RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 C2orf82Q6UX34 121 aa15.96■□□□□ 0.15
HERPUD2-205ENST00000427455 PLAC8Q9NZF1 115 aa15.96■□□□□ 0.15
HERPUD2-205ENST00000427455 C6orf48Q9UBA6 75 aa15.96■□□□□ 0.15
HERPUD2-205ENST00000427455 TRBV30A0A0K0K1B3 111 aa15.95■□□□□ 0.14
HERPUD2-205ENST00000427455 ATP6V1G1O75348 118 aa15.95■□□□□ 0.14
HERPUD2-205ENST00000427455 C6orf226Q5I0X4 101 aa15.95■□□□□ 0.14
HERPUD2-205ENST00000427455 TRAV12-1A0A0B4J245 112 aa15.94■□□□□ 0.14
HERPUD2-205ENST00000427455 HIST1H2BKO60814 126 aa15.94■□□□□ 0.14
HERPUD2-205ENST00000427455 HIST1H2BJP06899 126 aa15.94■□□□□ 0.14
HERPUD2-205ENST00000427455 SPINK8P0C7L1 97 aa15.94■□□□□ 0.14
HERPUD2-205ENST00000427455 HIST1H2BOP23527 126 aa15.94■□□□□ 0.14
HERPUD2-205ENST00000427455 HIST1H2BBP33778 126 aa15.94■□□□□ 0.14
HERPUD2-205ENST00000427455 HIST1H2BDP58876 126 aa15.94■□□□□ 0.14
HERPUD2-205ENST00000427455 CKS1BP61024 79 aa15.94■□□□□ 0.14
HERPUD2-205ENST00000427455 HIST1H2BCP62807 126 aa15.94■□□□□ 0.14
HERPUD2-205ENST00000427455 RPL18AQ02543 176 aaKnown RBP15.94■□□□□ 0.14
HERPUD2-205ENST00000427455 GAGE2BQ13066 116 aa15.94■□□□□ 0.14
HERPUD2-205ENST00000427455 HIST2H2BEQ16778 126 aa15.94■□□□□ 0.14
HERPUD2-205ENST00000427455 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.94■□□□□ 0.14
HERPUD2-205ENST00000427455 HIST1H2BHQ93079 126 aa15.94■□□□□ 0.14
HERPUD2-205ENST00000427455 HIST1H2BNQ99877 126 aa15.94■□□□□ 0.14
HERPUD2-205ENST00000427455 HIST1H2BMQ99879 126 aa15.94■□□□□ 0.14
HERPUD2-205ENST00000427455 STPG4Q8N801 248 aa15.93■□□□□ 0.14
HERPUD2-205ENST00000427455 CHTOPQ9Y3Y2 248 aaKnown RBP15.93■□□□□ 0.14
HERPUD2-205ENST00000427455 NUPR1O60356 82 aa15.92■□□□□ 0.14
HERPUD2-205ENST00000427455 LEPROTL1O95214 131 aa15.92■□□□□ 0.14
HERPUD2-205ENST00000427455 PLA2G1BP04054 148 aaKnown RBP15.92■□□□□ 0.14
HERPUD2-205ENST00000427455 ZNF22P17026 224 aaPredicted RBP15.92■□□□□ 0.14
HERPUD2-205ENST00000427455 CXCL5P42830 114 aa15.92■□□□□ 0.14
HERPUD2-205ENST00000427455 SRRM2Q9UQ35 2752 aaKnown RBP15.91■□□□□ 0.14
HERPUD2-205ENST00000427455 C11orf86A6NJI1 115 aa15.91■□□□□ 0.14
HERPUD2-205ENST00000427455 TLX1NBP0CAT3 122 aa15.91■□□□□ 0.14
HERPUD2-205ENST00000427455 COX7B2Q8TF08 81 aa15.91■□□□□ 0.14
HERPUD2-205ENST00000427455 HSPB8Q9UJY1 196 aa15.89■□□□□ 0.13
HERPUD2-205ENST00000427455 F8VRH5 84 aa15.88■□□□□ 0.13
HERPUD2-205ENST00000427455 IGLV5-39A0A0G2JS06 123 aa15.87■□□□□ 0.13
HERPUD2-205ENST00000427455 TMEM170BQ5T4T1 132 aa15.86■□□□□ 0.13
HERPUD2-205ENST00000427455 Q6ZRP5 223 aa15.86■□□□□ 0.13
HERPUD2-205ENST00000427455 NDUFC2-KCTD14E9PQ53 114 aa15.85■□□□□ 0.13
HERPUD2-205ENST00000427455 FABP4P15090 132 aa15.84■□□□□ 0.13
HERPUD2-205ENST00000427455 C9orf116Q5BN46 136 aaPredicted RBP15.84■□□□□ 0.13
HERPUD2-205ENST00000427455 H0Y8G0 127 aa15.83■□□□□ 0.12
HERPUD2-205ENST00000427455 RPL37AP61513 92 aaKnown RBP15.83■□□□□ 0.12
HERPUD2-205ENST00000427455 ODF1Q14990 250 aa15.83■□□□□ 0.12
HERPUD2-205ENST00000427455 C7orf33Q8WU49 177 aa15.82■□□□□ 0.12
HERPUD2-205ENST00000427455 INAFM2P0DMQ5 153 aa15.81■□□□□ 0.12
HERPUD2-205ENST00000427455 GAGE2EQ4V326 116 aa15.81■□□□□ 0.12
HERPUD2-205ENST00000427455 GAGE2DQ9UEU5 116 aa15.81■□□□□ 0.12
HERPUD2-205ENST00000427455 KRTAP10-4P60372 401 aaPredicted RBP15.8■□□□□ 0.12
HERPUD2-205ENST00000427455 A0A1W2PNN7 141 aa15.79■□□□□ 0.12
HERPUD2-205ENST00000427455 TMEM223A0PJW6 202 aa15.77■□□□□ 0.12
HERPUD2-205ENST00000427455 COA6Q5JTJ3 125 aaKnown RBP15.77■□□□□ 0.12
HERPUD2-205ENST00000427455 MAP1LC3CQ9BXW4 147 aa15.77■□□□□ 0.12
HERPUD2-205ENST00000427455 PLNP26678 52 aa15.75■□□□□ 0.11
HERPUD2-205ENST00000427455 SFTA2Q6UW10 78 aa15.74■□□□□ 0.11
HERPUD2-205ENST00000427455 C9orf129Q5T035 196 aaKnown RBP15.73■□□□□ 0.11
HERPUD2-205ENST00000427455 FAM168BA1KXE4 195 aa15.72■□□□□ 0.11
HERPUD2-205ENST00000427455 DPM2O94777 84 aa15.71■□□□□ 0.11
HERPUD2-205ENST00000427455 FAM19A5Q7Z5A7 132 aaPredicted RBP15.7■□□□□ 0.1
HERPUD2-205ENST00000427455 PMCHL2Q9BQD1 86 aa15.69■□□□□ 0.1
HERPUD2-205ENST00000427455 XAGE1AQ9HD64 81 aa15.69■□□□□ 0.1
HERPUD2-205ENST00000427455 MYCBP2O75592 4640 aa15.69■□□□□ 0.1
HERPUD2-205ENST00000427455 FLG2Q5D862 2391 aaPredicted RBP15.68■□□□□ 0.1
HERPUD2-205ENST00000427455 ZNF625Q96I27 306 aaPredicted RBP15.68■□□□□ 0.1
HERPUD2-205ENST00000427455 PKHD1L1Q86WI1 4243 aa15.67■□□□□ 0.1
HERPUD2-205ENST00000427455 SYS1-DBNDD2H3BUS1 97 aa15.67■□□□□ 0.1
HERPUD2-205ENST00000427455 IGKCP01834 107 aa15.67■□□□□ 0.1
HERPUD2-205ENST00000427455 PRR3P79522 188 aaKnown RBP15.67■□□□□ 0.1
HERPUD2-205ENST00000427455 PHF5AQ7RTV0 110 aaKnown RBP15.67■□□□□ 0.1
HERPUD2-205ENST00000427455 ERG28Q9UKR5 140 aa15.66■□□□□ 0.1
HERPUD2-205ENST00000427455 KRTAP7-1Q8IUC3 87 aa15.65■□□□□ 0.1
HERPUD2-205ENST00000427455 M0QXV9 152 aa15.64■□□□□ 0.09
HERPUD2-205ENST00000427455 PFN2P35080 140 aa15.64■□□□□ 0.09
HERPUD2-205ENST00000427455 COX17Q14061 63 aa15.64■□□□□ 0.09
HERPUD2-205ENST00000427455 HERVK_113P61574 105 aa15.63■□□□□ 0.09
HERPUD2-205ENST00000427455 HNRNPA3P51991 378 aaKnown RBP15.62■□□□□ 0.09
HERPUD2-205ENST00000427455 PET117Q6UWS5 81 aa15.62■□□□□ 0.09
HERPUD2-205ENST00000427455 SERTAD4-AS1Q5TG53 156 aa15.61■□□□□ 0.09
HERPUD2-205ENST00000427455 LEPROTO15243 131 aa15.6■□□□□ 0.09
HERPUD2-205ENST00000427455 LINC01545Q5VT33 79 aa15.6■□□□□ 0.09
HERPUD2-205ENST00000427455 PLEKHB2Q96CS7 222 aa15.6■□□□□ 0.09
HERPUD2-205ENST00000427455 C3orf79P0CE67 100 aa15.59■□□□□ 0.09
HERPUD2-205ENST00000427455 NDUFA12Q9UI09 145 aa15.59■□□□□ 0.09
HERPUD2-205ENST00000427455 HERV-K104P63124 156 aa15.58■□□□□ 0.08
HERPUD2-205ENST00000427455 TSPEAR-AS2P59090 65 aa15.57■□□□□ 0.08
HERPUD2-205ENST00000427455 KRTDAPP60985 99 aa15.57■□□□□ 0.08
HERPUD2-205ENST00000427455 PSORS1C2Q9UIG4 136 aa15.57■□□□□ 0.08
HERPUD2-205ENST00000427455 PLA2G2DQ9UNK4 145 aa15.57■□□□□ 0.08
HERPUD2-205ENST00000427455 C22orf24Q9Y442 160 aa15.56■□□□□ 0.08
HERPUD2-205ENST00000427455 MYMXA0A1B0GTQ4 84 aa15.55■□□□□ 0.08
HERPUD2-205ENST00000427455 J3QQQ9 107 aa15.55■□□□□ 0.08
HERPUD2-205ENST00000427455 UBE2BP63146 152 aa15.55■□□□□ 0.08
HERPUD2-205ENST00000427455 SND1-IT1Q9HBX3 110 aa15.55■□□□□ 0.08
HERPUD2-205ENST00000427455 TP73-AS1Q9UF72 201 aa15.55■□□□□ 0.08
HERPUD2-205ENST00000427455 LINC00158P58513 81 aa15.53■□□□□ 0.08
HERPUD2-205ENST00000427455 LBHQ53QV2 105 aaPredicted RBP15.53■□□□□ 0.08
HERPUD2-205ENST00000427455 MEIG1Q5JSS6 88 aa15.53■□□□□ 0.08
HERPUD2-205ENST00000427455 LGALS3P17931 250 aaKnown RBP15.52■□□□□ 0.08
HERPUD2-205ENST00000427455 NMUP48645 174 aa15.52■□□□□ 0.08
HERPUD2-205ENST00000427455 KRTAP11-1Q8IUC1 163 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms