RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 LRP2P98164 4655 aa9.62□□□□□ -0.87
PTCD1-204ENST00000430982 TRGC2P03986 189 aa9.61□□□□□ -0.87
PTCD1-204ENST00000430982 PRSS2P07478 247 aa9.61□□□□□ -0.87
PTCD1-204ENST00000430982 PTTG1IPP53801 180 aa9.61□□□□□ -0.87
PTCD1-204ENST00000430982 RPL37AP61513 92 aaKnown RBP9.61□□□□□ -0.87
PTCD1-204ENST00000430982 KIAA0087Q14695 138 aa9.61□□□□□ -0.87
PTCD1-204ENST00000430982 RNF151Q2KHN1 245 aa9.61□□□□□ -0.87
PTCD1-204ENST00000430982 TINCRA0A1B0GVN0 87 aa9.6□□□□□ -0.87
PTCD1-204ENST00000430982 PDZD11Q5EBL8 140 aa9.6□□□□□ -0.87
PTCD1-204ENST00000430982 C2orf82Q6UX34 121 aa9.6□□□□□ -0.87
PTCD1-204ENST00000430982 BAGE3Q86Y29 109 aa9.59□□□□□ -0.87
PTCD1-204ENST00000430982 CHCHD1Q96BP2 118 aaKnown RBP9.59□□□□□ -0.87
PTCD1-204ENST00000430982 C6orf48Q9UBA6 75 aa9.59□□□□□ -0.87
PTCD1-204ENST00000430982 COLCA2A8K830 154 aa9.58□□□□□ -0.88
PTCD1-204ENST00000430982 ATP5LO75964 103 aa9.58□□□□□ -0.88
PTCD1-204ENST00000430982 C6orf226Q5I0X4 101 aa9.58□□□□□ -0.88
PTCD1-204ENST00000430982 SCO1O75880 301 aa9.57□□□□□ -0.88
PTCD1-204ENST00000430982 CKS1BP61024 79 aa9.57□□□□□ -0.88
PTCD1-204ENST00000430982 Q8IZM0 81 aa9.57□□□□□ -0.88
PTCD1-204ENST00000430982 C7orf33Q8WU49 177 aa9.57□□□□□ -0.88
PTCD1-204ENST00000430982 IGLV5-45A0A087WSX0 123 aa9.56□□□□□ -0.88
PTCD1-204ENST00000430982 TRBV30A0A0K0K1B3 111 aa9.56□□□□□ -0.88
PTCD1-204ENST00000430982 TNXBP22105 4242 aa9.55□□□□□ -0.88
PTCD1-204ENST00000430982 SMIM1B2RUZ4 78 aa9.55□□□□□ -0.88
PTCD1-204ENST00000430982 HSBP1O75506 76 aa9.55□□□□□ -0.88
PTCD1-204ENST00000430982 SPINK8P0C7L1 97 aa9.55□□□□□ -0.88
PTCD1-204ENST00000430982 IGLC3P0DOY3 106 aa9.55□□□□□ -0.88
PTCD1-204ENST00000430982 H3BRM9 83 aa9.54□□□□□ -0.88
PTCD1-204ENST00000430982 GAGE2EQ4V326 116 aa9.54□□□□□ -0.88
PTCD1-204ENST00000430982 GAGE2DQ9UEU5 116 aa9.54□□□□□ -0.88
PTCD1-204ENST00000430982 A0A1W2PNN7 141 aa9.53□□□□□ -0.88
PTCD1-204ENST00000430982 TLX1NBP0CAT3 122 aa9.53□□□□□ -0.88
PTCD1-204ENST00000430982 MT1HL1P0DM35 61 aa9.53□□□□□ -0.88
PTCD1-204ENST00000430982 C9orf116Q5BN46 136 aaPredicted RBP9.53□□□□□ -0.88
PTCD1-204ENST00000430982 Q6ZRP5 223 aa9.53□□□□□ -0.88
PTCD1-204ENST00000430982 FAM19A2Q8N3H0 131 aa9.53□□□□□ -0.88
PTCD1-204ENST00000430982 COX7B2Q8TF08 81 aa9.53□□□□□ -0.88
PTCD1-204ENST00000430982 IFI27L1Q96BM0 104 aa9.52□□□□□ -0.89
PTCD1-204ENST00000430982 F8VRH5 84 aa9.51□□□□□ -0.89
PTCD1-204ENST00000430982 SERF1AO75920 110 aa9.51□□□□□ -0.89
PTCD1-204ENST00000430982 ZNF22P17026 224 aaPredicted RBP9.51□□□□□ -0.89
PTCD1-204ENST00000430982 CXCL5P42830 114 aa9.51□□□□□ -0.89
PTCD1-204ENST00000430982 CHTOPQ9Y3Y2 248 aaKnown RBP9.51□□□□□ -0.89
PTCD1-204ENST00000430982 C11orf86A6NJI1 115 aa9.5□□□□□ -0.89
PTCD1-204ENST00000430982 NDUFC2-KCTD14E9PQ53 114 aa9.5□□□□□ -0.89
PTCD1-204ENST00000430982 HNRNPA3P51991 378 aaKnown RBP9.49□□□□□ -0.89
PTCD1-204ENST00000430982 LINC00310P59036 64 aa9.49□□□□□ -0.89
PTCD1-204ENST00000430982 TMEM170BQ5T4T1 132 aa9.49□□□□□ -0.89
PTCD1-204ENST00000430982 TRAV12-1A0A0B4J245 112 aa9.48□□□□□ -0.89
PTCD1-204ENST00000430982 FAM168BA1KXE4 195 aa9.48□□□□□ -0.89
PTCD1-204ENST00000430982 FAM19A5Q7Z5A7 132 aaPredicted RBP9.48□□□□□ -0.89
PTCD1-204ENST00000430982 H0Y8G0 127 aa9.47□□□□□ -0.89
PTCD1-204ENST00000430982 NUPR1O60356 82 aa9.47□□□□□ -0.89
PTCD1-204ENST00000430982 LEPROTL1O95214 131 aa9.47□□□□□ -0.89
PTCD1-204ENST00000430982 PRR3P79522 188 aaKnown RBP9.47□□□□□ -0.89
PTCD1-204ENST00000430982 PHF5AQ7RTV0 110 aaKnown RBP9.47□□□□□ -0.89
PTCD1-204ENST00000430982 IGLV5-39A0A0G2JS06 123 aa9.46□□□□□ -0.9
PTCD1-204ENST00000430982 C9orf129Q5T035 196 aaKnown RBP9.45□□□□□ -0.9
PTCD1-204ENST00000430982 FABP4P15090 132 aa9.44□□□□□ -0.9
PTCD1-204ENST00000430982 XAGE1AQ9HD64 81 aa9.44□□□□□ -0.9
PTCD1-204ENST00000430982 HSPB8Q9UJY1 196 aa9.44□□□□□ -0.9
PTCD1-204ENST00000430982 M0QXV9 152 aa9.42□□□□□ -0.9
PTCD1-204ENST00000430982 HIST1H2BKO60814 126 aa9.42□□□□□ -0.9
PTCD1-204ENST00000430982 HIST1H2BJP06899 126 aa9.42□□□□□ -0.9
PTCD1-204ENST00000430982 HIST1H2BOP23527 126 aa9.42□□□□□ -0.9
PTCD1-204ENST00000430982 HIST1H2BBP33778 126 aa9.42□□□□□ -0.9
PTCD1-204ENST00000430982 HIST1H2BDP58876 126 aa9.42□□□□□ -0.9
PTCD1-204ENST00000430982 HIST1H2BCP62807 126 aa9.42□□□□□ -0.9
PTCD1-204ENST00000430982 HIST2H2BEQ16778 126 aa9.42□□□□□ -0.9
PTCD1-204ENST00000430982 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.42□□□□□ -0.9
PTCD1-204ENST00000430982 HIST1H2BHQ93079 126 aa9.42□□□□□ -0.9
PTCD1-204ENST00000430982 HIST1H2BNQ99877 126 aa9.42□□□□□ -0.9
PTCD1-204ENST00000430982 HIST1H2BMQ99879 126 aa9.42□□□□□ -0.9
PTCD1-204ENST00000430982 TMEM223A0PJW6 202 aa9.41□□□□□ -0.9
PTCD1-204ENST00000430982 ODF1Q14990 250 aa9.41□□□□□ -0.9
PTCD1-204ENST00000430982 KRTAP7-1Q8IUC3 87 aa9.41□□□□□ -0.9
PTCD1-204ENST00000430982 PSORS1C2Q9UIG4 136 aa9.4□□□□□ -0.9
PTCD1-204ENST00000430982 PFN2P35080 140 aa9.39□□□□□ -0.91
PTCD1-204ENST00000430982 UBE2BP63146 152 aa9.39□□□□□ -0.91
PTCD1-204ENST00000430982 ZNF625Q96I27 306 aaPredicted RBP9.39□□□□□ -0.91
PTCD1-204ENST00000430982 C1orf137Q5JT78 98 aa9.38□□□□□ -0.91
PTCD1-204ENST00000430982 ERG28Q9UKR5 140 aa9.38□□□□□ -0.91
PTCD1-204ENST00000430982 S100A1P23297 94 aa9.37□□□□□ -0.91
PTCD1-204ENST00000430982 SFTA2Q6UW10 78 aa9.37□□□□□ -0.91
PTCD1-204ENST00000430982 KRTAP11-1Q8IUC1 163 aa9.37□□□□□ -0.91
PTCD1-204ENST00000430982 PMCHL2Q9BQD1 86 aa9.37□□□□□ -0.91
PTCD1-204ENST00000430982 MAP1LC3CQ9BXW4 147 aa9.37□□□□□ -0.91
PTCD1-204ENST00000430982 C22orf24Q9Y442 160 aa9.37□□□□□ -0.91
PTCD1-204ENST00000430982 ATP6V1G1O75348 118 aa9.35□□□□□ -0.91
PTCD1-204ENST00000430982 DPM2O94777 84 aa9.35□□□□□ -0.91
PTCD1-204ENST00000430982 PLNP26678 52 aa9.35□□□□□ -0.91
PTCD1-204ENST00000430982 SPINK6Q6UWN8 80 aa9.35□□□□□ -0.91
PTCD1-204ENST00000430982 LBHQ53QV2 105 aaPredicted RBP9.34□□□□□ -0.91
PTCD1-204ENST00000430982 IGKCP01834 107 aa9.33□□□□□ -0.92
PTCD1-204ENST00000430982 COX17Q14061 63 aa9.33□□□□□ -0.92
PTCD1-204ENST00000430982 LINC00158P58513 81 aa9.32□□□□□ -0.92
PTCD1-204ENST00000430982 HERVK_113P61574 105 aa9.32□□□□□ -0.92
PTCD1-204ENST00000430982 SRSF9Q13242 221 aaKnown RBP eCLIP9.32□□□□□ -0.92
PTCD1-204ENST00000430982 MRPL55Q7Z7F7 128 aaKnown RBP9.32□□□□□ -0.92
PTCD1-204ENST00000430982 SND1-IT1Q9HBX3 110 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms