RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 TM2D3Q9BRN9 247 aa14.81□□□□□ -0.04
CNEP1R1-202ENST00000427478 SCGB1C2P0DMR2 95 aa14.81□□□□□ -0.04
CNEP1R1-202ENST00000427478 MTURNQ8N3F0 131 aa14.81□□□□□ -0.04
CNEP1R1-202ENST00000427478 WFDC10BQ8IUB3 73 aa14.8□□□□□ -0.04
CNEP1R1-202ENST00000427478 Q8IZM0 81 aa14.8□□□□□ -0.04
CNEP1R1-202ENST00000427478 MIR7-3HGQ8N6C7 128 aa14.8□□□□□ -0.04
CNEP1R1-202ENST00000427478 TCL1BO95988 128 aa14.79□□□□□ -0.04
CNEP1R1-202ENST00000427478 FOXI1Q12951 378 aa14.79□□□□□ -0.04
CNEP1R1-202ENST00000427478 PRR34Q9NV39 138 aa14.79□□□□□ -0.04
CNEP1R1-202ENST00000427478 MALP21145 153 aa14.78□□□□□ -0.04
CNEP1R1-202ENST00000427478 LINC00158P58513 81 aa14.78□□□□□ -0.04
CNEP1R1-202ENST00000427478 RPL13AP40429 203 aaKnown RBP14.77□□□□□ -0.04
CNEP1R1-202ENST00000427478 ENHOQ6UWT2 76 aa14.77□□□□□ -0.04
CNEP1R1-202ENST00000427478 GAGE12HA6NDE8 117 aa14.77□□□□□ -0.05
CNEP1R1-202ENST00000427478 IBA57-AS1B1ANH7 110 aa14.77□□□□□ -0.05
CNEP1R1-202ENST00000427478 F8W1H4 67 aa14.77□□□□□ -0.05
CNEP1R1-202ENST00000427478 PFN2P35080 140 aa14.77□□□□□ -0.05
CNEP1R1-202ENST00000427478 ESRGQ1W209 222 aa14.77□□□□□ -0.05
CNEP1R1-202ENST00000427478 C2orf82Q6UX34 121 aa14.77□□□□□ -0.05
CNEP1R1-202ENST00000427478 TRIAP1O43715 76 aa14.75□□□□□ -0.05
CNEP1R1-202ENST00000427478 WFDC2Q14508 124 aa14.75□□□□□ -0.05
CNEP1R1-202ENST00000427478 OCIAD2Q56VL3 154 aa14.75□□□□□ -0.05
CNEP1R1-202ENST00000427478 PRO0461Q9UI25 63 aa14.75□□□□□ -0.05
CNEP1R1-202ENST00000427478 TRBV20-1A0A075B6N2 111 aa14.75□□□□□ -0.05
CNEP1R1-202ENST00000427478 CRPP02741 224 aa14.74□□□□□ -0.05
CNEP1R1-202ENST00000427478 KIAA0087Q14695 138 aa14.74□□□□□ -0.05
CNEP1R1-202ENST00000427478 UBE2WQ96B02 151 aa14.74□□□□□ -0.05
CNEP1R1-202ENST00000427478 CKS1BP61024 79 aa14.74□□□□□ -0.05
CNEP1R1-202ENST00000427478 CFAP161Q6P656 301 aa14.74□□□□□ -0.05
CNEP1R1-202ENST00000427478 TRBV30A0A0K0K1B3 111 aa14.73□□□□□ -0.05
CNEP1R1-202ENST00000427478 NBEAL1Q6ZS30 2694 aa14.73□□□□□ -0.05
CNEP1R1-202ENST00000427478 PPDPFQ9H3Y8 114 aa14.72□□□□□ -0.05
CNEP1R1-202ENST00000427478 TRAV10A0A0B4J240 114 aa14.71□□□□□ -0.06
CNEP1R1-202ENST00000427478 SND1-IT1Q9HBX3 110 aa14.69□□□□□ -0.06
CNEP1R1-202ENST00000427478 CXCL5P42830 114 aa14.69□□□□□ -0.06
CNEP1R1-202ENST00000427478 CCL18P55774 89 aa14.68□□□□□ -0.06
CNEP1R1-202ENST00000427478 TRAV8-4A0A0B4J246 113 aa14.67□□□□□ -0.06
CNEP1R1-202ENST00000427478 SMCPP49901 116 aaPredicted RBP14.67□□□□□ -0.06
CNEP1R1-202ENST00000427478 SPAG11BQ08648 103 aa14.67□□□□□ -0.06
CNEP1R1-202ENST00000427478 KLK5Q9Y337 293 aaPredicted RBP14.66□□□□□ -0.06
CNEP1R1-202ENST00000427478 K7ERU9 68 aa14.66□□□□□ -0.06
CNEP1R1-202ENST00000427478 ETDBQ3ZM63 59 aa14.66□□□□□ -0.06
CNEP1R1-202ENST00000427478 HUWE1Q7Z6Z7 4374 aaKnown RBP14.66□□□□□ -0.06
CNEP1R1-202ENST00000427478 COX6CP09669 75 aa14.65□□□□□ -0.06
CNEP1R1-202ENST00000427478 ATXN8Q156A1 80 aa14.65□□□□□ -0.06
CNEP1R1-202ENST00000427478 C6orf223Q8N319 242 aa14.65□□□□□ -0.06
CNEP1R1-202ENST00000427478 LINC00526Q96FQ7 95 aa14.65□□□□□ -0.06
CNEP1R1-202ENST00000427478 IGKV2-28A0A075B6P5 120 aa14.63□□□□□ -0.07
CNEP1R1-202ENST00000427478 IGKV2D-28P01615 120 aa14.63□□□□□ -0.07
CNEP1R1-202ENST00000427478 RNF151Q2KHN1 245 aa14.63□□□□□ -0.07
CNEP1R1-202ENST00000427478 C9orf116Q5BN46 136 aaPredicted RBP14.63□□□□□ -0.07
CNEP1R1-202ENST00000427478 C15orf53Q8NAA6 179 aa14.63□□□□□ -0.07
CNEP1R1-202ENST00000427478 MGAM2Q2M2H8 2515 aa14.63□□□□□ -0.07
CNEP1R1-202ENST00000427478 LINC01556Q5JQF7 62 aa14.62□□□□□ -0.07
CNEP1R1-202ENST00000427478 LINC00337Q8N6G1 96 aa14.62□□□□□ -0.07
CNEP1R1-202ENST00000427478 CLEC2BQ92478 149 aa14.62□□□□□ -0.07
CNEP1R1-202ENST00000427478 TRAV13-2A0A0B4J235 113 aa14.61□□□□□ -0.07
CNEP1R1-202ENST00000427478 C9JAW5 83 aa14.61□□□□□ -0.07
CNEP1R1-202ENST00000427478 C10orf25Q5T742 122 aa14.6□□□□□ -0.07
CNEP1R1-202ENST00000427478 COX17Q14061 63 aa14.6□□□□□ -0.07
CNEP1R1-202ENST00000427478 UNQ6190/PRO20217Q6UXQ8 127 aa14.6□□□□□ -0.07
CNEP1R1-202ENST00000427478 LINC01620Q4KN68 170 aa14.59□□□□□ -0.07
CNEP1R1-202ENST00000427478 KRTAP26-1Q6PEX3 210 aa14.59□□□□□ -0.07
CNEP1R1-202ENST00000427478 SLC25A20O43772 301 aa14.57□□□□□ -0.08
CNEP1R1-202ENST00000427478 LINC00588Q9Y4M8 146 aa14.57□□□□□ -0.08
CNEP1R1-202ENST00000427478 LST1O00453 97 aa14.56□□□□□ -0.08
CNEP1R1-202ENST00000427478 DNAH10OSP0CZ25 163 aa14.56□□□□□ -0.08
CNEP1R1-202ENST00000427478 C1orf43Q9BWL3 253 aa14.55□□□□□ -0.08
CNEP1R1-202ENST00000427478 NTN5Q8WTR8 489 aaPredicted RBP14.54□□□□□ -0.08
CNEP1R1-202ENST00000427478 HIGD2BQ4VC39 106 aa14.54□□□□□ -0.08
CNEP1R1-202ENST00000427478 IGKV2D-24A0A075B6R9 120 aa14.53□□□□□ -0.08
CNEP1R1-202ENST00000427478 Q9HAA7 133 aa14.52□□□□□ -0.09
CNEP1R1-202ENST00000427478 RPL28P46779 137 aaKnown RBP14.51□□□□□ -0.09
CNEP1R1-202ENST00000427478 ANKRD29Q8N6D5 301 aa14.51□□□□□ -0.09
CNEP1R1-202ENST00000427478 OR13C6PQ8NH95 151 aa14.51□□□□□ -0.09
CNEP1R1-202ENST00000427478 VPS25Q9BRG1 176 aa14.51□□□□□ -0.09
CNEP1R1-202ENST00000427478 TEN1Q86WV5 123 aa14.51□□□□□ -0.09
CNEP1R1-202ENST00000427478 TRBV10-2A0A0K0K1G8 114 aa14.5□□□□□ -0.09
CNEP1R1-202ENST00000427478 ZNF561-AS1K7EIQ3 104 aa14.5□□□□□ -0.09
CNEP1R1-202ENST00000427478 C15orf56Q8N910 161 aa14.5□□□□□ -0.09
CNEP1R1-202ENST00000427478 SMIM11BQ8TCY0 68 aa14.5□□□□□ -0.09
CNEP1R1-202ENST00000427478 C6orf48Q9UBA6 75 aa14.5□□□□□ -0.09
CNEP1R1-202ENST00000427478 B9D2Q9BPU9 175 aa14.5□□□□□ -0.09
CNEP1R1-202ENST00000427478 PRR3P79522 188 aaKnown RBP14.49□□□□□ -0.09
CNEP1R1-202ENST00000427478 GVQW2A0A096LPI5 108 aaPredicted RBP14.48□□□□□ -0.09
CNEP1R1-202ENST00000427478 M0QXV9 152 aa14.48□□□□□ -0.09
CNEP1R1-202ENST00000427478 CAMK2N2Q96S95 79 aa14.47□□□□□ -0.09
CNEP1R1-202ENST00000427478 J3QR89 54 aa14.47□□□□□ -0.09
CNEP1R1-202ENST00000427478 NDUFC2O95298 119 aa14.47□□□□□ -0.09
CNEP1R1-202ENST00000427478 COL7A1Q02388 2944 aa14.46□□□□□ -0.09
CNEP1R1-202ENST00000427478 Q8NDZ9 215 aa14.46□□□□□ -0.09
CNEP1R1-202ENST00000427478 MUC7Q8TAX7 377 aa14.45□□□□□ -0.1
CNEP1R1-202ENST00000427478 FAM218AQ96MZ4 157 aa14.45□□□□□ -0.1
CNEP1R1-202ENST00000427478 CARD19Q96LW7 228 aa14.45□□□□□ -0.1
CNEP1R1-202ENST00000427478 PPDPFLQ8WWR9 84 aa14.44□□□□□ -0.1
CNEP1R1-202ENST00000427478 DNAH9Q9NYC9 4486 aa14.44□□□□□ -0.1
CNEP1R1-202ENST00000427478 NCR3O14931 201 aa14.43□□□□□ -0.1
CNEP1R1-202ENST00000427478 Q6ZRU5 148 aa14.42□□□□□ -0.1
CNEP1R1-202ENST00000427478 H3BT86 120 aa14.42□□□□□ -0.1
CNEP1R1-202ENST00000427478 LINC01600Q96MT4 127 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms