP1-203ENST00000431127 DMBT1Q9UGM3 2413 aaPredicted RBP10.96□□□□□ -0.66
CTDSP1-203ENST00000431127 SMIM1B2RUZ4 78 aa10.95□□□□□ -0.66
CTDSP1-203ENST00000431127 HSBP1O75506 76 aa10.95□□□□□ -0.66
CTDSP1-203ENST00000431127 IGLC3P0DOY3 106 aa10.95□□□□□ -0.66
CTDSP1-203ENST00000431127 KRTAP10-4P60372 401 aaPredicted RBP10.95□□□□□ -0.66
CTDSP1-203ENST00000431127 CXCL5P42830 114 aa10.94□□□□□ -0.66
CTDSP1-203ENST00000431127 FLG2Q5D862 2391 aaPredicted RBP10.94□□□□□ -0.66
CTDSP1-203ENST00000431127 NDUFC2-KCTD14E9PQ53 114 aa10.92□□□□□ -0.66
CTDSP1-203ENST00000431127 F8VRH5 84 aa10.92□□□□□ -0.66
CTDSP1-203ENST00000431127 Q6ZRP5 223 aa10.92□□□□□ -0.66
CTDSP1-203ENST00000431127 COX7B2Q8TF08 81 aa10.92□□□□□ -0.66
CTDSP1-203ENST00000431127 IFI27L1Q96BM0 104 aa10.92□□□□□ -0.66
CTDSP1-203ENST00000431127 MYCBP2O75592 4640 aa10.92□□□□□ -0.66
CTDSP1-203ENST00000431127 SPINK8P0C7L1 97 aa10.91□□□□□ -0.66
CTDSP1-203ENST00000431127 C9orf116Q5BN46 136 aaPredicted RBP10.91□□□□□ -0.66
CTDSP1-203ENST00000431127 GAGE2EQ4V326 116 aa10.9□□□□□ -0.66
CTDSP1-203ENST00000431127 FAM19A2Q8N3H0 131 aa10.9□□□□□ -0.66
CTDSP1-203ENST00000431127 GAGE2DQ9UEU5 116 aa10.9□□□□□ -0.66
CTDSP1-203ENST00000431127 TRAV12-1A0A0B4J245 112 aa10.89□□□□□ -0.67
CTDSP1-203ENST00000431127 A0A1W2PNN7 141 aa10.89□□□□□ -0.67
CTDSP1-203ENST00000431127 SCO1O75880 301 aa10.89□□□□□ -0.67
CTDSP1-203ENST00000431127 SERF1AO75920 110 aa10.89□□□□□ -0.67
CTDSP1-203ENST00000431127 ZNF22P17026 224 aaPredicted RBP10.89□□□□□ -0.67
CTDSP1-203ENST00000431127 CHTOPQ9Y3Y2 248 aaKnown RBP10.89□□□□□ -0.67
CTDSP1-203ENST00000431127 IGLV5-39A0A0G2JS06 123 aa10.86□□□□□ -0.67
CTDSP1-203ENST00000431127 C11orf86A6NJI1 115 aa10.86□□□□□ -0.67
CTDSP1-203ENST00000431127 LEPROTL1O95214 131 aa10.86□□□□□ -0.67
CTDSP1-203ENST00000431127 TMEM170BQ5T4T1 132 aa10.86□□□□□ -0.67
CTDSP1-203ENST00000431127 LINC00310P59036 64 aa10.85□□□□□ -0.67
CTDSP1-203ENST00000431127 HSPB8Q9UJY1 196 aa10.85□□□□□ -0.67
CTDSP1-203ENST00000431127 PRR3P79522 188 aaKnown RBP10.84□□□□□ -0.67
CTDSP1-203ENST00000431127 FAM168BA1KXE4 195 aa10.82□□□□□ -0.68
CTDSP1-203ENST00000431127 NUPR1O60356 82 aa10.82□□□□□ -0.68
CTDSP1-203ENST00000431127 C9orf129Q5T035 196 aaKnown RBP10.82□□□□□ -0.68
CTDSP1-203ENST00000431127 SFTA2Q6UW10 78 aa10.82□□□□□ -0.68
CTDSP1-203ENST00000431127 FAM19A5Q7Z5A7 132 aaPredicted RBP10.82□□□□□ -0.68
CTDSP1-203ENST00000431127 J3QL48 77 aa10.81□□□□□ -0.68
CTDSP1-203ENST00000431127 HIST1H2BKO60814 126 aa10.81□□□□□ -0.68
CTDSP1-203ENST00000431127 HIST1H2BJP06899 126 aa10.81□□□□□ -0.68
CTDSP1-203ENST00000431127 HIST1H2BOP23527 126 aa10.81□□□□□ -0.68
CTDSP1-203ENST00000431127 HIST1H2BBP33778 126 aa10.81□□□□□ -0.68
CTDSP1-203ENST00000431127 HNRNPA3P51991 378 aaKnown RBP10.81□□□□□ -0.68
CTDSP1-203ENST00000431127 HIST1H2BDP58876 126 aa10.81□□□□□ -0.68
CTDSP1-203ENST00000431127 HIST1H2BCP62807 126 aa10.81□□□□□ -0.68
CTDSP1-203ENST00000431127 HIST2H2BEQ16778 126 aa10.81□□□□□ -0.68
CTDSP1-203ENST00000431127 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.81□□□□□ -0.68
CTDSP1-203ENST00000431127 HIST1H2BHQ93079 126 aa10.81□□□□□ -0.68
CTDSP1-203ENST00000431127 HIST1H2BNQ99877 126 aa10.81□□□□□ -0.68
CTDSP1-203ENST00000431127 HIST1H2BMQ99879 126 aa10.81□□□□□ -0.68
CTDSP1-203ENST00000431127 KRTAP29-1A8MX34 341 aaPredicted RBP10.8□□□□□ -0.68
CTDSP1-203ENST00000431127 PHF5AQ7RTV0 110 aaKnown RBP10.8□□□□□ -0.68
CTDSP1-203ENST00000431127 TMEM223A0PJW6 202 aa10.79□□□□□ -0.68
CTDSP1-203ENST00000431127 H0Y8G0 127 aa10.79□□□□□ -0.68
CTDSP1-203ENST00000431127 FABP4P15090 132 aa10.79□□□□□ -0.68
CTDSP1-203ENST00000431127 ODF1Q14990 250 aa10.79□□□□□ -0.68
CTDSP1-203ENST00000431127 XAGE1AQ9HD64 81 aa10.79□□□□□ -0.68
CTDSP1-203ENST00000431127 M0QXV9 152 aa10.78□□□□□ -0.68
CTDSP1-203ENST00000431127 OXTP01178 125 aa10.78□□□□□ -0.68
CTDSP1-203ENST00000431127 S100A1P23297 94 aa10.78□□□□□ -0.68
CTDSP1-203ENST00000431127 PLNP26678 52 aa10.76□□□□□ -0.69
CTDSP1-203ENST00000431127 COX17Q14061 63 aa10.76□□□□□ -0.69
CTDSP1-203ENST00000431127 KRTAP7-1Q8IUC3 87 aa10.76□□□□□ -0.69
CTDSP1-203ENST00000431127 MAP1LC3CQ9BXW4 147 aa10.76□□□□□ -0.69
CTDSP1-203ENST00000431127 PSORS1C2Q9UIG4 136 aa10.76□□□□□ -0.69
CTDSP1-203ENST00000431127 PFN2P35080 140 aa10.74□□□□□ -0.69
CTDSP1-203ENST00000431127 UBE2BP63146 152 aa10.74□□□□□ -0.69
CTDSP1-203ENST00000431127 SPINK6Q6UWN8 80 aa10.74□□□□□ -0.69
CTDSP1-203ENST00000431127 ZNF625Q96I27 306 aaPredicted RBP10.74□□□□□ -0.69
CTDSP1-203ENST00000431127 ERG28Q9UKR5 140 aa10.74□□□□□ -0.69
CTDSP1-203ENST00000431127 DPM2O94777 84 aa10.73□□□□□ -0.69
CTDSP1-203ENST00000431127 LBHQ53QV2 105 aaPredicted RBP10.73□□□□□ -0.69
CTDSP1-203ENST00000431127 SERTAD4-AS1Q5TG53 156 aa10.73□□□□□ -0.69
CTDSP1-203ENST00000431127 PLA2G2DQ9UNK4 145 aa10.73□□□□□ -0.69
CTDSP1-203ENST00000431127 C22orf24Q9Y442 160 aa10.73□□□□□ -0.69
CTDSP1-203ENST00000431127 C1orf137Q5JT78 98 aa10.72□□□□□ -0.69
CTDSP1-203ENST00000431127 TP73-AS1Q9UF72 201 aa10.72□□□□□ -0.69
CTDSP1-203ENST00000431127 SRSF9Q13242 221 aaKnown RBP eCLIP10.71□□□□□ -0.69
CTDSP1-203ENST00000431127 IGKCP01834 107 aa10.7□□□□□ -0.7
CTDSP1-203ENST00000431127 COA6Q5JTJ3 125 aaKnown RBP10.7□□□□□ -0.7
CTDSP1-203ENST00000431127 ATP6V1G1O75348 118 aa10.69□□□□□ -0.7
CTDSP1-203ENST00000431127 HERVK_113P61574 105 aa10.69□□□□□ -0.7
CTDSP1-203ENST00000431127 HERV-K104P63124 156 aa10.69□□□□□ -0.7
CTDSP1-203ENST00000431127 MRPL55Q7Z7F7 128 aaKnown RBP10.69□□□□□ -0.7
CTDSP1-203ENST00000431127 LINC00587B1AMM8 73 aa10.68□□□□□ -0.7
CTDSP1-203ENST00000431127 KRTAP11-1Q8IUC1 163 aa10.68□□□□□ -0.7
CTDSP1-203ENST00000431127 PLEKHB2Q96CS7 222 aa10.68□□□□□ -0.7
CTDSP1-203ENST00000431127 PMCHL2Q9BQD1 86 aa10.68□□□□□ -0.7
CTDSP1-203ENST00000431127 SND1-IT1Q9HBX3 110 aa10.68□□□□□ -0.7
CTDSP1-203ENST00000431127 LRP1Q07954 4544 aaKnown RBP10.68□□□□□ -0.7
CTDSP1-203ENST00000431127 IGLV5-37A0A075B6J1 123 aa10.67□□□□□ -0.7
CTDSP1-203ENST00000431127 MYMXA0A1B0GTQ4 84 aa10.67□□□□□ -0.7
CTDSP1-203ENST00000431127 SYS1-DBNDD2H3BUS1 97 aa10.67□□□□□ -0.7
CTDSP1-203ENST00000431127 LEPROTO15243 131 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms