RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 A0A1B0GXF2 115 aa8.97□□□□□ -0.97
RPUSD3-204ENST00000424438 CXCL5P42830 114 aa8.97□□□□□ -0.97
RPUSD3-204ENST00000424438 SRSF3P84103 164 aaKnown RBP8.97□□□□□ -0.97
RPUSD3-204ENST00000424438 RPL23P62829 140 aaKnown RBP8.96□□□□□ -0.98
RPUSD3-204ENST00000424438 ORMDL3Q8N138 153 aa8.96□□□□□ -0.98
RPUSD3-204ENST00000424438 LINC00167Q96N53 147 aa8.96□□□□□ -0.98
RPUSD3-204ENST00000424438 ALKBH7Q9BT30 221 aaPredicted RBP8.96□□□□□ -0.98
RPUSD3-204ENST00000424438 SEC11AP67812 179 aa8.95□□□□□ -0.98
RPUSD3-204ENST00000424438 ALKAL2Q6UX46 152 aa8.95□□□□□ -0.98
RPUSD3-204ENST00000424438 C2orf66Q6UXQ4 117 aa8.95□□□□□ -0.98
RPUSD3-204ENST00000424438 TOMM7Q9P0U1 55 aa8.95□□□□□ -0.98
RPUSD3-204ENST00000424438 LAMTOR2Q9Y2Q5 125 aa8.95□□□□□ -0.98
RPUSD3-204ENST00000424438 IGKV2D-26A0A0A0MRZ7 120 aa8.94□□□□□ -0.98
RPUSD3-204ENST00000424438 FP248Q71RG6 208 aaPredicted RBP8.94□□□□□ -0.98
RPUSD3-204ENST00000424438 ANAPC11Q9NYG5 84 aa8.94□□□□□ -0.98
RPUSD3-204ENST00000424438 HERVK_113P63121 156 aa8.93□□□□□ -0.98
RPUSD3-204ENST00000424438 VCX2Q9H322 139 aa8.93□□□□□ -0.98
RPUSD3-204ENST00000424438 PPDPFQ9H3Y8 114 aa8.93□□□□□ -0.98
RPUSD3-204ENST00000424438 CYSLTR1Q9Y271 337 aa8.93□□□□□ -0.98
RPUSD3-204ENST00000424438 K7EMI3 77 aa8.92□□□□□ -0.98
RPUSD3-204ENST00000424438 UBE2AP49459 152 aa8.92□□□□□ -0.98
RPUSD3-204ENST00000424438 TMEM136Q6ZRR5 245 aa8.92□□□□□ -0.98
RPUSD3-204ENST00000424438 ATP5L2Q7Z4Y8 100 aa8.92□□□□□ -0.98
RPUSD3-204ENST00000424438 PRELID3AQ96N28 172 aa8.92□□□□□ -0.98
RPUSD3-204ENST00000424438 NAT8Q9UHE5 227 aa8.92□□□□□ -0.98
RPUSD3-204ENST00000424438 ADIRFQ15847 76 aa8.91□□□□□ -0.98
RPUSD3-204ENST00000424438 ASB16-AS1Q495Z4 193 aa8.91□□□□□ -0.98
RPUSD3-204ENST00000424438 SPAG11AQ6PDA7 123 aa8.91□□□□□ -0.98
RPUSD3-204ENST00000424438 IGIPA6NJ69 53 aa8.9□□□□□ -0.98
RPUSD3-204ENST00000424438 RPL37AP8A6NKH3 93 aa8.9□□□□□ -0.98
RPUSD3-204ENST00000424438 PNRC1Q12796 327 aaPredicted RBP8.9□□□□□ -0.98
RPUSD3-204ENST00000424438 PAPPA-AS1Q5QFB9 102 aa8.9□□□□□ -0.98
RPUSD3-204ENST00000424438 MRPL54Q6P161 138 aaKnown RBP8.9□□□□□ -0.98
RPUSD3-204ENST00000424438 CDKN2A-AS1Q9UH64 79 aa8.89□□□□□ -0.99
RPUSD3-204ENST00000424438 ORMDL2Q53FV1 153 aa8.88□□□□□ -0.99
RPUSD3-204ENST00000424438 Q8N8P6 123 aa8.88□□□□□ -0.99
RPUSD3-204ENST00000424438 ZC2HC1BQ5TFG8 222 aa8.87□□□□□ -0.99
RPUSD3-204ENST00000424438 NKAPP1Q8N9T2 125 aa8.87□□□□□ -0.99
RPUSD3-204ENST00000424438 MAP1LC3AQ9H492 121 aa8.87□□□□□ -0.99
RPUSD3-204ENST00000424438 G0S2P27469 103 aa8.86□□□□□ -0.99
RPUSD3-204ENST00000424438 KRTAP13-3Q3SY46 172 aa8.86□□□□□ -0.99
RPUSD3-204ENST00000424438 PDZD11Q5EBL8 140 aa8.86□□□□□ -0.99
RPUSD3-204ENST00000424438 TIMM17AQ99595 171 aa8.86□□□□□ -0.99
RPUSD3-204ENST00000424438 GEMIN7Q9H840 131 aaKnown RBP8.86□□□□□ -0.99
RPUSD3-204ENST00000424438 GAGE10A6NGK3 116 aa8.85□□□□□ -0.99
RPUSD3-204ENST00000424438 SMIM1B2RUZ4 78 aa8.85□□□□□ -0.99
RPUSD3-204ENST00000424438 GNB1LQ9BYB4 327 aa8.85□□□□□ -0.99
RPUSD3-204ENST00000424438 IGLV5-45A0A087WSX0 123 aa8.84□□□□□ -0.99
RPUSD3-204ENST00000424438 LINC00337Q8N6G1 96 aa8.84□□□□□ -0.99
RPUSD3-204ENST00000424438 COX7B2Q8TF08 81 aa8.83□□□□□ -1
RPUSD3-204ENST00000424438 PLEKHB2Q96CS7 222 aa8.83□□□□□ -1
RPUSD3-204ENST00000424438 SEC61BP60468 96 aaKnown RBP8.82□□□□□ -1
RPUSD3-204ENST00000424438 NXT2Q9NPJ8 142 aaKnown RBP8.82□□□□□ -1
RPUSD3-204ENST00000424438 LOC389332A0A1B0GUA5 103 aa8.81□□□□□ -1
RPUSD3-204ENST00000424438 TINCRA0A1B0GVN0 87 aa8.81□□□□□ -1
RPUSD3-204ENST00000424438 C9JQL5 133 aa8.81□□□□□ -1
RPUSD3-204ENST00000424438 C3orf22Q8N5N4 141 aa8.81□□□□□ -1
RPUSD3-204ENST00000424438 TMEM126AQ9H061 195 aa8.81□□□□□ -1
RPUSD3-204ENST00000424438 IGKV2-28A0A075B6P5 120 aa8.8□□□□□ -1
RPUSD3-204ENST00000424438 IGKV2D-28P01615 120 aa8.8□□□□□ -1
RPUSD3-204ENST00000424438 PRLHP81277 87 aa8.8□□□□□ -1
RPUSD3-204ENST00000424438 FAM19A1Q7Z5A9 133 aa8.79□□□□□ -1
RPUSD3-204ENST00000424438 TOMM6Q96B49 74 aa8.79□□□□□ -1
RPUSD3-204ENST00000424438 KRTAP4-1Q9BYQ7 146 aa8.79□□□□□ -1
RPUSD3-204ENST00000424438 LINC01549A6NIU2 74 aa8.78□□□□□ -1
RPUSD3-204ENST00000424438 VPREB1P12018 145 aa8.78□□□□□ -1
RPUSD3-204ENST00000424438 PEA15Q15121 130 aa8.78□□□□□ -1
RPUSD3-204ENST00000424438 ERASQ7Z444 233 aa8.78□□□□□ -1
RPUSD3-204ENST00000424438 M0R378 163 aa8.77□□□□□ -1.01
RPUSD3-204ENST00000424438 AKAP14Q86UN6 197 aa8.77□□□□□ -1.01
RPUSD3-204ENST00000424438 KRTAP9-7A8MTY7 169 aa8.76□□□□□ -1.01
RPUSD3-204ENST00000424438 C4orf48Q5BLP8 95 aa8.76□□□□□ -1.01
RPUSD3-204ENST00000424438 CBLN2Q8IUK8 224 aa8.76□□□□□ -1.01
RPUSD3-204ENST00000424438 ATP5LO75964 103 aa8.75□□□□□ -1.01
RPUSD3-204ENST00000424438 SPINK1P00995 79 aa8.75□□□□□ -1.01
RPUSD3-204ENST00000424438 RPL24P83731 157 aaKnown RBP8.75□□□□□ -1.01
RPUSD3-204ENST00000424438 SPRR4Q96PI1 79 aa8.75□□□□□ -1.01
RPUSD3-204ENST00000424438 MRPL18Q9H0U6 180 aaKnown RBP8.75□□□□□ -1.01
RPUSD3-204ENST00000424438 ZNF706Q9Y5V0 76 aaPredicted RBP8.75□□□□□ -1.01
RPUSD3-204ENST00000424438 TMEM238C9JI98 176 aa8.74□□□□□ -1.01
RPUSD3-204ENST00000424438 SCO1O75880 301 aa8.74□□□□□ -1.01
RPUSD3-204ENST00000424438 RAB5BP61020 215 aa8.74□□□□□ -1.01
RPUSD3-204ENST00000424438 RPS29P62273 56 aaKnown RBP8.74□□□□□ -1.01
RPUSD3-204ENST00000424438 A0A1B0GVG6 124 aa8.73□□□□□ -1.01
RPUSD3-204ENST00000424438 COX17Q14061 63 aa8.73□□□□□ -1.01
RPUSD3-204ENST00000424438 CFC1BP0CG36 223 aa8.72□□□□□ -1.01
RPUSD3-204ENST00000424438 SCGB3A1Q96QR1 104 aa8.72□□□□□ -1.01
RPUSD3-204ENST00000424438 SND1-IT1Q9HBX3 110 aa8.72□□□□□ -1.01
RPUSD3-204ENST00000424438 IGLV5-39A0A0G2JS06 123 aa8.71□□□□□ -1.02
RPUSD3-204ENST00000424438 LCE2CQ5TA81 110 aa8.71□□□□□ -1.02
RPUSD3-204ENST00000424438 FAM19A2Q8N3H0 131 aa8.71□□□□□ -1.02
RPUSD3-204ENST00000424438 H3BRM9 83 aa8.7□□□□□ -1.02
RPUSD3-204ENST00000424438 XP32Q5T750 250 aa8.7□□□□□ -1.02
RPUSD3-204ENST00000424438 Q8NBF4 154 aa8.7□□□□□ -1.02
RPUSD3-204ENST00000424438 HIGD2AQ9BW72 106 aa8.7□□□□□ -1.02
RPUSD3-204ENST00000424438 CST9LQ9H4G1 147 aa8.7□□□□□ -1.02
RPUSD3-204ENST00000424438 NDUFA12Q9UI09 145 aa8.7□□□□□ -1.02
RPUSD3-204ENST00000424438 LINC01546A6NGU7 62 aa8.69□□□□□ -1.02
RPUSD3-204ENST00000424438 SPINK8P0C7L1 97 aa8.69□□□□□ -1.02
RPUSD3-204ENST00000424438 DAND5Q8N907 189 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms