RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 OR10D4PQ8NGN7 298 aa9.5□□□□□ -0.89
USB1-202ENST00000423271 NUPR1O60356 82 aa9.49□□□□□ -0.89
USB1-202ENST00000423271 HIST1H2BKO60814 126 aa9.49□□□□□ -0.89
USB1-202ENST00000423271 HIST1H2BJP06899 126 aa9.49□□□□□ -0.89
USB1-202ENST00000423271 HIST1H2BOP23527 126 aa9.49□□□□□ -0.89
USB1-202ENST00000423271 HIST1H2BBP33778 126 aa9.49□□□□□ -0.89
USB1-202ENST00000423271 NDUFA6P56556 154 aa9.49□□□□□ -0.89
USB1-202ENST00000423271 HIST1H2BDP58876 126 aa9.49□□□□□ -0.89
USB1-202ENST00000423271 HIST1H2BCP62807 126 aa9.49□□□□□ -0.89
USB1-202ENST00000423271 HERVK_113P63121 156 aa9.49□□□□□ -0.89
USB1-202ENST00000423271 HIST2H2BEQ16778 126 aa9.49□□□□□ -0.89
USB1-202ENST00000423271 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.49□□□□□ -0.89
USB1-202ENST00000423271 HIST1H2BHQ93079 126 aa9.49□□□□□ -0.89
USB1-202ENST00000423271 HIST1H2BNQ99877 126 aa9.49□□□□□ -0.89
USB1-202ENST00000423271 HIST1H2BMQ99879 126 aa9.49□□□□□ -0.89
USB1-202ENST00000423271 GEMIN7Q9H840 131 aaKnown RBP9.49□□□□□ -0.89
USB1-202ENST00000423271 LINC00474Q9P2X8 69 aa9.49□□□□□ -0.89
USB1-202ENST00000423271 CDKN2A-AS1Q9UH64 79 aa9.49□□□□□ -0.89
USB1-202ENST00000423271 PKIGQ9Y2B9 76 aa9.49□□□□□ -0.89
USB1-202ENST00000423271 TINCRA0A1B0GVN0 87 aa9.48□□□□□ -0.89
USB1-202ENST00000423271 PTTG1IPP53801 180 aa9.48□□□□□ -0.89
USB1-202ENST00000423271 LINC01561Q8N1V8 128 aa9.48□□□□□ -0.89
USB1-202ENST00000423271 CAMK2N2Q96S95 79 aa9.48□□□□□ -0.89
USB1-202ENST00000423271 LOC107984640A0A0U1RRK4 108 aa9.47□□□□□ -0.89
USB1-202ENST00000423271 GAGE2BQ13066 116 aa9.47□□□□□ -0.89
USB1-202ENST00000423271 LINC00469Q8N7U9 141 aa9.47□□□□□ -0.89
USB1-202ENST00000423271 C2orf48Q96LS8 159 aa9.47□□□□□ -0.89
USB1-202ENST00000423271 KIAA0087Q14695 138 aa9.46□□□□□ -0.9
USB1-202ENST00000423271 IFI27L1Q96BM0 104 aa9.46□□□□□ -0.9
USB1-202ENST00000423271 IGLV5-45A0A087WSX0 123 aa9.45□□□□□ -0.9
USB1-202ENST00000423271 IGLC3P0DOY3 106 aa9.45□□□□□ -0.9
USB1-202ENST00000423271 PLA2G2DQ9UNK4 145 aa9.45□□□□□ -0.9
USB1-202ENST00000423271 LEPROTL1O95214 131 aa9.44□□□□□ -0.9
USB1-202ENST00000423271 PACRGQ96M98 296 aaPredicted RBP9.44□□□□□ -0.9
USB1-202ENST00000423271 A0A1W2PNN7 141 aa9.43□□□□□ -0.9
USB1-202ENST00000423271 SMIM1B2RUZ4 78 aa9.43□□□□□ -0.9
USB1-202ENST00000423271 RPL18AQ02543 176 aaKnown RBP9.43□□□□□ -0.9
USB1-202ENST00000423271 C10orf25Q5T742 122 aa9.43□□□□□ -0.9
USB1-202ENST00000423271 TOMM7Q9P0U1 55 aa9.43□□□□□ -0.9
USB1-202ENST00000423271 TRAV12-1A0A0B4J245 112 aa9.42□□□□□ -0.9
USB1-202ENST00000423271 C11orf86A6NJI1 115 aa9.42□□□□□ -0.9
USB1-202ENST00000423271 F8WDY8 70 aa9.42□□□□□ -0.9
USB1-202ENST00000423271 NDUFA1O15239 70 aa9.42□□□□□ -0.9
USB1-202ENST00000423271 SPINK8P0C7L1 97 aa9.42□□□□□ -0.9
USB1-202ENST00000423271 FABP4P15090 132 aa9.42□□□□□ -0.9
USB1-202ENST00000423271 ZNF22P17026 224 aaPredicted RBP9.42□□□□□ -0.9
USB1-202ENST00000423271 UNQ6190/PRO20217Q6UXQ8 127 aa9.42□□□□□ -0.9
USB1-202ENST00000423271 CHTOPQ9Y3Y2 248 aaKnown RBP9.42□□□□□ -0.9
USB1-202ENST00000423271 PRSS2P07478 247 aa9.41□□□□□ -0.9
USB1-202ENST00000423271 C2orf82Q6UX34 121 aa9.41□□□□□ -0.9
USB1-202ENST00000423271 MRPL35Q9NZE8 188 aaKnown RBP9.41□□□□□ -0.9
USB1-202ENST00000423271 H0Y8G0 127 aa9.4□□□□□ -0.9
USB1-202ENST00000423271 H3BRM9 83 aa9.4□□□□□ -0.9
USB1-202ENST00000423271 SMCPP49901 116 aaPredicted RBP9.4□□□□□ -0.9
USB1-202ENST00000423271 RNF151Q2KHN1 245 aa9.4□□□□□ -0.9
USB1-202ENST00000423271 C9orf116Q5BN46 136 aaPredicted RBP9.4□□□□□ -0.9
USB1-202ENST00000423271 Q6ZRP5 223 aa9.4□□□□□ -0.9
USB1-202ENST00000423271 Q8IZM0 81 aa9.4□□□□□ -0.9
USB1-202ENST00000423271 C6orf48Q9UBA6 75 aa9.4□□□□□ -0.9
USB1-202ENST00000423271 C6orf226Q5I0X4 101 aa9.39□□□□□ -0.91
USB1-202ENST00000423271 HSPB8Q9UJY1 196 aa9.39□□□□□ -0.91
USB1-202ENST00000423271 COA6Q5JTJ3 125 aaKnown RBP9.38□□□□□ -0.91
USB1-202ENST00000423271 TMEM170BQ5T4T1 132 aa9.38□□□□□ -0.91
USB1-202ENST00000423271 COX7B2Q8TF08 81 aa9.38□□□□□ -0.91
USB1-202ENST00000423271 LINC01600Q96MT4 127 aa9.38□□□□□ -0.91
USB1-202ENST00000423271 LRP2P98164 4655 aa9.37□□□□□ -0.91
USB1-202ENST00000423271 F8VRH5 84 aa9.37□□□□□ -0.91
USB1-202ENST00000423271 CKS1BP61024 79 aa9.37□□□□□ -0.91
USB1-202ENST00000423271 SRSF9Q13242 221 aaKnown RBP eCLIP9.37□□□□□ -0.91
USB1-202ENST00000423271 ODF1Q14990 250 aa9.37□□□□□ -0.91
USB1-202ENST00000423271 SPINK6Q6UWN8 80 aa9.37□□□□□ -0.91
USB1-202ENST00000423271 PHF5AQ7RTV0 110 aaKnown RBP9.37□□□□□ -0.91
USB1-202ENST00000423271 IGLV5-39A0A0G2JS06 123 aa9.36□□□□□ -0.91
USB1-202ENST00000423271 TRBV30A0A0K0K1B3 111 aa9.36□□□□□ -0.91
USB1-202ENST00000423271 TMEM238LA0A1B0GVL6 79 aa9.36□□□□□ -0.91
USB1-202ENST00000423271 FAM168BA1KXE4 195 aa9.35□□□□□ -0.91
USB1-202ENST00000423271 PSORS1C2Q9UIG4 136 aa9.35□□□□□ -0.91
USB1-202ENST00000423271 TLX1NBP0CAT3 122 aa9.34□□□□□ -0.91
USB1-202ENST00000423271 CXCL5P42830 114 aa9.34□□□□□ -0.91
USB1-202ENST00000423271 MAP1LC3CQ9BXW4 147 aa9.34□□□□□ -0.91
USB1-202ENST00000423271 TMEM223A0PJW6 202 aa9.33□□□□□ -0.92
USB1-202ENST00000423271 REG3GQ6UW15 175 aa9.33□□□□□ -0.92
USB1-202ENST00000423271 PMCHL2Q9BQD1 86 aa9.33□□□□□ -0.92
USB1-202ENST00000423271 GAGE2EQ4V326 116 aa9.32□□□□□ -0.92
USB1-202ENST00000423271 GAGE2DQ9UEU5 116 aa9.32□□□□□ -0.92
USB1-202ENST00000423271 SYS1-DBNDD2H3BUS1 97 aa9.31□□□□□ -0.92
USB1-202ENST00000423271 KRTAP10-8P60410 259 aa9.31□□□□□ -0.92
USB1-202ENST00000423271 C1orf137Q5JT78 98 aa9.31□□□□□ -0.92
USB1-202ENST00000423271 FAM19A5Q7Z5A7 132 aaPredicted RBP9.31□□□□□ -0.92
USB1-202ENST00000423271 KRTAP11-1Q8IUC1 163 aa9.31□□□□□ -0.92
USB1-202ENST00000423271 KRTAP7-1Q8IUC3 87 aa9.31□□□□□ -0.92
USB1-202ENST00000423271 NDUFC2-KCTD14E9PQ53 114 aa9.3□□□□□ -0.92
USB1-202ENST00000423271 DPM2O94777 84 aa9.3□□□□□ -0.92
USB1-202ENST00000423271 PLNP26678 52 aa9.3□□□□□ -0.92
USB1-202ENST00000423271 IGKCP01834 107 aa9.28□□□□□ -0.92
USB1-202ENST00000423271 C3orf79P0CE67 100 aa9.27□□□□□ -0.93
USB1-202ENST00000423271 C9orf129Q5T035 196 aaKnown RBP9.27□□□□□ -0.93
USB1-202ENST00000423271 PET117Q6UWS5 81 aa9.27□□□□□ -0.93
USB1-202ENST00000423271 M0QXV9 152 aa9.26□□□□□ -0.93
USB1-202ENST00000423271 IGLV7-43P04211 117 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms