RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 COX7B2Q8TF08 81 aa16.25■□□□□ 0.19
TSPAN3-203ENST00000424443 APOBP04114 4563 aaKnown RBP16.25■□□□□ 0.19
TSPAN3-203ENST00000424443 CHTF8P0CG12 524 aa16.24■□□□□ 0.19
TSPAN3-203ENST00000424443 COA6Q5JTJ3 125 aaKnown RBP16.24■□□□□ 0.19
TSPAN3-203ENST00000424443 CXCL5P42830 114 aa16.24■□□□□ 0.19
TSPAN3-203ENST00000424443 CIRBP-AS1Q8TBR5 109 aa16.24■□□□□ 0.19
TSPAN3-203ENST00000424443 LINC00474Q9P2X8 69 aa16.24■□□□□ 0.19
TSPAN3-203ENST00000424443 TRBV30A0A0K0K1B3 111 aa16.23■□□□□ 0.19
TSPAN3-203ENST00000424443 RPL18AQ02543 176 aaKnown RBP16.23■□□□□ 0.19
TSPAN3-203ENST00000424443 ODF1Q14990 250 aa16.23■□□□□ 0.19
TSPAN3-203ENST00000424443 A0A096LNI7 61 aa16.22■□□□□ 0.19
TSPAN3-203ENST00000424443 PANO1I0J062 215 aa16.22■□□□□ 0.19
TSPAN3-203ENST00000424443 GAGE2BQ13066 116 aa16.22■□□□□ 0.19
TSPAN3-203ENST00000424443 MAJINQ3KP22 176 aa16.22■□□□□ 0.19
TSPAN3-203ENST00000424443 C6orf48Q9UBA6 75 aa16.22■□□□□ 0.19
TSPAN3-203ENST00000424443 SMR3BP02814 79 aaPredicted RBP16.21■□□□□ 0.19
TSPAN3-203ENST00000424443 SPACA4Q8TDM5 124 aa16.21■□□□□ 0.19
TSPAN3-203ENST00000424443 CIRBPQ14011 172 aaKnown RBP16.2■□□□□ 0.18
TSPAN3-203ENST00000424443 DNAH8Q96JB1 4490 aa16.19■□□□□ 0.18
TSPAN3-203ENST00000424443 Q8N1X5 172 aa16.19■□□□□ 0.18
TSPAN3-203ENST00000424443 PTTG1IPP53801 180 aa16.18■□□□□ 0.18
TSPAN3-203ENST00000424443 IGLV5-39A0A0G2JS06 123 aa16.17■□□□□ 0.18
TSPAN3-203ENST00000424443 PLNP26678 52 aa16.17■□□□□ 0.18
TSPAN3-203ENST00000424443 HSPG2P98160 4391 aa16.16■□□□□ 0.18
TSPAN3-203ENST00000424443 A0A087WYN8 130 aa16.16■□□□□ 0.18
TSPAN3-203ENST00000424443 DPM2O94777 84 aa16.15■□□□□ 0.18
TSPAN3-203ENST00000424443 TLX1NBP0CAT3 122 aa16.15■□□□□ 0.18
TSPAN3-203ENST00000424443 STPG4Q8N801 248 aa16.15■□□□□ 0.18
TSPAN3-203ENST00000424443 RYR1P21817 5038 aa16.15■□□□□ 0.18
TSPAN3-203ENST00000424443 TMEM223A0PJW6 202 aa16.14■□□□□ 0.18
TSPAN3-203ENST00000424443 FAM229AH3BQW9 127 aa16.14■□□□□ 0.18
TSPAN3-203ENST00000424443 C9orf116Q5BN46 136 aaPredicted RBP16.14■□□□□ 0.18
TSPAN3-203ENST00000424443 SYS1-DBNDD2H3BUS1 97 aa16.14■□□□□ 0.17
TSPAN3-203ENST00000424443 S100A6P06703 90 aa16.14■□□□□ 0.17
TSPAN3-203ENST00000424443 PMCHL2Q9BQD1 86 aa16.14■□□□□ 0.17
TSPAN3-203ENST00000424443 NDUFC2-KCTD14E9PQ53 114 aa16.12■□□□□ 0.17
TSPAN3-203ENST00000424443 IGKCP01834 107 aa16.12■□□□□ 0.17
TSPAN3-203ENST00000424443 GAGE2EQ4V326 116 aa16.12■□□□□ 0.17
TSPAN3-203ENST00000424443 Q6ZRP5 223 aa16.12■□□□□ 0.17
TSPAN3-203ENST00000424443 GAGE2DQ9UEU5 116 aa16.12■□□□□ 0.17
TSPAN3-203ENST00000424443 EPM2AB3EWF7 344 aa16.11■□□□□ 0.17
TSPAN3-203ENST00000424443 PLAC8Q9NZF1 115 aa16.11■□□□□ 0.17
TSPAN3-203ENST00000424443 LINC00528Q8N1L1 170 aa16.1■□□□□ 0.17
TSPAN3-203ENST00000424443 PET117Q6UWS5 81 aa16.09■□□□□ 0.17
TSPAN3-203ENST00000424443 Q5VSD8 79 aa16.09■□□□□ 0.17
TSPAN3-203ENST00000424443 SFTA2Q6UW10 78 aa16.09■□□□□ 0.17
TSPAN3-203ENST00000424443 S100A2P29034 98 aa16.08■□□□□ 0.16
TSPAN3-203ENST00000424443 KRTDAPP60985 99 aa16.08■□□□□ 0.16
TSPAN3-203ENST00000424443 HERVK_113P61574 105 aa16.08■□□□□ 0.16
TSPAN3-203ENST00000424443 HERC2O95714 4834 aa16.07■□□□□ 0.16
TSPAN3-203ENST00000424443 C3orf79P0CE67 100 aa16.07■□□□□ 0.16
TSPAN3-203ENST00000424443 KRTAP17-1Q9BYP8 105 aa16.05■□□□□ 0.16
TSPAN3-203ENST00000424443 LINC01545Q5VT33 79 aa16.04■□□□□ 0.16
TSPAN3-203ENST00000424443 PLA2G1BP04054 148 aaKnown RBP16.03■□□□□ 0.16
TSPAN3-203ENST00000424443 HIST3H2BBQ8N257 126 aa16.03■□□□□ 0.16
TSPAN3-203ENST00000424443 C7orf33Q8WU49 177 aa16.03■□□□□ 0.16
TSPAN3-203ENST00000424443 ZNF625Q96I27 306 aaPredicted RBP16.02■□□□□ 0.15
TSPAN3-203ENST00000424443 A0A1W2PNN7 141 aa16.01■□□□□ 0.15
TSPAN3-203ENST00000424443 C20orf202A1L168 122 aa16.01■□□□□ 0.15
TSPAN3-203ENST00000424443 LEPROTO15243 131 aa16■□□□□ 0.15
TSPAN3-203ENST00000424443 PFN2P35080 140 aa16■□□□□ 0.15
TSPAN3-203ENST00000424443 PLEKHB2Q96CS7 222 aa16■□□□□ 0.15
TSPAN3-203ENST00000424443 ERG28Q9UKR5 140 aa15.99■□□□□ 0.15
TSPAN3-203ENST00000424443 SNRPEP62304 92 aaKnown RBP15.98■□□□□ 0.15
TSPAN3-203ENST00000424443 KRTAP4-5Q9BYR2 181 aa15.98■□□□□ 0.15
TSPAN3-203ENST00000424443 XAGE1AQ9HD64 81 aa15.98■□□□□ 0.15
TSPAN3-203ENST00000424443 RPL37AP61513 92 aaKnown RBP15.97■□□□□ 0.15
TSPAN3-203ENST00000424443 COX17Q14061 63 aa15.97■□□□□ 0.15
TSPAN3-203ENST00000424443 C9orf129Q5T035 196 aaKnown RBP15.97■□□□□ 0.15
TSPAN3-203ENST00000424443 HIST1H2BLQ99880 126 aa15.97■□□□□ 0.15
TSPAN3-203ENST00000424443 NDUFA12Q9UI09 145 aa15.97■□□□□ 0.15
TSPAN3-203ENST00000424443 FAM19A5Q7Z5A7 132 aaPredicted RBP15.96■□□□□ 0.15
TSPAN3-203ENST00000424443 MYMXA0A1B0GTQ4 84 aa15.95■□□□□ 0.14
TSPAN3-203ENST00000424443 FAM168BA1KXE4 195 aa15.95■□□□□ 0.14
TSPAN3-203ENST00000424443 J3QQQ9 107 aa15.95■□□□□ 0.14
TSPAN3-203ENST00000424443 LGALS3P17931 250 aaKnown RBP15.95■□□□□ 0.14
TSPAN3-203ENST00000424443 HERV-K104P63124 156 aa15.95■□□□□ 0.14
TSPAN3-203ENST00000424443 FAT1Q14517 4588 aa15.94■□□□□ 0.14
TSPAN3-203ENST00000424443 AKR1D1P51857 326 aa15.93■□□□□ 0.14
TSPAN3-203ENST00000424443 MEIG1Q5JSS6 88 aa15.93■□□□□ 0.14
TSPAN3-203ENST00000424443 E9PLD3 99 aa15.92■□□□□ 0.14
TSPAN3-203ENST00000424443 LINC00158P58513 81 aa15.92■□□□□ 0.14
TSPAN3-203ENST00000424443 LINC00587B1AMM8 73 aa15.91■□□□□ 0.14
TSPAN3-203ENST00000424443 NMUP48645 174 aa15.91■□□□□ 0.14
TSPAN3-203ENST00000424443 TSPEAR-AS2P59090 65 aa15.91■□□□□ 0.14
TSPAN3-203ENST00000424443 C5orf52A6NGY3 159 aa15.89■□□□□ 0.13
TSPAN3-203ENST00000424443 M0QXV9 152 aa15.89■□□□□ 0.13
TSPAN3-203ENST00000424443 PHF5AQ7RTV0 110 aaKnown RBP15.89■□□□□ 0.13
TSPAN3-203ENST00000424443 A0A0U1RRA0 63 aa15.89■□□□□ 0.13
TSPAN3-203ENST00000424443 SMIM13P0DJ93 91 aa15.86■□□□□ 0.13
TSPAN3-203ENST00000424443 INAFM2P0DMQ5 153 aa15.86■□□□□ 0.13
TSPAN3-203ENST00000424443 SND1-IT1Q9HBX3 110 aa15.86■□□□□ 0.13
TSPAN3-203ENST00000424443 SERTAD4-AS1Q5TG53 156 aa15.85■□□□□ 0.13
TSPAN3-203ENST00000424443 ATOH7Q8N100 152 aa15.85■□□□□ 0.13
TSPAN3-203ENST00000424443 SRRM2Q9UQ35 2752 aaKnown RBP15.84■□□□□ 0.13
TSPAN3-203ENST00000424443 UBE2BP63146 152 aa15.84■□□□□ 0.13
TSPAN3-203ENST00000424443 KRTAP7-1Q8IUC3 87 aa15.84■□□□□ 0.13
TSPAN3-203ENST00000424443 PLA2G2DQ9UNK4 145 aa15.83■□□□□ 0.12
TSPAN3-203ENST00000424443 C22orf24Q9Y442 160 aa15.83■□□□□ 0.12
TSPAN3-203ENST00000424443 LBHQ53QV2 105 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms