RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 Q8N2B8 174 aa10.45□□□□□ -0.74
PTPN13-203ENST00000427191 AMELXQ99217 191 aa10.45□□□□□ -0.74
PTPN13-203ENST00000427191 BRI3O95415 125 aa10.45□□□□□ -0.74
PTPN13-203ENST00000427191 LY6G6DO95868 133 aa10.45□□□□□ -0.74
PTPN13-203ENST00000427191 Q6ZPA2 131 aa10.45□□□□□ -0.74
PTPN13-203ENST00000427191 LINC00482Q8N8I6 264 aa10.44□□□□□ -0.74
PTPN13-203ENST00000427191 COX8CQ7Z4L0 72 aa10.44□□□□□ -0.74
PTPN13-203ENST00000427191 FSHBP01225 129 aa10.44□□□□□ -0.74
PTPN13-203ENST00000427191 PRR9Q5T870 116 aa10.43□□□□□ -0.74
PTPN13-203ENST00000427191 A0A087WYN8 130 aa10.43□□□□□ -0.74
PTPN13-203ENST00000427191 H3BPC8 53 aa10.42□□□□□ -0.74
PTPN13-203ENST00000427191 PLA2G2AP14555 144 aa10.41□□□□□ -0.74
PTPN13-203ENST00000427191 C1orf229Q6ZS94 237 aaPredicted RBP10.41□□□□□ -0.74
PTPN13-203ENST00000427191 ZFYVE26Q68DK2 2539 aa10.41□□□□□ -0.74
PTPN13-203ENST00000427191 UNQ6190/PRO20217Q6UXQ8 127 aa10.41□□□□□ -0.74
PTPN13-203ENST00000427191 IGLV5-52A0A0A0MRZ9 124 aa10.41□□□□□ -0.74
PTPN13-203ENST00000427191 LINC01006Q8NI28 216 aa10.4□□□□□ -0.74
PTPN13-203ENST00000427191 SERTAD4-AS1Q5TG53 156 aa10.4□□□□□ -0.74
PTPN13-203ENST00000427191 C11orf21Q9P2W6 132 aa10.4□□□□□ -0.74
PTPN13-203ENST00000427191 X6R8D5 127 aa10.4□□□□□ -0.74
PTPN13-203ENST00000427191 ACYP2P14621 99 aa10.4□□□□□ -0.74
PTPN13-203ENST00000427191 IGLV2-18A0A075B6J9 118 aa10.4□□□□□ -0.75
PTPN13-203ENST00000427191 RPS28P62857 69 aaKnown RBP10.4□□□□□ -0.75
PTPN13-203ENST00000427191 CRIP3Q6Q6R5 217 aa10.4□□□□□ -0.75
PTPN13-203ENST00000427191 CRYGAP11844 174 aa10.39□□□□□ -0.75
PTPN13-203ENST00000427191 C19orf84I3L1E1 186 aa10.39□□□□□ -0.75
PTPN13-203ENST00000427191 SPAG11AQ6PDA7 123 aa10.39□□□□□ -0.75
PTPN13-203ENST00000427191 LY6G6CO95867 125 aa10.39□□□□□ -0.75
PTPN13-203ENST00000427191 CRIP2P52943 208 aaPredicted RBP10.38□□□□□ -0.75
PTPN13-203ENST00000427191 A0A1B0GU69 56 aa10.38□□□□□ -0.75
PTPN13-203ENST00000427191 A0A1W2PNU3 283 aaPredicted RBP10.38□□□□□ -0.75
PTPN13-203ENST00000427191 C1orf64Q8NEQ6 169 aa10.38□□□□□ -0.75
PTPN13-203ENST00000427191 MUC22E2RYF6 1773 aaPredicted RBP10.37□□□□□ -0.75
PTPN13-203ENST00000427191 C6orf223Q8N319 242 aa10.36□□□□□ -0.75
PTPN13-203ENST00000427191 NANOS2P60321 138 aaKnown RBP10.36□□□□□ -0.75
PTPN13-203ENST00000427191 BEAN1Q3B7T3 259 aa10.36□□□□□ -0.75
PTPN13-203ENST00000427191 A0A087WSZ3 146 aa10.36□□□□□ -0.75
PTPN13-203ENST00000427191 A0A087WVE0 104 aa10.36□□□□□ -0.75
PTPN13-203ENST00000427191 Q6ZTC4 211 aa10.35□□□□□ -0.75
PTPN13-203ENST00000427191 PCOTHQ58A44 107 aa10.34□□□□□ -0.75
PTPN13-203ENST00000427191 M0R2N4 97 aa10.34□□□□□ -0.75
PTPN13-203ENST00000427191 C7orf65Q6ZTY9 151 aa10.33□□□□□ -0.76
PTPN13-203ENST00000427191 IGLV1-51P01701 117 aa10.33□□□□□ -0.76
PTPN13-203ENST00000427191 COX6A2Q02221 97 aa10.32□□□□□ -0.76
PTPN13-203ENST00000427191 ADAMTSL4-AS1Q5T5F5 129 aa10.31□□□□□ -0.76
PTPN13-203ENST00000427191 C8orf87E5RJ46 101 aa10.31□□□□□ -0.76
PTPN13-203ENST00000427191 LINC01556Q5JQF7 62 aa10.31□□□□□ -0.76
PTPN13-203ENST00000427191 FHL2Q14192 279 aa10.31□□□□□ -0.76
PTPN13-203ENST00000427191 F8P00451 2351 aa10.31□□□□□ -0.76
PTPN13-203ENST00000427191 SPINK1P00995 79 aa10.3□□□□□ -0.76
PTPN13-203ENST00000427191 SBSPONQ8IVN8 264 aa10.3□□□□□ -0.76
PTPN13-203ENST00000427191 C9orf116Q5BN46 136 aaPredicted RBP10.3□□□□□ -0.76
PTPN13-203ENST00000427191 FN1P02751 2386 aaKnown RBP10.29□□□□□ -0.76
PTPN13-203ENST00000427191 C10orf99Q6UWK7 81 aa10.29□□□□□ -0.76
PTPN13-203ENST00000427191 TSPEAR-AS2P59090 65 aa10.29□□□□□ -0.76
PTPN13-203ENST00000427191 LINC01546A6NGU7 62 aa10.28□□□□□ -0.76
PTPN13-203ENST00000427191 ODF3L2Q3SX64 289 aa10.28□□□□□ -0.76
PTPN13-203ENST00000427191 LINC00846Q9NV44 126 aa10.28□□□□□ -0.76
PTPN13-203ENST00000427191 PIEZO1Q92508 2521 aa10.28□□□□□ -0.76
PTPN13-203ENST00000427191 GAS8-AS1O95177 125 aa10.27□□□□□ -0.76
PTPN13-203ENST00000427191 C16orf95Q9H693 158 aa10.27□□□□□ -0.77
PTPN13-203ENST00000427191 C6orf48Q9UBA6 75 aa10.26□□□□□ -0.77
PTPN13-203ENST00000427191 LINC00310P59036 64 aa10.26□□□□□ -0.77
PTPN13-203ENST00000427191 PIEZO2Q9H5I5 2752 aa10.26□□□□□ -0.77
PTPN13-203ENST00000427191 TLN2Q9Y4G6 2542 aa10.25□□□□□ -0.77
PTPN13-203ENST00000427191 IGLV4-60A0A075B6I1 120 aa10.25□□□□□ -0.77
PTPN13-203ENST00000427191 NHLRC4P0CG21 123 aaPredicted RBP10.25□□□□□ -0.77
PTPN13-203ENST00000427191 LINC00337Q8N6G1 96 aa10.24□□□□□ -0.77
PTPN13-203ENST00000427191 ABCA12Q86UK0 2595 aa10.24□□□□□ -0.77
PTPN13-203ENST00000427191 PRR3P79522 188 aaKnown RBP10.24□□□□□ -0.77
PTPN13-203ENST00000427191 C1orf134Q5TEV5 83 aa10.24□□□□□ -0.77
PTPN13-203ENST00000427191 URB1-AS1Q96HZ7 61 aa10.24□□□□□ -0.77
PTPN13-203ENST00000427191 COL27A1Q8IZC6 1860 aaPredicted RBP10.23□□□□□ -0.77
PTPN13-203ENST00000427191 IGKV2D-30A0A075B6S6 120 aa10.22□□□□□ -0.77
PTPN13-203ENST00000427191 IGKV2-30P06310 120 aa10.22□□□□□ -0.77
PTPN13-203ENST00000427191 LOC110117498A0A087WWA1 95 aa10.22□□□□□ -0.77
PTPN13-203ENST00000427191 C18orf65Q6ZTR6 163 aa10.22□□□□□ -0.77
PTPN13-203ENST00000427191 IGLV5-39A0A0G2JS06 123 aa10.22□□□□□ -0.77
PTPN13-203ENST00000427191 C11orf72Q8NBR9 251 aa10.22□□□□□ -0.77
PTPN13-203ENST00000427191 LYPD5Q6UWN5 251 aa10.21□□□□□ -0.78
PTPN13-203ENST00000427191 TLN1Q9Y490 2541 aaKnown RBP10.21□□□□□ -0.78
PTPN13-203ENST00000427191 SMIM29Q86T20 159 aa10.2□□□□□ -0.78
PTPN13-203ENST00000427191 WISP2O76076 250 aa10.2□□□□□ -0.78
PTPN13-203ENST00000427191 PRLHP81277 87 aa10.2□□□□□ -0.78
PTPN13-203ENST00000427191 TRAV22A0A0B4J277 110 aa10.2□□□□□ -0.78
PTPN13-203ENST00000427191 CDIP1Q9H305 208 aa10.19□□□□□ -0.78
PTPN13-203ENST00000427191 PRO3102Q9H379 93 aa10.19□□□□□ -0.78
PTPN13-203ENST00000427191 RETNLBQ9BQ08 111 aa10.18□□□□□ -0.78
PTPN13-203ENST00000427191 ERC2-IT1O76042 136 aa10.17□□□□□ -0.78
PTPN13-203ENST00000427191 ATP11AUNQ6ZP68 121 aa10.17□□□□□ -0.78
PTPN13-203ENST00000427191 SPATA3Q8NHX4 192 aa10.17□□□□□ -0.78
PTPN13-203ENST00000427191 CYP4F30PQ9H0H9 118 aa10.16□□□□□ -0.78
PTPN13-203ENST00000427191 PRM2P04554 102 aa10.16□□□□□ -0.78
PTPN13-203ENST00000427191 MOBPQ13875 183 aa10.15□□□□□ -0.78
PTPN13-203ENST00000427191 SMCR5Q8TEV8 140 aa10.15□□□□□ -0.78
PTPN13-203ENST00000427191 ZNF462Q96JM2 2506 aa10.15□□□□□ -0.78
PTPN13-203ENST00000427191 C22orf24Q9Y442 160 aa10.15□□□□□ -0.78
PTPN13-203ENST00000427191 A0A096LNJ9 63 aa10.15□□□□□ -0.79
PTPN13-203ENST00000427191 LOC101927531A0A1B0GV80 90 aa10.14□□□□□ -0.79
PTPN13-203ENST00000427191 H3BNG1 76 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms