RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 FA2HQ7L5A8 372 aa7.89□□□□□ -1.15
SGCE-203ENST00000425444 GEMIN7Q9H840 131 aaKnown RBP7.89□□□□□ -1.15
SGCE-203ENST00000425444 SMCO4Q9NRQ5 59 aa7.89□□□□□ -1.15
SGCE-203ENST00000425444 GAGE2DQ9UEU5 116 aa7.89□□□□□ -1.15
SGCE-203ENST00000425444 TLX1NBP0CAT3 122 aa7.88□□□□□ -1.15
SGCE-203ENST00000425444 CKS1BP61024 79 aa7.88□□□□□ -1.15
SGCE-203ENST00000425444 ERASQ7Z444 233 aa7.88□□□□□ -1.15
SGCE-203ENST00000425444 LINC01549A6NIU2 74 aa7.87□□□□□ -1.15
SGCE-203ENST00000425444 APOC3P02656 99 aa7.87□□□□□ -1.15
SGCE-203ENST00000425444 NDUFA5Q16718 116 aa7.87□□□□□ -1.15
SGCE-203ENST00000425444 PHF5AQ7RTV0 110 aaKnown RBP7.87□□□□□ -1.15
SGCE-203ENST00000425444 FAM19A5Q7Z5A7 132 aaPredicted RBP7.87□□□□□ -1.15
SGCE-203ENST00000425444 FAM19A3Q7Z5A8 133 aa7.87□□□□□ -1.15
SGCE-203ENST00000425444 CDKN2A-AS1Q9UH64 79 aa7.87□□□□□ -1.15
SGCE-203ENST00000425444 NDUFC2-KCTD14E9PQ53 114 aa7.86□□□□□ -1.15
SGCE-203ENST00000425444 C6orf226Q5I0X4 101 aa7.86□□□□□ -1.15
SGCE-203ENST00000425444 SPINK6Q6UWN8 80 aa7.86□□□□□ -1.15
SGCE-203ENST00000425444 Q8IZM0 81 aa7.86□□□□□ -1.15
SGCE-203ENST00000425444 LINC00469Q8N7U9 141 aa7.86□□□□□ -1.15
SGCE-203ENST00000425444 LINC01600Q96MT4 127 aa7.86□□□□□ -1.15
SGCE-203ENST00000425444 FAM168BA1KXE4 195 aa7.85□□□□□ -1.15
SGCE-203ENST00000425444 REG3GQ6UW15 175 aa7.85□□□□□ -1.15
SGCE-203ENST00000425444 PSORS1C2Q9UIG4 136 aa7.85□□□□□ -1.15
SGCE-203ENST00000425444 TRAPPC1Q9Y5R8 145 aa7.85□□□□□ -1.15
SGCE-203ENST00000425444 LINC01546A6NGU7 62 aa7.84□□□□□ -1.15
SGCE-203ENST00000425444 SNAPINO95295 136 aa7.84□□□□□ -1.15
SGCE-203ENST00000425444 C1orf137Q5JT78 98 aa7.84□□□□□ -1.15
SGCE-203ENST00000425444 SVBPQ8N300 66 aa7.84□□□□□ -1.15
SGCE-203ENST00000425444 A0A0U1RQV1 116 aa7.83□□□□□ -1.16
SGCE-203ENST00000425444 TINCRA0A1B0GVN0 87 aa7.83□□□□□ -1.16
SGCE-203ENST00000425444 M0QXV9 152 aa7.83□□□□□ -1.16
SGCE-203ENST00000425444 F8VRH5 84 aa7.82□□□□□ -1.16
SGCE-203ENST00000425444 UBE2BP63146 152 aa7.82□□□□□ -1.16
SGCE-203ENST00000425444 PMVKQ15126 192 aa7.82□□□□□ -1.16
SGCE-203ENST00000425444 SMIM1B2RUZ4 78 aa7.81□□□□□ -1.16
SGCE-203ENST00000425444 CXCL5P42830 114 aa7.81□□□□□ -1.16
SGCE-203ENST00000425444 SRSF9Q13242 221 aaKnown RBP eCLIP7.81□□□□□ -1.16
SGCE-203ENST00000425444 CST9LQ9H4G1 147 aa7.81□□□□□ -1.16
SGCE-203ENST00000425444 SPINK8P0C7L1 97 aa7.8□□□□□ -1.16
SGCE-203ENST00000425444 NDUFA6P56556 154 aa7.8□□□□□ -1.16
SGCE-203ENST00000425444 PDZD11Q5EBL8 140 aa7.8□□□□□ -1.16
SGCE-203ENST00000425444 C9orf129Q5T035 196 aaKnown RBP7.8□□□□□ -1.16
SGCE-203ENST00000425444 C18orf32Q8TCD1 76 aa7.8□□□□□ -1.16
SGCE-203ENST00000425444 COX7B2Q8TF08 81 aa7.8□□□□□ -1.16
SGCE-203ENST00000425444 IGLV5-45A0A087WSX0 123 aa7.79□□□□□ -1.16
SGCE-203ENST00000425444 H3BRM9 83 aa7.79□□□□□ -1.16
SGCE-203ENST00000425444 HBDP02042 147 aa7.79□□□□□ -1.16
SGCE-203ENST00000425444 LINC00614P0C842 121 aa7.79□□□□□ -1.16
SGCE-203ENST00000425444 KRTAP10-8P60410 259 aa7.79□□□□□ -1.16
SGCE-203ENST00000425444 RAB5BP61020 215 aa7.78□□□□□ -1.16
SGCE-203ENST00000425444 PMCHL1Q16048 86 aa7.78□□□□□ -1.16
SGCE-203ENST00000425444 URB1-AS1Q96HZ7 61 aa7.78□□□□□ -1.16
SGCE-203ENST00000425444 XAGE1AQ9HD64 81 aa7.78□□□□□ -1.16
SGCE-203ENST00000425444 A0A096LNJ9 63 aa7.77□□□□□ -1.17
SGCE-203ENST00000425444 IGLV7-43P04211 117 aa7.77□□□□□ -1.17
SGCE-203ENST00000425444 KRTAP11-1Q8IUC1 163 aa7.77□□□□□ -1.17
SGCE-203ENST00000425444 KRTAP7-1Q8IUC3 87 aa7.77□□□□□ -1.17
SGCE-203ENST00000425444 DIRC1Q969H9 104 aa7.76□□□□□ -1.17
SGCE-203ENST00000425444 ATP5LO75964 103 aa7.75□□□□□ -1.17
SGCE-203ENST00000425444 IGLC3P0DOY3 106 aa7.75□□□□□ -1.17
SGCE-203ENST00000425444 LBHQ53QV2 105 aaPredicted RBP7.74□□□□□ -1.17
SGCE-203ENST00000425444 C22orf24Q9Y442 160 aa7.74□□□□□ -1.17
SGCE-203ENST00000425444 FSIP2Q5CZC0 6907 aa7.73□□□□□ -1.17
SGCE-203ENST00000425444 ZNF22P17026 224 aaPredicted RBP7.73□□□□□ -1.17
SGCE-203ENST00000425444 LCE2AQ5TA79 106 aaPredicted RBP7.73□□□□□ -1.17
SGCE-203ENST00000425444 BAGE3Q86Y29 109 aa7.73□□□□□ -1.17
SGCE-203ENST00000425444 H0Y9J4 135 aa7.72□□□□□ -1.17
SGCE-203ENST00000425444 CBLN2Q8IUK8 224 aa7.72□□□□□ -1.17
SGCE-203ENST00000425444 TMEM170BQ5T4T1 132 aa7.71□□□□□ -1.18
SGCE-203ENST00000425444 MRPL55Q7Z7F7 128 aaKnown RBP7.71□□□□□ -1.18
SGCE-203ENST00000425444 CHCHD1Q96BP2 118 aaKnown RBP7.71□□□□□ -1.18
SGCE-203ENST00000425444 YPEL4Q96NS1 127 aa7.71□□□□□ -1.18
SGCE-203ENST00000425444 IGLV5-39A0A0G2JS06 123 aa7.7□□□□□ -1.18
SGCE-203ENST00000425444 NUPR1O60356 82 aa7.7□□□□□ -1.18
SGCE-203ENST00000425444 TP73-AS1Q9UF72 201 aa7.7□□□□□ -1.18
SGCE-203ENST00000425444 CHTOPQ9Y3Y2 248 aaKnown RBP7.7□□□□□ -1.18
SGCE-203ENST00000425444 C11orf86A6NJI1 115 aa7.69□□□□□ -1.18
SGCE-203ENST00000425444 PFN2P35080 140 aa7.69□□□□□ -1.18
SGCE-203ENST00000425444 NKAPP1Q8N9T2 125 aa7.69□□□□□ -1.18
SGCE-203ENST00000425444 GAGE10A6NGK3 116 aa7.68□□□□□ -1.18
SGCE-203ENST00000425444 HSBP1O75506 76 aa7.68□□□□□ -1.18
SGCE-203ENST00000425444 IFI27L1Q96BM0 104 aa7.68□□□□□ -1.18
SGCE-203ENST00000425444 SFTA2Q6UW10 78 aa7.67□□□□□ -1.18
SGCE-203ENST00000425444 PRR26Q8N8Z3 221 aa7.67□□□□□ -1.18
SGCE-203ENST00000425444 ZNF625Q96I27 306 aaPredicted RBP7.67□□□□□ -1.18
SGCE-203ENST00000425444 ERG28Q9UKR5 140 aa7.67□□□□□ -1.18
SGCE-203ENST00000425444 TRAV12-1A0A0B4J245 112 aa7.66□□□□□ -1.18
SGCE-203ENST00000425444 RPL37AP8A6NKH3 93 aa7.66□□□□□ -1.18
SGCE-203ENST00000425444 ZNF861PO60384 105 aa7.66□□□□□ -1.18
SGCE-203ENST00000425444 LINC00167Q96N53 147 aa7.66□□□□□ -1.18
SGCE-203ENST00000425444 BCE1O60756 84 aa7.65□□□□□ -1.18
SGCE-203ENST00000425444 TRGC2P03986 189 aa7.65□□□□□ -1.18
SGCE-203ENST00000425444 RPL28P46779 137 aaKnown RBP7.65□□□□□ -1.18
SGCE-203ENST00000425444 SLC7A5P1Q8MH63 180 aa7.65□□□□□ -1.18
SGCE-203ENST00000425444 FAM19A2Q8N3H0 131 aa7.65□□□□□ -1.18
SGCE-203ENST00000425444 IGLV1-50A0A075B6I6 118 aa7.64□□□□□ -1.19
SGCE-203ENST00000425444 IGLV5-37A0A075B6J1 123 aa7.64□□□□□ -1.19
SGCE-203ENST00000425444 H0Y8G0 127 aa7.64□□□□□ -1.19
SGCE-203ENST00000425444 COX17Q14061 63 aa7.64□□□□□ -1.19
SGCE-203ENST00000425444 SND1-IT1Q9HBX3 110 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms